Abstract The Nascentes do Rio Parnaíba National Park (NPNP), located in Brazilian Cerrado, protects portions of three river basins: headwaters of Parnaíba, a small portion in upper Tocantins-Araguaia, and tributaries of the middle section of the São Francisco. This protected area is in the boundaries of the states of Maranhão, Tocantins, Piauí, and Bahia, also known as MATOPIBA, a region that has established rapid agricultural expansion associated to land conflicts between corporate agriculture, family agriculture, protected areas, indigenous territories, and quilombola communities. The knowledge of the ichthyofauna in this region is scarce while the impacts on the aquatic environments are increasing. We made a survey of fishes in the NPNP and its surroundings areas, estimating richness, endemics, introduced and shared species between river basins. During 2014, 54 sampling sites were visited, 19 in the NPNP and 35 in the surrounding area. Ninety-five species, 51 genera, 22 families, and six orders were recorded, of which 38 (40%) are in the NPNP. One introduced species were recorded in the Parnaíba River basin and no endangered species were registered. Our data corroborate the importance of the network of protected areas for the preservation of Cerrado fishes, including some possibly undescribed and restricted-range species that may be threatened due to intense agricultural encroachment in the MATOPIBA region.

Resumo O Parque Nacional Nascentes do Rio Parnaíba (PNNP), localizado no Cerrado brasileiro, protege diferentes porções de três bacias hidrográficas, as cabeceiras do Parnaíba, uma pequena porção do alto rio Tocantins e tributários do trecho médio do São Francisco. Esta área protegida está localizada nos limites dos estados do Maranhão, Tocantins, Piauí e Bahia, também conhecida como MATOPIBA, região que tem apresentado rápida expansão agrícola associada a conflitos fundiários do agronegócio com agricultura familiar, áreas protegidas, territórios indígenas e comunidades quilombolas. O conhecimento da ictiofauna nessas regiões é escasso, embora os impactos sobre os ecossistemas aquáticos sejam crescentes. Assim, elaboramos um levantamento de peixes do PNNP e em seu entorno, identificando a riqueza, espécies endêmicas, introduzidas e compartilhadas entre bacias hidrográficas. Durante o ano de 2014 foram visitados 54 locais de amostragem, 19 no PNNP e 35 no entorno. Foram coletadas 95 espécies, 51 gêneros, 22 famílias e seis ordens, das quais 38 espécies (40%) estão no PNNP. Uma espécie introduzida foi registrada na bacia do rio Parnaíba e nenhuma espécie ameaçada de extinção foi registrada. Os dados aqui apresentados corroboram a importância da rede de áreas protegidas para a preservação dos peixes do Cerrado, com espécies potencialmente novas e de distribuição restrita, que podem estar ameaçadas devido à intensa expansão agrícola na região do MATOPIBA.

Abstract Introduction Although the envelope detection is a widely used method in medical ultrasound (US) imaging to demodulate the amplitude of the received echo signal before any back-end processing, novel hardware-based approaches have been proposed for reducing its computational cost and complexity. In this paper, we present the modeling and FPGA implementation of an efficient envelope detector based on a Hilbert Transform (HT) approximation for US imaging applications. Method The proposed model exploits both the symmetry and the alternating zero-valued coefficients of a HT finite impulse response (FIR) filter to generate the in-phase and quadrature components that are necessary for the envelope computation. The hardware design was synthesized for a Stratix IV FPGA, by using the Simulink and the integrated DSP Builder toolbox, and implemented on a Terasic DE4-230 board. The accuracy of our algorithm was evaluated by the normalized root mean square error (NRMSE) cost function in comparison with the conventional method based on the absolute value of the discrete-time analytic signal via FFT. Results An excellent agreement was achieved between the theoretical simulations with the experimental result. The NRMSE was 0.42% and the overall FPGA utilization was less than 1.5%. Additionally, the proposed envelope detector is capable of generating envelope data at every FPGA clock cycle after 19 (0.48 µs) cycles of latency. Conclusion The presented results corroborate the simplicity, flexibility and efficiency of our model for generating US envelope data in real-time, while reducing the hardware cost by up to 75%.

IntroductionIn this paper, we present the initial results of a fully programmable 128-channel FPGA and PC-based system that has been developed for medical ultrasound (US) imaging research in our University laboratory (Federal University of Technology - Paraná, Brazil).MethodsIn order to demonstrate the feasibility of the US research system, two applications involving unfocused plane wave transmission and conventional B-mode beamforming were evaluated using a commercial tissue-mimicking phantom and a 3.2 MHz 128-element convex array transducer.ResultsTesting results show that the hardware platform is able to synthesize arbitrary pulses up to 100 Vpp with second order harmonic distortion below 80 dB. For the first application, a 41-tap digital FIR bandpass filter was applied to the acquired RF echoes, sampled at 40 MHz with 12-bit resolution, to improve the noise suppression. In the second application, after offline apodization weighting, filtering, delay-and-sum processing, envelope detection, log compression and scan conversion, the reconstructed B-mode image is displayed over a 50 dB range.DiscussionThe presented results indicate that the open US imaging system can be used to support different ultrasonic transmission and reception strategies, which typically cannot be implemented in conventional data flow architectures that are mainly based on hardware.