Resumo Neste estudo, bactérias degradadoras de óleo descobertas em peixes que vivem perto dos portos de petróleo em Karachi, no Paquistão, foram caracterizadas. As bactérias isoladas da pele, guelras e intestinos dos peixes podem consumir petróleo bruto como fonte de carbono e energia. No total, 36 isolados foram testados usando Agar Nutriente (NA) e meio MSA com diferentes concentrações de óleo bruto (0,2%, 0,5%, 0,7%, 1%, 2% e 5%) e 4 de 36 isolados (dois Gram positivos e duas bactérias Gram negativas) foram selecionadas para posterior identificação. O sequenciamento do gene 16S rRNA revelou que os isolados estão relacionados a Bacillus velezensis, Bacillus flexus, Pseudomonas brenneri e Pseudomonas azotoforman. O potencial de degradação do óleo dessas bactérias foi caracterizado pela análise de GC-MS da degradação dos componentes do óleo no óleo cru, bem como no óleo do motor. Descobrimos que um (2, 6, 10, 14-tetrametilpentadecano) de 42 componentes do óleo cru foi totalmente eliminado e os outros componentes do óleo foram reduzidos. Além disso, 26 dos 42 componentes do óleo do motor foram totalmente eliminados e o restante corrigido. Juntos, esses estudos identificam que B. velezensis, B. flexus, P. brenneri e P. azotoforman têm alto potencial de degradação de óleo, o que pode ser útil para a degradação de poluentes de óleo e outras aplicações comerciais.

Abstract In this study, oil degrading bacteria discovered from fish living near the oil ports at Karachi in Pakistan were characterized. The bacteria isolated from skin, gills, and gut in fish could consume crude oil as a source of carbon and energy. Total 36 isolates were tested using Nutrient Agar (NA) and MSA media with different crude oil concentrations (0.2%, 0.5%, 0.7%, 1%, 2%, and 5%) and 4 out of 36 isolates (two Gram positive and two Gram negative bacteria) were selected for further identification. 16S rRNA gene sequencing revealed that the isolates are related to Bacillus velezensis, Bacillus flexus, Pseudomonas brenneri and Pseudomonas azotoforman. Oil degrading potential of these bacteria was characterized by GC-MS analysis of degradation of oil components in crude oil as well as engine oil. We found that one (2, 6, 10, 14-Tetramethylpentadecane) out of 42 components in the crude oil was fully eliminated and the other oil components were reduced. In addition, 26 out of 42 oil components in the engine oil, were fully eliminated and the rest were amended. Taken together, these studies identify that B. velezensis, B. flexus, P. brenneri and P. azotoforman have high oil degrading potential, which may be useful for degradation of oil pollutants and other commercial applications.

Abstract Satsuma mandarin (Citrus unshiu Marc.), Hallabong [(C. unshiu Marc. × C. sinensis Osb.)×(C. reticulata Blanco)], Cheonhyehyang [((C. unshiu×C. sinensis)×C. reticulata)×(C. reticulate×C. sinensis)], and Redhyang (citrus hybrid 'Kanpei), which are citrus hybrids, are mostly consumed in Korea. The flavor of citrus peel depends on the composition and content of volatile essential oils. Limonene, γ-terpinene, β-myrcene, linalool, ocimene, octanal, and sabinene were found to be the main components in Satsuma mandarin, Hallabong, Cheonhyehyang, Redhyang, and orange (C. sinensis Osb.) peel essential oils. Limonene was the main component (82.05–91.84%) of all citrus peel essential oils. γ-Terpinene was present in a particularly high content (8.09%) in the essential oil of Satsuma mandarin peel. Linalool was found in the highest proportion (4.39%) in the essential oil of Cheonhyehyang peels. β-Ocymene had the highest concentration (6.50%) in Redhyang peel essential oil. Citrus peel essential oils showed slight antibacterial activity against Salmonella choleraesuis (S. choleraesuis), Bacillus cereus (B. cereus), Listeria monocytogenes (L. monocytogenes), Staphylococcus aureus (S. aureus), and Pseudomonas aeruginosa (P. aeruginosa). Cheonhyehyang peel essential oil showed the highest antibacterial activity against all foodborne pathogens. Additionally, B. cereus was the most sensitive, and S. aureus was the most resistant to the Cheonhyehyang peel essential oil.

This study used 209 public single nucleotide polymorphism (SNP) arrays for 151 candidate genes of pigs to analyse their association with nine blood component traits (insulin-like growth factor-I, insulin, immuno globulin, lymphocyte, monocyte, eosinophil, basophil, neutrophil and atypical lymph) in 209 Korean native pigs and Yorkshire F2 hybrids. Of these, 52 SNPs in 49 candidate genes showed significant association with one or more blood component traits. Nineteen of these SNPs were found to be present in blood component QTL regions. The 49 candidate genes corresponding to 52 SNPs with significant effects were detected and used for gene ontology analysis to understand the function of the candidate genes at molecular level. Based on functional classification (biological process, cellular components, and molecular function) of annotated candidates, 34 candidate genes (11 genes of IGF-1, 9 of IS, 9 of IG, 6 of NP, and 3 of EP) were detected. Additionally, eight genes (PSMB4, PSME3, MAPKAPK3, CTLA4, CUL7, GGT1, IDH3B, and RXRB) interacting with four immune pathways (immune system, adaptive immune system, Class I MHC-mediated antigen processing and presentation, and antigen processing: ubiquitination and proteasome degradation) were found through pathway and network analyses. The eight candidate genes identified in this study are included in class I MHC-mediated antigen pathway, which is an important factor that determines the success of organ transplantation in addition to the improvement of diseases and immunity of pigs. Therefore, these genes can potentially be used in heterogeneous organ research in future research.

This study evaluated the effects of palm kernel expellers in growing diets on growth performance, nutrient digestibility, and carcass and meat quality characteristics of growing-finishing pigs. A total of 88 growing pigs were randomly assigned to two dietary treatment groups. The control diet (CON) was a typical growing or finishing diet based on corn-soybean meal, and the treatment diet (PKE) was formulated by replacing CON with 20% palm kernel expellers. The PKE-CON group was fed the PKE diet during the growing period (six weeks) and the CON diet during the finishing period (12 weeks). The CON-CON group was fed the CON diets during both growing and finishing periods. The PKE-CON group showed significantly depressed growth performance and lower nutrient digestibility than the CON-CON group during the growing period. However, after feeding the typical finisher diets during the finishing period, the PKE-CON group showed no difference in growth performance in comparison with the CON-CON group during both the finishing and overall experimental periods. In addition, carcass and meat quality characteristics were not significantly different between the PKE-CON and the CON-CON groups. The results of this study imply that palm kernel expellers can be an alternative ingredient in the growing diets of growing-finishing pigs if the combined feeding strategy (PKE for the growing period and CON for the finishing period) is used.

A study was conducted to investigate the effects of dietary protease supplementation on growth performance and carcass characteristics of growing-finishing pigs that started with a lower bodyweight than pigs in the control group. A total of 96 growing pigs (initial bodyweight (BW) 31.6 ± 2.97 kg) were allotted to two dietary treatments (48 pigs/treatment, 8 pigs/pen) with different initial BW (34.37 vs. 28.78 kg). The dietary treatments were a control diet (CON), based on maize and soybean meal (grower diets) and wheat (finisher diets), and a protease diet (PRO), which was the CON diet to which 0.02% protease was added. Pigs were fed these dietary treatments (high BW-CON, low BW-PRO) for 12 weeks, comprising six weeks growing and six weeks finishing. In the growing period, PRO had higher average daily gain (ADG) and gain to feed (G:F) ratio than CON. The significant difference in bodyweight that was observed at the beginning of the experiment between the treatment groups was still observed at the end of the growing period. In the finishing period, PRO had reduced feed intake, average daily feed intake (ADFI), and increased G:F ratio compared with CON. At the end of the experiment, there was no significant difference in BW between the treatment groups as a result of lower feed intake and ADFI and higher ADG and G:F ratio. In addition, there were no differences in carcass characteristics between the groups. Therefore, standalone protease supplementation may positively affect the growth performance of growing-finishing pigs through improved feed efficiency without negative effects on carcass characteristics.

SUMMARY P450 oxidoreductase deficiency (PORD) is a variant of congenital adrenal hyperplasia that is caused by POR gene mutations. The POR gene encodes a flavor protein that transfers electrons from nicotinamide adenine dinucleotide phosphate (NADPH) to all microsomal cytochrome P450 type II (including 21-hydroxylase, 17α-hydroxylase 17,20 lyase and aromatase), which is fundamental for their enzymatic activity. POR mutations cause variable impairments in steroidogenic enzyme activities that result in wide phenotypic variability ranging from 46,XX or 46,XY disorders of sexual differentiation, glucocorticoid deficiency, with or without skeletal malformations similar to Antley-Bixler syndrome to asymptomatic newborns diagnosed during neonatal screening test. Little is known about the PORD long-term evolution. We described a 46,XX patient with mild atypical genitalia associated with severe bone malformation, who was diagnosed after 13 years due to sexual infantilism. She developed large ovarian cysts and late onset adrenal insufficiency during follow-up, both of each regressed after hormone replacement therapies. We also described a late surgical approach for the correction of facial hypoplasia in a POR patient.

Fundamento: Alertar para o diagnóstico da síndrome da deleção 22q11.2 (SD 22q11.2) em pacientes com cardiopatias congênitas. Objetivo: Descrever as principais cardiopatias, alterações fenotípicas, metabólicas e imunológicas em uma série de 60 pacientes com a SD22q11.2. Métodos: Foram incluídos 60 pacientes com SD22q11.2 avaliados entre 2007 e 2013 (M:F = 1,3; idades entre 14 dias a 20 anos e 3 meses) em um centro pediátrico de referência para imunodeficiências primárias. O diagnóstico foi feito pela detecção da microdeleção 22q11.2 através de FISH (n = 18) e/ou MLPA (n = 42), associados a dados clínicos e laboratoriais. Foram analisadas as cardiopatias, aspectos fenotípicos evolutivos da fácies, a hipocalcemia e alterações imunológicas associadas. Resultados: Cardiopatias congênitas ocorreram em 77% dos casos, sendo que a tetralogia de Fallot ocorreu em 38,3%. Correção cirúrgica da cardiopatia foi realizada em 34 pacientes. Os dismorfismos craniofaciais foram detectados em 41 pacientes: face (60%) e/ou nariz alongados (53,3%), fenda palpebral estreita (50%), orelhas displásicas com hiperdobramento (48,3%), lábios finos (41,6%), dedos alongados (38,3%) e baixa estatura (36,6%). Hipocalcemia foi observada em 64,2% com redução do nível de paratormônio (PTH) em 25,9%. Observou-se número reduzido de linfócitos totais, CD4 e CD8 em 40%, 53,3%, e 33,3%, respectivamente. Detectou-se hipogamaglobulinemia em um paciente e redução das concentrações de imunoglobulina M (IgM) em outros dois pacientes. Conclusão: Deve-se suspeitar da SD22q11.2 em todos os portadores de cardiopatia congênita com hipocalcemia e/ou dismorfismos faciais, ressaltando-se que muitas dessas alterações podem ser evolutivas. A microdeleção 22q11.2 deve ser confirmada por testes moleculares em todos os pacientes.

Background: To alert for the diagnosis of the 22q11.2 deletion syndrome (22q11.2DS) in patients with congenital heart disease (CHD). Objective: To describe the main CHDs, as well as phenotypic, metabolic and immunological findings in a series of 60 patients diagnosed with 22q11.2DS. Methods: The study included 60 patients with 22q11.2DS evaluated between 2007 and 2013 (M:F=1.3, age range 14 days to 20 years and 3 months) at a pediatric reference center for primary immunodeficiencies. The diagnosis was established by detection of the 22q11.2 microdeletion using FISH (n = 18) and/or MLPA (n = 42), in association with clinical and laboratory information. Associated CHDs, progression of phenotypic facial features, hypocalcemia and immunological changes were analyzed. Results: CHDs were detected in 77% of the patients and the most frequent type was tetralogy of Fallot (38.3%). Surgical correction of CHD was performed in 34 patients. Craniofacial dysmorphisms were detected in 41 patients: elongated face (60%) and/or elongated nose (53.3%), narrow palpebral fissure (50%), dysplastic, overfolded ears (48.3%), thin lips (41.6%), elongated fingers (38.3%) and short stature (36.6%). Hypocalcemia was detected in 64.2% and decreased parathyroid hormone (PTH) level in 25.9%. Decrease in total lymphocytes, CD4 and CD8 counts were present in 40%, 53.3% and 33.3%, respectively. Hypogammaglobulinemia was detected in one patient and decreased concentrations of immunoglobulin M (IgM) in two other patients. Conclusion: Suspicion for 22q11.2DS should be raised in all patients with CHD associated with hypocalcemia and/or facial dysmorphisms, considering that many of these changes may evolve with age. The 22q11.2 microdeletion should be confirmed by molecular testing in all patients.

Objectives: To compare the concordance of prostate cancer (PCa) laterality between the extended transperineal (TP) or transrectal (TR) prostate biopsy (BP) and radical prostatectomy (RP) specimens. To identify predictors of laterality agreement between BP and RP. Materials and Methods: Data from 533 consecutive patients with PCa (278 TP and 255 TR-diagnosed) treated with RP were analyzed. A 12-core technique was used for both TP and TR biopsies. Additional cores were obtained when necessary. Results: Overall, the percentage of agreement of PCa laterality between BP and RP was 60% (K = 0.27, p < 0.001). However, the RP confirmation of unilaterality at BP was obtained in just 33% of the cases. Considering the concordance on bilaterality as the “target” of our analysis, the sensitivity and specificity were 54.3% and 98.2%, respectively, with TP and 47.5% and 92.5%, respectively with TR. Focusing on patients with unilaterality at biopsy, none of the evaluated preoperative variables (biopsy technique, age, total positive biopsy cores, PSA, prostate volume, Gleason score on biopsy) were able to predict RP bilaterality in the multivariate analyses. Conclusions: Most of the patients with unilateral involvement at BP harbored bilateral PCa after RP. TR and TP biopsy showed no difference in their capacity to predict the concordance of tumor laterality at RP. None of the preoperative evaluated variables can predict the tumor laterality at RP. Using BP unilaterality to include patients in focal therapy (FT) protocols may hinder the oncologic efficacy of FT.

The chicken-type lysozyme of the insect Spodoptera litura (SLLyz) is a polypeptide of 121 amino acids containing four disulfide bridges and 17 rare codons and participates in innate defense as an anti-bacterial enzyme. The recombinant S. litura lysozyme (rSLLyz) expressed as a C-terminal fusion protein with glutathione S-transferase (GST) in Rosetta(DE3) Singles. The protein was produced as an inclusion body which was solubilized in 8 M urea, renatured by on-column refolding, and purified by reversed-phase chromatography to 95% purity. The purified rSLLyz demonstrated antibacterial activity against B. megaterium confirmed by inhibition zone assay. The overexpression and refolding strategy described in this study will provide a reliable technique for maximizing production and purification of proteins expressed as inclusion bodies in E. coli.

The experiment was conducted around south of the Azores islands, in the middle eastern part of the northern-Atlantic basin. The experimental area was situated between 31°N-38°N and 21°W-28°W. The experiment was performed in order to improve our knowledge of ocean-atmosphere interactions from the local-scale to the meso-scale. The sea surface temperature remotely measured by aircraft was corrected considering the radiation flux divergence. From the descending IR flux in function of the difference between the surface temperatures measured from the ship and the aircraft (SSTshipSSTaircraft), the difference decreases when the IR flux increases. The sea surface temperature was corrected of the radiation flux divergence of the atmosphere between the sea surface and the flight level. The cloudness plays an important role in this correction. The comparison between SST of the ship and the SST of the aircraft shows a difference of 1°C on average which is affected of the descending infrared flux (0.25°C per 100 m)

As mucopolissacaridoses (MPS) constituem um grupo de erros inatos do metabolismo lisossomal dos glicosaminoglicanos (GAG) bastante heterogêneo. A importância das MPS levou-nos a relatar as características de 19 casos. MÉTODO: Realizamos uma avaliação clínica, radiológica e bioquímica, incluindo estudos enzimáticos, que nos permitiram estabelecer o diagnóstico definitivo em 19 casos. RESULTADOS: Nem todos os pacientes apresentaram níveis elevados de GAG na urina, devendo os ensaios enzimáticos serem realizados em todos os pacientes com forte suspeita clínica. O diagnóstico foi estabelecido em média aos 48 meses de idade e os casos, após amplo estudo clínico, radiológico e bioquímico, foram classificados como: Hurler -- MPS I (1 caso); Hunter -- MPS II (2 casos); Sanfilippo -- MPS III (2 casos); Morquio -- MPS IV (4 casos); Maroteaux-Lamy -- MPS VI (9 casos); e Sly -- MPS VI (1 caso). DISCUSSÃO: A proporção relativamente alta de MPS VI (Maroteaux-Lamy) contrasta com a maioria dos dados da literatura e pode expressar uma variabilidade populacional.

The mucopolysaccharidoses (MPS) are a heterogeneous group of inborn errors of lysosomal glycosaminoglycan (GAG) metabolism. The importance of this group of disorders among the inborn errors of metabolism led us to report 19 cases. METHOD: We performed clinical, radiological, and biochemical evaluations of the suspected patients, which allowed us to establish a definite diagnosis in 19 cases. RESULTS: Not all patients showed increased GAG levels in urine; enzyme assays should be performed in all cases with strong clinical suspicion. The diagnosis was made on average at the age of 48 months, and the 19 MPS cases, after a full clinical, radiological, and biochemical study, were classified as follows: Hurler -- MPS I (1 case); Hunter -- MPS II (2 cases); Sanfilippo -- MPS III (2 cases); Morquio -- MPS IV (4 cases); Maroteaux-Lamy -- MPS VI (9 cases); and Sly -- MPS VII (1 case). DISCUSSION: The high relative frequency of Maroteaux-Lamy disease contrasts with most reports in the literature and could express a population variability.

OBJETIVO: Este estudo analisou anastomoses intestinais por sutura manual e por compressão com anel biofragmentável, sob retardo cicatricial pela administração parenteral de corticosteróides. MATERIAL E MÉTODOS: Vinte cães, entre 15 e 20 kg, foram divididos em grupos controle e teste, este submetido à administração intramuscular de hemissuccinato de hidrocortisona, de 25 a 33 mg/kg/dia, do 30º dia pré-operatório ao 7º dia pós-operatório. Em ato cirúrgico, cada animal foi submetido a duas secções cólicas, com anastomoses por sutura manual em plano único extramucoso e por compressão com anel biofragmentável. Os espécimes foram sacrificados sete dias após o procedimento para avaliação das anastomoses. RESULTADOS: No pós-operatório ocorreram um óbito no grupo teste e dois óbitos no grupo controle por fístula não bloqueada nas anastomoses por compressão com anel. Houve, estatisticamente, incidência semelhante de aderências, fístulas, dilatação aferente e obstrução, nos métodos em comparação. À microscopia, houve deficiência de regeneração mucosa nas anastomoses por compressão. Análise histológica por computador evidenciou nas anastomoses por compressão, maior reação inflamatória, maior edema de submucosa e formação de cicatrizes alargadas. CONCLUSÕES: Com o anel biofragmentável, em anastomoses colocólicas sob retardo de cicatrização induzido por corticosteróides, foram obtidos resultados semelhantes aos da sutura manual quanto à incidência de complicações pós-operatórias; o anel, entretanto, determinou pior regeneração mucosa e maior reação inflamatória cicatricial.

BACKGROUND: This study analyzed intestinal anastomoses by manual suture and by compression with biofragmentable ring under delay of cicatrization administering parenteral corticoids. MATERIAL AND METHODS: Twenty dogs were divided into two groups: control and test, the latter submitted to intramuscular administration of hydrocortisone hemisuccinate, 25 to 33 mg/kg/day, on the 30th preoperative and 7th postoperative days. During surgery, each animal underwent two colon sections with anastomosis by manual suture in a single extramucous plane and compression with biofragmentable ring. The animals were sacrificed 7 days after the procedure to evaluate the anastomoses. RESULTS: In the postoperative period, one death occurred in the test group and two in the control group, caused by nonblocked fistula in the anastomoses by ring compression. Statistically, there was a similar incidence of adherences, fistulas, afferent dilatation and obstruction using comparison methods. On microscopy, deficiency in mucous regeneration of the anastomoses by compression was observed. Computerized histological analysis evidenced in the anastomoses by compression, a greater inflammatory reaction, greater edema of the submucous membrane and enlarged scars. CONCLUSIONS: It was concluded that, with the biofragmentable ring, in colonic anastomosis under delay of cicatrization induced by corticoids, similar results to manual suture regarding to postoperative complications incidence were obtained; ring, however, determined worse mucous regeneration and greater cicatricial inflammatory reaction.