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Drivers of floristic variation in biogeographic transitions: insights from the ecotone between the largest biogeographic domains of South America

ABSTRACT

Ecological transitions usually represent vulnerable ecosystems and high biodiversity. Investigating their drivers is important from both biogeographic and conservationist perspectives. One of these transitions is situated between the two largest biogeographic domains of South America - the Amazon and the Cerrado. We evaluated variation in tree floristic composition throughout this transition and assessed which factors explain this variation. We used 17,240 records of occurrences of 2,530 tree species from the NeotropTree database. We investigated variation in floristic composition using UPGMA cluster analysis with bootstrap resampling and NMDS ordination, and modeled the distribution of species in relation to environmental and spatial predictors by means of transformation-based Redundancy Canonical Analysis (tb-RDA) and variance partitioning. We found four general floristic groups: 1) flooded forests; 2) white sand dwarf-forests; 3) savannic and dwarf forests; and 4) non-flooded forest types. Floristic variation along the transition was influenced by the environment, especially variables related to fire and soil moisture, and by space, especially variables acting on broader scales. Correspondence between the environmental heterogeneity found throughout the transition and our results demonstrates once again the importance of conserving biogeographical transition zones in general, and the most comprehensive of South America in particular.

Keywords:
biogeographical patterns; ecological transitions; ecotone; floristic variation; tb-RDA; variance partitioning; vegetation types

Introduction

Transition zones among ecological communities, ecosystems and ecoregions, also known as ecotones (sensu latoRisser 1995Risser PG. 1995. The status of the science examining ecotones. BioScience 45: 318-325. ), may occur at multiple spatial scales, from vegetation types to biogeographic regions (Longman & Jeník 1992Longman KA, Jeník J. 1992. Forest-savanna boundaries: general considerations. In: Furley PA. (eds.) Nature and dynamics of forest-savanna boundaries. London, Chapman & Hall. p. 3-20.; Risser 1995Risser PG. 1995. The status of the science examining ecotones. BioScience 45: 318-325. ; Hufkens et al. 2009Hufkens K, Scheunders P, Ceulemans R. 2009. Ecotones in vegetation ecology: methodologies and definitions revisited. Ecological Research 24: 977-986.; Kark 2013Kark S. 2013. Effects of ecotones on biodiversity. In: Levin S. (eds.) Encyclopedia of biodiversity. Waltham, Academic Press. p. 142-148. ). Regardless of the scale, transition zones usually cover vulnerable ecosystems that are relevant to the organisms flow (Yarrow & Marín 2007Yarrow MM, Marín VH. 2007. Toward conceptual cohesiveness: a historical analysis of the theory and utility of ecological boundaries and transition zones. Ecosystems 10: 462-476.), with high biodiversity and presence of rare species (Smith et al. 2001Smith TB, Kark S, Schneider CJ, Wayne RK, Moritz C. 2001. Biodiversity hostspots and beyond: the need for preserving environmental transitions. Trends in Ecology and Evolution 16: 431.; Araújo 2002Araújo MB. 2002. Biodiversity hotspots and zones of ecological transition. Conservation Biology 16: 1662-1663.). Transitions between forests and savannas, for example, show a high variety of vegetation types, which have different characteristics, floristic composition and ecosystem functions (Bueno et al. 2018Bueno ML, Dexter KG, Pennington RT, et al. 2018. The environmental triangle of the Cerrado Domain: Ecological factors driving shifts in tree species composition between forests and savannas. Journal of Ecology 106: 2109-2120.; Dexter et al. 2018Dexter KG, Pennington RT, Oliveira-Filho AT, Bueno ML, Miranda PLS, Neves DN. 2018. Inserting tropical dry forests into the discussion on biome transitions in the tropics. Frontiers in Ecology and Evolution 6: 1-7.). It is precisely in such transitions that changes in the species distribution range have been increasingly observed, being associated not only to historical and isolation factors, but also to environmental heterogeneity as global changes intensify (Poloczanska et al. 2013Poloczanska ES, Brown CJ, Sydeman WJ, et al. 2013. Global imprint of climate change on marine life. Nature Climate Change 3: 919-925.; Neves et al. 2015Neves DM, Dexter KG, Pennington RT, Bueno ML, Oliveira-Filho AT. 2015. Environmental and historical controls of floristic composition across the South American Dry Diagonal Journal of Biogeography 42: 1566-1576.). In fact, more robust predictions about the impacts of climate change in biogeographical transitions require approaches that shed light on important ecological aspects (Sommer et al. 2018Sommer B, Beger M, Harrison PL, Babcock RC, Pandolfi JM. 2018. Differential response to abiotic stress controls species distributions at biogeographic transition zones. Ecography 41: 478-490.).

An extensive transitional region (> 6,000 km) is located between the two largest biogeographic domains of South America - Amazon, predominantly occupied by forests, and Cerrado, predominantly occupied by savannas -, presenting a complex mosaic of vegetation landscapes composed of different vegetation types, such as dense or open forests, deciduous, semideciduous or evergreen upland forests, riparian forests, savannas and rupestrian environments (Oliveira-Filho & Ratter 1995Oliveira-Filho AT, Ratter JA. 1995. A study of the origin of central Brazilian forests by the analysis of plant species distribution patterns. Edinburgh Journal of Botany 52: 141-194.; 2002Oliveira-Filho AT, Ratter JA. 2002. Vegetation physiognomies and woody flora of the Cerrado biome. In: Oliveira PS, Marquis RJ. (eds.) Ecology and natural history of a neotropical savanna. New York, Columbia University Press. p. 91-120.; IBGE 2004IBGE - Instituto Brasileiro de Geografia e Estatística. 2004. Mapa de Biomas do Brasil. Rio de Janeiro, IBGE. https://www.ibge.gov.br/geociencias-novoportal/informacoes-ambientais/estudos-ambientais/15842-biomas.html?=&t=downloads. 18 Feb. 2017.
https://www.ibge.gov.br/geociencias-novo...
; Marimon et al. 2006Marimon BS, Lima ES, Duarte TG, Chieregatto LC, Ratter JA. 2006. Observations on the vegetation of northeastern Mato Grosso, Brazil. IV. An analysis of the Cerrado-Amazonian forest ecotone. Edinburgh Journal of Botany 63: 323-341.; Torello-Raventos et al. 2013Torello-Raventos M, Feldpausch TR, Veenendaal E, et al. 2013. On the delineation of tropical vegetation types with an emphasis on forest/savanna transition. Plant Ecology & Diversity 6: 101-137.). Floristically, the Cerrado-Amazon transition presents high complexity, because there are species that are widespread throughout the Cerrado (such as Qualea grandiflora; Marimon et al. 2006Marimon BS, Lima ES, Duarte TG, Chieregatto LC, Ratter JA. 2006. Observations on the vegetation of northeastern Mato Grosso, Brazil. IV. An analysis of the Cerrado-Amazonian forest ecotone. Edinburgh Journal of Botany 63: 323-341.), typical Amazon species (such as Tetragastris altissima and Xylopia amazonica; Marimon et al. 2006Marimon BS, Lima ES, Duarte TG, Chieregatto LC, Ratter JA. 2006. Observations on the vegetation of northeastern Mato Grosso, Brazil. IV. An analysis of the Cerrado-Amazonian forest ecotone. Edinburgh Journal of Botany 63: 323-341.), and there are also contributions of Atlantic species (Méio et al. 2003Méio BB, Freitas CV, Jatobá L, Silva MEF, Ribeiro JF, Henriques RPB. 2003. Influência da flora das florestas Amazônica e Atlântica na vegetação do cerrado sensu stricto. Revista Brasileira de Botânica 26: 437-444.). This is a transition encompassing more than 1,500 tree and tree-like species (i.e., plants that are able to grow taller than 3 m in stature without climbing or leaning against other plants; Oliveira-Filho 2017Oliveira-Filho AT. 2017. NeoTropTree: tree flora of the neotropical region: a database involving biogeography, diversity and conservation. Belo Horizonte, Universidade Federal de Minas Gerais. http://www.neotroptree.info
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), being 89 of them considered as priority for conservation due to a combination of regional responsibility, habitat vulnerability and local rarity (Maciel et al. 2016Maciel EA, Oliveira-Filho AT, Eisenlohr PV. 2016. Prioritizing rare tree species of the Cerrado-Amazon ecotone: warnings and insights emerging from a comprehensive transitional zone of South America. Natureza & Conservação 14:74-82.). These characteristics, coupled with the lack of geographical barriers, such as large mountain ranges, indicate that patterns associated with habitat type appear to be involved in floristic similarity (e.g., Morandi et al. 2016Morandi PS, Marimon BS, Eisenlohr PV, et al. 2016. Patterns of tree species composition at watershed-scale in the Amazon ‘arc of deforestation’: implication for conservation. Environmental Conservation 43: 317-326.).

Variations of vegetation patterns are usually linked, but not exclusively, to deterministic environmental predictors (Kunz et al. 2009Kunz SH, Ivanauskas NM, Martins SV, Silva E, Stefanello D. 2009. Análise da similaridade florística entre florestas do Alto Rio Xingu da Bacia Amazônica e do Planalto Central. Revista Brasileira de Botânica 32: 725-736.; Lippok et al. 2013Lippok D, Beck SG, Renison D, et al. 2013. Forest recovery of areas deforested by fire increases with elevation in the tropical Andes. Forest Ecology and Management 295: 69-76.), such as climate (Costa & Pires 2010Costa MH, Pires GF. 2010. Effects of Amazon and Central Brazil deforestation scenarios on the duration of the dry season in the arc of deforestation. Journal of Climatology 30: 1970-1979.; Hirota et al. 2010Hirota M, Nobre C, Oyame MD, Bustamante MMC. 2010. The climate sensitivity of the forest, savanna and forest-savanna transition in tropical South America. New Phytologist 187: 707-719.; Vourlitis et al. 2014Vourlitis GL, Nogueira JS, Lobo FA, Pinto-Júnior OB. 2014. Variation in evapotranspiration and climate for Amazonian semi-deciduous forest over seasonal, annual, and El Ñino cycles. International Journal of Biometeorology 59: 217-230.), in special the different precipitation patterns (Hutyra et al. 2005Hutyra RL, Munger JW, Nobre CA, Saleska SR, Vieira SA, Wofsy SC. 2005. Climatic variability and vegetation vulnerability in Amazônia. Geophysical Research Letters 32: 1-4.; Staver et al. 2011Staver AC, Archibald S, Levin SA. 2011. The global extent and determinants of savanna and forest as alternative biome states. Science 334: 230-232.; Marimon et al. 2014Marimon BS, Marimon-Junior BH, Feldpausch TR, et al. 2014. Disequilibrium and hyperdynamic tree turnover at the forest-cerrado transition zone in southern Amazonia. Plant Ecology & Diversity 7: 281-292.). In more local scales, the influence of soil properties (Murphy & Bowman 2012Murphy BP, Bowman DMJS. 2012. What controls the distribution of tropical forest and savanna? Ecology Letters 15: 748-758.; Pontara et al. 2016Pontara V, Bueno ML, Garcia LE, et al. 2016. Fine-scale variation in topography and seasonality determine radial growth of an endangered tree in Brazilian Atlantic forest. Plant Soil 403: 1-14.) and the role of fire (Hoffmann et al. 2012Hoffmann WA, Geiger EL, Gotsch SG, et al. 2012. Ecological thresholds at the savanna-forest boundary: how plant traits, resources and fire govern the distribution of tropical biomes. Ecology Letters 15: 759-768.) should be considered as important drivers of floristic variations. Together, these predictors are considered as modulators of niche-based processes in metacommunities (e.g., Tilman 1982Tilman D. 1982. Resource competition and community structure. Princeton, University Press Princeton.; Chase & Leibold 2003Chase JM, Leibold MA. 2003. Ecological niches: linking classical and contemporary approaches. Chicago, University of Chicago Press.; Shipley et al. 2012Shipley B, Paine CET, Baraloto C. 2012. Quantifying the importance of local niche‐based and stochastic processes to tropical tree community assembly. Ecology 93: 760-769.). For the Amazon-Cerrado transition, evidences show a significant correlation between precipitation patterns and their forest cover (Debortoli et al. 2016Debortoli NS, Dubreiul V, Hirota M, Filho SR, Lindoso DP, Nanbucet J. 2016. Detecting deforestation impacts in Southern Amazonia rainfall using rain gauges. International Journal of Climatology 37: 2899-2900.) and the influence of different soil attributes on vegetation structure, including species diversity (Rodrigues et al. 2016Rodrigues PMS, Schaefer CEGR, Silva JO, Ferreira-Júnior WGF, Santos RM, Neri AV. 2016. The influence of soil on vegetation structure and plant diversity in diferente tropical savannic and forest habitats. Journal of Plant Ecology 11: 226-236.). In stable and alternative states of climate, soil and natural fire, this transition undergoes a progressive replacement of its savanna vegetation by forest formations (Maracahipes-Santos et al. 2018Maracahipes-Santos L, Santos JO, Reis SM, Lenza E. 2018. Temporal changes in species composition, diversity, and woody vegetation structure of savanna in the Cerrado-Amazon transition zone. Acta Botanica Brasilica 32: 254-263.), but the existence of various types of substrates and the greater presence of fire caused by anthropogenic processes tends to promote changes in the vegetation because their effects cause a decrease in density, basal area and, consequently, in biomass (Marimon et al. 2006Marimon BS, Lima ES, Duarte TG, Chieregatto LC, Ratter JA. 2006. Observations on the vegetation of northeastern Mato Grosso, Brazil. IV. An analysis of the Cerrado-Amazonian forest ecotone. Edinburgh Journal of Botany 63: 323-341.; Bueno et al. 2018Bueno ML, Dexter KG, Pennington RT, et al. 2018. The environmental triangle of the Cerrado Domain: Ecological factors driving shifts in tree species composition between forests and savannas. Journal of Ecology 106: 2109-2120.; Maracahipes-Santos et al. 2018Maracahipes-Santos L, Santos JO, Reis SM, Lenza E. 2018. Temporal changes in species composition, diversity, and woody vegetation structure of savanna in the Cerrado-Amazon transition zone. Acta Botanica Brasilica 32: 254-263.). Thus, these three components (climate, soil and fire) seem to be important drivers of vegetation changes in the Cerrado-Amazon transition.

Spatial processes may also be important drivers of vegetation patterns. Spatial predictive component is often associated (at least in part) to neutral factors, such as dispersion limitation (Gilbert & Lechowicz 2004Gilbert B, Lechowicz MJ. 2004. Neutrality, niches and dispersal in a temperate forest understory. Proceedings of the National Academy of Sciences of the United States of America 101: 7651-7656.; see, however, Diniz-Filho et al. 2012Diniz‐Filho JAF, Siqueira T, Padial AA, Rangel TF, Landeiro VL, Bini LM. 2012. Spatial autocorrelation analysis allows disentangling the balance between neutral and niche processes in metacommunities. Oikos 121: 201-210.; Neves et al. 2015Neves DM, Dexter KG, Pennington RT, Bueno ML, Oliveira-Filho AT. 2015. Environmental and historical controls of floristic composition across the South American Dry Diagonal Journal of Biogeography 42: 1566-1576.), and can act on various scales (Borcard et al. 2011Borcard D, Gillet F, Legendre P. 2011. Numerical ecology with R. New York, Springer.; Dray et al. 2012Dray S, Pelissier R, Couterin P, et al. 2012. Community ecology in the age of multivariate multiscale spatial analysis. Ecological Monographs 82: 257-275.), allowing species to be sorted along environmental gradients (Leibold et al. 2004Leibold MA, Holyoak M, Mouquet N, et al. 2004. The metacommunity concept: a framework for multi-scale community ecology. Ecology Letters 7: 601-613.). The similarity distance-decay of species occurrence, however, can be explained by two different components of variation: the “pure” spatial processes and the shared fraction between space and environment, sometimes referred to as “spatially structured environment” (Diniz-Filho et al. 2012Diniz‐Filho JAF, Siqueira T, Padial AA, Rangel TF, Landeiro VL, Bini LM. 2012. Spatial autocorrelation analysis allows disentangling the balance between neutral and niche processes in metacommunities. Oikos 121: 201-210. and references therein). Dissociating these two components is essential to ensure an accurate assessment of community patterns and their rules (Diniz-Filho et al. 2012Diniz‐Filho JAF, Siqueira T, Padial AA, Rangel TF, Landeiro VL, Bini LM. 2012. Spatial autocorrelation analysis allows disentangling the balance between neutral and niche processes in metacommunities. Oikos 121: 201-210.; Clappe et al. 2018Clappe S, Dray S, Peres-Neto PR. 2018. Beyond neutrality: disentangling the effects of species sorting and spurious correlations in community analysis. Ecology 99: 1737-1747.). In the Cerrado-Amazon transition, besides evidence on environmental processes acting on vegetation patterns as pointed out above, we have also evidence regarding the influence of spatial processes. For example, the floristic composition and structure of three vegetation types (forested savanna, dense savanna and typical savanna) of the Cerrado-Amazon transition would be determined by the space interacting with the environment (Maracahipes-Santos et al. 2017Maracahipes-Santos L, Lenza E, Santos JO, Mews HA. 2017. Effects of soil and space on the woody species composition and vegetation structure of three Cerrado phytophysiognomies in the Cerrado-Amazon transition. Brazilian Journal of Biology 77: 830-839.). Forests closer to water bodies were demonstrated to be more similar to each other than the more distant ones, with dominance by Amazon species due to the greater presence of soil moisture (Morandi et al. 2016Morandi PS, Marimon BS, Eisenlohr PV, et al. 2016. Patterns of tree species composition at watershed-scale in the Amazon ‘arc of deforestation’: implication for conservation. Environmental Conservation 43: 317-326.). In both cases, space seems to act more decisively on vegetation patterns when coupled with environmental variables.

Thus, there are clues pointing to the predictive capacity of the environmental and spatial components on the tree vegetation patterns of the Cerrado-Amazon transition, but little is known about the magnitude of the influences of different environmental determinants and different scales of spatial processes. Moreover, the Amazon-Cerrado transition coincides with the "Deforestation Arc", a region known for its high environmental degradation. Most of the natural forest vegetation has already been removed (Fearnside 2005Fearnside PM. 2005. Deforestation in Brazilian Amazonian: history, rates and consequences. Conservation Biology 19: 680-688.), which resulted from deforestation for agriculture (Ivanauskas et al. 2004Ivanauskas NM, Monteiro R, Rodrigues RR. 2004. Composição florística de trechos florestais na borda sul-amazônica. Acta Amazonica 34: 399-413.; Araujo et al. 2009Araújo RA, Costa RB, Felfili JM, Gonçalvez IK, Sousa RATM, Dorval A. 2009. Floristic and structure of a forest fragment at a transitional zone at the Amazon in Mato Grosso State, Municipality of Sinop. Acta Amazonica 39: 865-878.). Anthropogenic fires (Fearnside 2005Fearnside PM. 2005. Deforestation in Brazilian Amazonian: history, rates and consequences. Conservation Biology 19: 680-688.) and severe drought events (Lewis et al. 2011Lewis S, Brando PM, Phillips OL, Heiden GMFVD. 2011. The 2010 Amazon Drought. Science 331: 554.; Marengo et al. 2011Marengo JA, Tomasella J, Alves LM, Soares WR, Rodriguez DA. 2011. The drought of 2010 in the context of historical droughts in the Amazon region. Geophysical Research Letters 38: 1-5.) can cause losses of carbon storage, changes in regional precipitation patterns and river discharge, resulting in the death of species that are not resistant to this type of drastic change (Davidson et al. 2012Davidson EA, Araújo AC, Artaxo P, et al. 2012. The Amazon basin in transition. Nature 481: 321-328.). Such issues, in addition to the floristic relevance of the region, make it important to generate theoretical and empirical support that could be capable of facilitating conservation decisions in these environments (Gaston 2000Gaston KJ. 2000. Global patterns in biodiversity. Nature 405: 220-227.; Cestaro & Soares 2004Cestaro LA, Soares JJ. 2004. Variações florística e estrutural e relações fitogeográficas de um fragmento de floresta decídua no Rio Grande do Norte, Brasil. Acta Botanica Brasilica 18: 203-218.; Machado et al. 2004Machado ELM, Oliveira-Filho AT, Carvalho WAC, Souza JS, Borém RAT, Botezelli L. 2004. Análise comparativa da estrutura e flora do compartimento arbóreo-arbustivo de um remanescente florestal na fazenda Beira Lago, Lavras, MG. Revista Árvore 28: 499-516.). Recognizing species that characterize each vegetation landscape and investigating the drivers of floristic patterns for the whole extension of this transition are of utmost importance for conservation and will bring fundamental knowledge to better understand it, thereby favoring public policies and restoration programs that could act to reduce the impact of human pressure.

We took advantage of a comprehensive database (NeotropTree; Oliveira-Filho 2017Oliveira-Filho AT. 2017. NeoTropTree: tree flora of the neotropical region: a database involving biogeography, diversity and conservation. Belo Horizonte, Universidade Federal de Minas Gerais. http://www.neotroptree.info
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) to investigate floristic similarities, to assess indicator species of different habitats and to model the influence of environmental and spatial variables on patterns of floristic variations along this transition. Our hypotheses and predictions were two-fold: i) the floristic composition of most typical forest types of the Amazon Domain would be notably distinct to the floristic composition of savanna types, which are more typical of the Cerrado Domain, thereby confirming the influence of habitat type suggested by Morandi et al. (2016Morandi PS, Marimon BS, Eisenlohr PV, et al. 2016. Patterns of tree species composition at watershed-scale in the Amazon ‘arc of deforestation’: implication for conservation. Environmental Conservation 43: 317-326.). If this would be true, and if this would be the predominant pattern along this transition, we can predict that soil and fire variables are powerful drivers of phytogeographic patterns along this transition, because they are widely recognized as decisive actors in such scales (e.g., Hoffmann et al. 2012Hoffmann WA, Geiger EL, Gotsch SG, et al. 2012. Ecological thresholds at the savanna-forest boundary: how plant traits, resources and fire govern the distribution of tropical biomes. Ecology Letters 15: 759-768.; Murphy & Bowman 2012Murphy BP, Bowman DMJS. 2012. What controls the distribution of tropical forest and savanna? Ecology Letters 15: 748-758.); ii) since there are no large geographic barriers throughout the transition investigated, we expected to find no severe dispersion constraints over large distances. If this would be true, we can predict to find a reduced role of the “pure” spatial component acting on broader scales. In this case, since dispersal occurs over restricted spatial scales, similarity in community composition declines with increasing distance (Condit et al. 2002Condit R, Pitman N, Leigh-Junior EG, et al. 2002. Beta-diversity in tropical forest trees. Science 295: 666-669.; Soininen et al. 2007Soininen J, McDonald R, Hillebrand H. 2007. The distance decay of similarity in ecological communities. Ecography 30: 3-12. ; Page & Shanker 2018Page NV, Shanker K. 2018. Environment and dispersal influence changes in species at different scales in woody plants of the Western Ghats, India. Journal of Vegetation Science 29: 74-83.), and spatial variables representing finer scales (Borcard et al. 2011Borcard D, Gillet F, Legendre P. 2011. Numerical ecology with R. New York, Springer.; Dray et al. 2012Dray S, Pelissier R, Couterin P, et al. 2012. Community ecology in the age of multivariate multiscale spatial analysis. Ecological Monographs 82: 257-275.) would be significant predictors of floristic variations.

Materials and methods

Database

We used the database NeotropTree (NTT) (Oliveira-Filho 2017Oliveira-Filho AT. 2017. NeoTropTree: tree flora of the neotropical region: a database involving biogeography, diversity and conservation. Belo Horizonte, Universidade Federal de Minas Gerais. http://www.neotroptree.info
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) to obtain biotic and abiotic data. The NTT consists of checklists of tree species, which are defined as stem plants larger than 3 meters high, capable of sustaining themselves without relying on other plants (Eisenlohr & Oliveira-Filho 2015Eisenlohr PV, Oliveira-Filho AT. 2015. Obtenção e estruturação de metadados para trabalhos fitogeográficos de síntese e o banco de dados NeoTropTree como estudo de caso. In: Eisenlohr PV, Felfili JM, Melo MMRF, Andrade LA, Neto JAAM. (ed.) Fitossociologia no Brasil: métodos e estudos de casos. Vol. 2. Viçosa, Editora UFV. p. 385-411. ), and geo-climatic information for the entire Neotropical region. Each site of NTT consists of a circular area with a radius of 5 km determining a single type of vegetation, characterized according to the system proposed by Oliveira-Filho (2015)Oliveira-Filho AT. 2015. Um sistema de classificação fisionômico-ecológico da vegetação neotropical: segunda aproximação. In: Eisenlohr PV, Felfili JM, Melo MMRF, Andrade LA, Neto JAAM. (eds.) Fitossociologia no Brasil: métodos e estudos de casos . Vol. 2. Belo Horizonte, Editora UFV. p. 385-411.. All vegetation types were listed according to this system, and we defined nine major groups of vegetation types (Tab. 1).

Table 1
Groups of vegetation types used in this study, followed by their respective vegetation types.

We examined the 92 NTT sites for the Cerrado-Amazon transition zone (hereafter also referred to as Transition), delimited according toAb'Saber (2003Ab’Saber AN. 2003. Potencialidades Paisagísticas Brasileiras. São Paulo, Ateliê Editorial.) (Fig. 1). Our choice for the classification ofAb'Saber (2003Ab’Saber AN. 2003. Potencialidades Paisagísticas Brasileiras. São Paulo, Ateliê Editorial.) relies on the fact that this is a holistic way of seeing and analyzing biogeographic regions; such mapping considers vegetation types as well as environmental characteristics, including relief, soil and climatic-hydrological conditions. We worked with 17,240 occurrence records distributed in 11 families, 569 genera and 2,530 species occurring throughout the Transition.

Figure 1
Transition area between the Amazon and Cerrado Domains with the 92 sites of the 'NeotropTree' database used in this study. Each point is highlighted with different symbols and colors according to its vegetation type.

The environmental data consisted of 30 variables obtained for the center of each NTT site (see details in Oliveira-Filho 2017Oliveira-Filho AT. 2017. NeoTropTree: tree flora of the neotropical region: a database involving biogeography, diversity and conservation. Belo Horizonte, Universidade Federal de Minas Gerais. http://www.neotroptree.info
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). The 11 bioclimatic descriptors related to temperature and precipitation patterns were obtained from WorldClim, a set of global high resolution layers created by Hijmans et al. (2005Hijmans RJ, Cameron SE, Parra JL, Jones PG, Jarvis A. 2005. Very high resolution interpolated climate surface for global land areas. International Journal of Climatology 25: 1965-1978.). The aridity index was generated according to Zomer et al. (2006Zomer RJ, Trabucco A, van Straaten O, Bossio DA. 2006. Carbon, Land and Water: hydrologic dimensions of climate change mitigation through afforestation and reforestation. Colombo, International Water Management Institute). The mean duration and severity of the periods of deficit and excess water were extracted according to the Walter Diagram (Walter 1985Walter H. 1985. Vegetation of the earth and ecological systems of the geo-biosphere. Berlin, Springer-Verlag.). Soil variables were obtained using satellite imagery from Google Earth and the Harmonized World Soil Database v. 1.2 (Fischer et al. 2008Fischer G, Nachtergaele F, Prieler S, Velthuizen HT, Verelst L, Wiberg D. 2008. Global agro-ecological zones assessment for agriculture (GAEZ 2008). Laxenburg, IIASA.). The spatial data consisted of geographical coordinates (latitude and longitude) obtained from the center of each NTT site.

Data analysis

We performed all analyzes in the R statistical environment, version 3.4.1 (R Development Core Team 2017R Development Core Team. 2017. R: A language and environment for statistical computing. Vienna, R Foundation for Statistical Computing. http://www.R-project.org/
http://www.R-project.org/...
). We used the following matrices: floristic data (with occurrence records of families, genera and species from each NTT site), environmental data (with 30 environmental variables from each site) and geographic coordinate’s data (latitude and longitude) from each site. In all statistical tests, we used a significance level of 5 %.

Identity and floristic connections

Using the floristic matrices, we examined the unique and shared number of families, genera and species for the Transition in relation to Amazon and Cerrado using Venn Diagrams. We performed an Indicator Species Analysis for the Transition in relation to both domains, and also for the vegetation types of the Transition (Tab. 1). The specificity (A) and sensitivity (B) metrics are considered to the calculation of the indicator value - (A) is the mean of species occurrence of the target group (Transition, in a first moment, and each vegetation type of the Transition, in a second moment), divided by the sum of the mean abundance values in all groups, and (B) is the relative frequency of occurrence (presence-absence) of species within the target group (Cáceres & Legendre 2009Cáceres M, Legendre P. 2009. Association between species and groups of sites: indices and statistical inference. Ecology 90: 3566-3574.). These two measures are combined to produce ‘Stat’ values (Stat = A + B / 2), which is an indicator metric for each species. The ‘Stat’ significance for each species was obtained by randomization test (999 permutations) (Borcard et al. 2011Borcard D, Gillet F, Legendre P. 2011. Numerical ecology with R. New York, Springer.).

We here used the ‘venn.diagram’ function of the 'VennDiagram' package (Hanbo 2018Hanbo C. 2018. VennDiagram: generate high-resolution venn and euler plots. https://CRAN.R-project.org/package=VennDiagram. 14 Aug. 2018
https://CRAN.R-project.org/package=VennD...
) and the 'multipatt' function of the 'indicspecies' package (Cáceres & Legendre 2009Cáceres M, Legendre P. 2009. Association between species and groups of sites: indices and statistical inference. Ecology 90: 3566-3574.).

Floristic groups and gradients

We examined possible floristic groups (species-level) involving the Transition sites by means of cluster analysis, using the UPGMA (Unweighted Pair Group Method with Arithmetic Mean) algorithm. We used Simpson distance because this coefficient is less affected by variation in species richness between sites (Baselga et al. 2007Baselga A, Jiménez-Valverde A, Niccolini G. 2007. A multiple-site similarity measure independent of richness. Biology Letters 3: 642-645.). We performed this analysis using the floristic matrix of species without uniques (22 %). Uniques generally cause noise and do not contribute to the most important floristic patterns (Lepš & Smilauer 2003Lepš J, Smilauer P. 2003. Multivariate Analysis of Ecological Data using CANOCO. New York, Cambridge University Press.).

We calculated the possible number of groups through a cut-off threshold in the dendrogram that accounted for 90 % of floristic dissimilarity (Dapporto et al. 2013Dapporto L, Ramazzotti M, Falttorini S, Talavera G, Vila R, Dennis RLH. 2013. recluster: an unbiased clustering procedure for beta-diversity turnover. Ecography 36: 1070-1075.; Holt et al. 2013Holt BG, Lessard JP, Borregaard MK, et al. 2013. An update of Wallace's zoogeographic regions of the world. Science 339: 74-78.). We retained a total of 16 statistically consistent groups, which were reduced to 11 after the discard of groups without phytogeographic cohesion (groups composed of only one site). Each of these 11 groups had their sites grouped to build a single list per group (see DRYFLOR 2016DRYFLOR. 2016. Plant diversity patterns in neotropical dry forests and their conservation implications. Science 353: 1383-1387. ). Based on these 11 groups, we obtained an AU (Approximately Unbiased) value, highlighting in the dendrogram the groups that are strongly supported by the data, i.e., that present AU greater than 95 % (Suzuki & Shimodaira 2006Suzuki R, Shimodaira H. 2006. Pvclust: an R package for assessing the uncertainty in hierarchical clustering. Bioinformatics Application Note 22: 1540-1542.).

We examined the unconstrained floristic gradients throughout the Transition by means of NMDS (Non-Metric Multidimensional Scaling) ordination performed on the floristic matrix of species, using the Simpson index (200 iterations). We calculated the stress as a measure of fit and interpreted it according to Clarke (1993Clarke KR. 1993. Non-parametric multivariate analyses of changes in community structure. Austral Ecology 18: 117-143. ). Lower stress indicates a better adjustment between original dissimilarity and the result displayed by ordination diagrams.

Performing both cluster and ordination analyses is important to obtain complementary results on vegetation patterns (Kent 2011Kent M. 2011. Vegetation description and data analysis: a practical approach. New Jersey, John Wiley & Sons.). For cluster analyses, we used different functions available at the 'recluster' (Dapporto et al. 2013Dapporto L, Ramazzotti M, Falttorini S, Talavera G, Vila R, Dennis RLH. 2013. recluster: an unbiased clustering procedure for beta-diversity turnover. Ecography 36: 1070-1075.) and 'pvclust' (Suzuki & Shimodaira 2006Suzuki R, Shimodaira H. 2006. Pvclust: an R package for assessing the uncertainty in hierarchical clustering. Bioinformatics Application Note 22: 1540-1542.) packages. Specifically for NMDS, we used the 'metaMDS' function of the 'vegan' package (Oksanen et al. 2018Oksanen J, Blanchet FG, Friendly M, et al. 2018. vegan: community ecology package. https://CRAN.R-project.org/package=vegan. 14 Aug. 2018.
https://CRAN.R-project.org/package=vegan...
).

Environmental and spatial predictive power on floristic patterns

We modeled the floristic variations in relation to environmental and spatial variables by means of the Redundancy Analysis based on transformation (tb-RDA) (Borcard et al. 2011Borcard D, Gillet F, Legendre P. 2011. Numerical ecology with R. New York, Springer.). Tb-RDA has been demonstrated to be a powerful method to model ecological community data (Legendre & Gallagher 2001Legendre P, Gallagher ED. 2001. Ecologically meaningful transformations for ordination of species data. Oecologia 129: 271-280.; Borcard et al. 2011Borcard D, Gillet F, Legendre P. 2011. Numerical ecology with R. New York, Springer.).

First, the species matrix, without uniques, was submitted to Hellinger's transformation, which is well suited for ecological community data (Legendre & Gallagher 2001Legendre P, Gallagher ED. 2001. Ecologically meaningful transformations for ordination of species data. Oecologia 129: 271-280.). The environmental matrix was subjected to a hierarchical clustering of variables (Chavent et al. 2012Chavent M, Kuentz-Simonet V, Liquet B, Saraco J. 2012. ClustOfVar: an R package for the clustering of variables. Journal of Statistical Software 50: 1-16.) in order to reduce dimensionality, which is useful to remove collinearities. We retained eight clusters (Tab. 2) with bootstrap curve assistance (‘stability’ function of ‘ClustOfVar’ package). Each cluster was submitted to a Mixed PCA (Principal Components Analysis for a mixture of quantitative and qualitative variables; Chavent et al. 2012Chavent M, Kuentz-Simonet V, Liquet B, Saraco J. 2012. ClustOfVar: an R package for the clustering of variables. Journal of Statistical Software 50: 1-16. and references therein), being retained its first component as a proxy of the correspondent subset of variables (Chavent et al. 2012Chavent M, Kuentz-Simonet V, Liquet B, Saraco J. 2012. ClustOfVar: an R package for the clustering of variables. Journal of Statistical Software 50: 1-16.). We therefore obtained an environmental matrix with eight PCA components, each one being considered a synthetic variable of each cluster (Tab. 2).

Table 2
Environmental variables retained in each cluster according to the method of hierarchical clustering of variables.

We obtained spatial variables from Moran’s Eigenvector Maps (MEMs; Dray et al. 2006Dray S, Legendre P, Peres-Neto PR. 2006. Spatial modelling: a comprehensive framework for principal coordinate analysis of neighbor matrices (PCNM). Ecological Modelling 196: 483-493.), which are orthogonal variables derived from latitude and longitude obtained from a spatial weighting matrix (SWM) whose corresponding eigenvalues are linearly related to Moran’s index of spatial autocorrelation (Dray et al. 2006Dray S, Legendre P, Peres-Neto PR. 2006. Spatial modelling: a comprehensive framework for principal coordinate analysis of neighbor matrices (PCNM). Ecological Modelling 196: 483-493.; Bauman et al. 2018Bauman D, Drouet T, Marie-Josée F, Dray S. 2018. Optimizing the choice of a spatial weighting matrix in eigenvector-based methods. Ecology 99: 2519-2166.). MEMs are usually referred to as “spatial filters” (e.g., Diniz-Filho & Bini 2005Diniz-Filho JAF, Bini LM. 2005. Modelling geographical patterns in species richness using eigenvector-based spatial filters. Global Ecology and Biogeography 14: 177-185. and references therein). Since there are several SWMs available by selecting a set of predefined connectivity and weighting matrices (a total of 21 SWMs, if one applies the ‘listw.candidates’ function of ‘adespatial’ package of R; Dray et al. 2018Dray S, Bauman D, Blanchet G, et al. 2018. adespatial: multivariate multiscale spatial analysis. https://cran.r-project.org/web/packages/adespatial/adespatial.pdf. 10 Nov. 2018.
https://cran.r-project.org/web/packages/...
), each one generating different spatial filters (Dray et al. 2006Dray S, Legendre P, Peres-Neto PR. 2006. Spatial modelling: a comprehensive framework for principal coordinate analysis of neighbor matrices (PCNM). Ecological Modelling 196: 483-493.; Bauman et al. 2018Bauman D, Drouet T, Marie-Josée F, Dray S. 2018. Optimizing the choice of a spatial weighting matrix in eigenvector-based methods. Ecology 99: 2519-2166.), we selected the SWM that generated the most adjusted selected model (higher adjusted R² to explain the floristic variations; Bauman et al. 2018Bauman D, Drouet T, Marie-Josée F, Dray S. 2018. Optimizing the choice of a spatial weighting matrix in eigenvector-based methods. Ecology 99: 2519-2166.).

We selected the environmental and spatial variables that influenced the floristic variations at the species level by means of forward selections, after making sure that each global model was significant (ANOVA p<0.05; Blanchet et al. 2008Blanchet FG, Legendre P, Borcard D. 2008. Forward selection of explanatory variables. Ecology 89: 2623-2632.). Both forward-selection procedures followed the double-stop criterion of Blanchet et al. (2008)Blanchet FG, Legendre P, Borcard D. 2008. Forward selection of explanatory variables. Ecology 89: 2623-2632.. With the selected variables, we partitioned the tb-RDA variance among the components that explain the floristic patterns: [a] environmental variables; [b] environmental variables and spatial filters indistinguishably; [c] spatial filters; [d] undetermined fraction (residuals). We applied the corrections proposed by Clappe et al. (2018)Clappe S, Dray S, Peres-Neto PR. 2018. Beyond neutrality: disentangling the effects of species sorting and spurious correlations in community analysis. Ecology 99: 1737-1747. by performing a Moran Spectral Randomization for variation partitioning. This procedure ensures corrected estimates of each fraction by adjusting the test for spurious contributions due to spatial autocorrelation from the environmental fraction (Clappe et al. 2018Clappe S, Dray S, Peres-Neto PR. 2018. Beyond neutrality: disentangling the effects of species sorting and spurious correlations in community analysis. Ecology 99: 1737-1747.).

We used the following packages in the above-mentioned analyses: 'ClustOfVar' (Chavent et al. 2012Chavent M, Kuentz-Simonet V, Liquet B, Saraco J. 2012. ClustOfVar: an R package for the clustering of variables. Journal of Statistical Software 50: 1-16.), to perform hierarchical clustering of variables and, thus, to obtain PCA axes that summarize each subset of environmental variables; 'spdep' (Bivand et al. 2019Bivand R, Altman M, Anselin L, et al. 2019. spdep: Spatial Dependence: weighting schemes, statistics and models. https://cran.r-project.org/web/packages/spdep/index.html. 19 Feb. 2019.
https://cran.r-project.org/web/packages/...
), ‘ade4’ (Dray & Dufour 2007Dray S, Dufour AB. 2007. The ade4 Package: implementing the duality diagram for ecologists. Journal of Statistical Software 4: 1-20.) and 'adespatial' (Dray et al. 2018Dray S, Bauman D, Blanchet G, et al. 2018. adespatial: multivariate multiscale spatial analysis. https://cran.r-project.org/web/packages/adespatial/adespatial.pdf. 10 Nov. 2018.
https://cran.r-project.org/web/packages/...
), to generate and select SWMs, and to perform forward selections; 'vegan' (Oksanen et al. 2018Oksanen J, Blanchet FG, Friendly M, et al. 2018. vegan: community ecology package. https://CRAN.R-project.org/package=vegan. 14 Aug. 2018.
https://CRAN.R-project.org/package=vegan...
) and ‘ade4’, to perform tb-RDA models and variance partitioning; 'adespatial', to calculate Moran Spectral Randomization for variation partitioning; and 'ggplot2' (Wickham et al. 2018Wickham H, Chang W, Henry L, et al. 2018. create elegant data visualisations using the grammar of graphics. https://cran.r-project.org/web/packages/ggplot2/ggplot2.pdf. 18 Nov. 2018.
https://cran.r-project.org/web/packages/...
), to generate and edit the tb-RDA graphs.

Results

Identity and floristic connections

The Transition shared 110 families, 545 genera and 2,322 species with the Amazon and 106 families, 567 genera and 1,533 species with the Cerrado (Fig. 2). The main indicator species for the Transition in relation to the Amazon and the Cerrado was Senna silvestris (Stat = 0.541, p<0.01). We show the main indicator species for each vegetation type (Tab. 3). Riparian forests did not present indicator species.

Table 3
Main indicator species for each vegetation type group, followed by their respective statistics (see Materials and methods).

Figure 2
Venn diagram showing the number of families (A), genera (B) and species (C) exclusive and shared for the Amazon, Cerrado and the transition area between these two phytogeographic domains.

Floristic groups and gradients

The cluster analysis revealed four floristic groups (Fig. 3). The first group (highlighted in blue, Fig. 3) was formed by flooded forests; the second group, solely by white sand dwarf-forests; the third group, by savannas and dwarf-forests (highlighted in green, Fig. 3); the fourth group (highlighted in purple, Fig. 3), by the majority of forest types as well as by the coastal fluvial-sandstone mosaic.

Figure 3
Dendrogram obtained by the 'pvclust' method, highlighting the groups (rectangles with different colors) with high values of support (numbers in red), i.e., those which presented values of AU (Approximately Unbiased) higher than 95 %.

The NMDS produced a two-dimensional solution with a stress of 0.162, indicating a good representation of general patterns (Clarke 1993Clarke KR. 1993. Non-parametric multivariate analyses of changes in community structure. Austral Ecology 18: 117-143. ). The first axis of the diagram (Fig. 4) indicated a gradient opposing, as a general rule, savannic physiognomies (shrub/woodland savannas and rocky savannas), to the left, to forest physiognomies (seasonal, rain and riparian forests), to the right, passing through dwarf-forests. The second axis indicated a gradient that started from the rain forests and contrasted with the fluvial-sandstone areas and other forest types. We also detected a greater discrimination for the flooded areas in relation to all other vegetation types of the Transition.

Figure 4
Non-metric multidimensional scaling (NMDS - Simpson index) of Cerrado-Amazon transition sites in a two-dimensional space (stress = 0.162). Points represent each group of vegetation type (see Tab. 1).

Environmental and spatial predictive power on floristic patterns

The model retained seven of the eight PCA clusters that summarized the environmental variables (Table S1 in supplementary material). Eleven spatial filters from SWM coded by ‘Dnear 1.79_Down_5’, a distance-based connectivity matrix obtained by concave-down weighting function (see Bauman et al. 2018Bauman D, Drouet T, Marie-Josée F, Dray S. 2018. Optimizing the choice of a spatial weighting matrix in eigenvector-based methods. Ecology 99: 2519-2166.; Dray et al. 2018Dray S, Bauman D, Blanchet G, et al. 2018. adespatial: multivariate multiscale spatial analysis. https://cran.r-project.org/web/packages/adespatial/adespatial.pdf. 10 Nov. 2018.
https://cran.r-project.org/web/packages/...
), were selected to account for spatial structures.

The variance partition and the tests performed on partial tb-RDAs showed a significant contribution of both environmental (p = 0.001) and spatial variables (p = 0.001). The floristic variance (adjusted R²) due to [a] only environmental variables totaled 6.49 %, [b] the shared fraction between environmental and spatial variables totaled 2.07 %, [c] only spatial variables totaled 8.57 % and [d] the undetermined fraction (residuals) totaled 82.87 %.

The final tb-RDA diagram (Fig. 5) captured, for the first axis, an explanation of 29.02 % of the canonical variation in the species distribution (F = 14.95; p = 0.001) and, for the second axis, 16.74 % of this variation (F = 8.62, p = 0.001) - 12 % and 6.9 % of the total variation, respectively. For both axes, 'Cluster 6' (fire-related variables, Tab. 2) and 'Cluster 5' (variables related to soil moisture, Tab. 2) were the most important environmental predictors (Fig. 5). However, in the axis 2, one of the spatial filters ('MEM 9') presented greater contribution than ‘Cluster 6’ (Fig. 5).

Figure 5
Diagram yielded by tb-RDA for the complete selected model, i.e., with environmental and spatial filters (MEMs). Each 'Cluster' represents a group of environmental variables (see Table 2).

Discussion

Despite the consistent identity of each group, our results strongly reinforce the floristic connections of the Cerrado-Amazon transition with its adjacent domains. This makes this a region with its own floristic characteristics, but also a floristic subset of the Amazon and Cerrado domains. Such floristic features, when influenced significantly by environmental and spatial variables, as is the case with the Transition’s flora, may point to consistent responses to environmental changes and neutral dynamics, including limitation to dispersal processes, making this region an area of great relevance for biological conservation (Soininen et al. 2007Soininen J, McDonald R, Hillebrand H. 2007. The distance decay of similarity in ecological communities. Ecography 30: 3-12. ; Castillo-Campos et al. 2008Castillo-Campos G, Halfter G, Moreno CE. 2008. Primary and secondary vegetation patches as contributors to floristic diversity in a tropical deciduous forest landscape. Biodiversity and Conservation 17: 1701-1714.).

The strongest indicator species of the Transition, Senna silvestris, is widely distributed and shown to be adapted to different habitats. As the Transition has several habitats that offer conditions for the occurrence of this species, this result was attributed to a preferential occurrence in the region in relation to the Amazon and Cerrado domains. This means that although S. silvestris also occurs in the Amazon and the Cerrado, its distribution in these regions is not as frequent as along the Transition, in which the species can be found in 52 of the 92 sites present in NeotropTree database.

Regarding the indicator species of each vegetation type of the Transition, these may have physiological and ecological characteristics that make them have a preference for a certain habitat. These characteristics help in the differentiation of the vegetation types presented here. For example, Astrocaryum jauari, the main indicator species of flooded forests, has different characteristics that allow it to survive in flooded areas (Schluter et al. 1993Schluter UB, Furch B, Joly CA. 1993. Physiological and anatomical adaptations by young Astrocaryum jauari Mart. (Arecaceae) in periodically inundated biotopes of Central Amazonia. Biotropica 25: 384-396.). Furthermore, because they have associations that are consistent with a single habitat type, the indicator species of each vegetation type can be used as diagnostic species, which are useful in the identification of a particular habitat. In this sense, examining their physiological characteristics can inform responses related to impacts or disturbances in different habitats (Cáceres & Legendre 2009Cáceres M, Legendre P. 2009. Association between species and groups of sites: indices and statistical inference. Ecology 90: 3566-3574.; Kanagaraj et al. 2011Kanagaraj R, Wiegand T, Comita LS, Huth A. 2011. Tropical tree species assemblages in topographical habitats change in time and with life stage. Journal of Ecology 99: 1441-1452.).

The differences in floristic composition between savanna and forest are widely reported (Borchet 1988Borchet R. 1988. Responses of tropical trees to rainfall seasonality and its long-term changes. In: Markham A. (ed.) Potential impacts of climate change on tropical forest ecosystems. New York, Springer . p. 241-253.; Rocha et al. 2009Rocha HR, Manzi AO, Cabral OM, et al. 2009. Patterns of water and head flux across a biome gradient from tropical forest to savanna in Brazil. Journal of Geophysical Research 114: 1-8.; Staver et al. 2011Staver AC, Archibald S, Levin SA. 2011. The global extent and determinants of savanna and forest as alternative biome states. Science 334: 230-232.; Davidson et al. 2012Davidson EA, Araújo AC, Artaxo P, et al. 2012. The Amazon basin in transition. Nature 481: 321-328.; Hoffmann et al. 2012Hoffmann WA, Geiger EL, Gotsch SG, et al. 2012. Ecological thresholds at the savanna-forest boundary: how plant traits, resources and fire govern the distribution of tropical biomes. Ecology Letters 15: 759-768.; Dantas et al. 2013Dantas VL, Batalha MA, Pausas JG. 2013. Fire drivers functional thresholds on the savanna-forest transition. Ecology 94: 2454-2463.; Oliveira et al. 2014Oliveira RS, Chistoffersen BO, Barros FV, et al. 2014. Changing precipitation regimes and the water and carbon economies of trees. Theoretical and Experimental Plant Physiology 26: 65-82.; Bueno et al. 2018Bueno ML, Dexter KG, Pennington RT, et al. 2018. The environmental triangle of the Cerrado Domain: Ecological factors driving shifts in tree species composition between forests and savannas. Journal of Ecology 106: 2109-2120.; Dexter et al. 2018Dexter KG, Pennington RT, Oliveira-Filho AT, Bueno ML, Miranda PLS, Neves DN. 2018. Inserting tropical dry forests into the discussion on biome transitions in the tropics. Frontiers in Ecology and Evolution 6: 1-7.). We here confirmed this distinction, which is in accordance with our first hypothesis. This was evidenced by the grouping of the most typical forest physiognomies of the Amazon Domain (such as seasonal and rain forests) as opposed to the savannic physiognomies, which are more typical of the Cerrado Domain. However, rather than confirming patterns already reported in the literature, our work was the first to present such an approach to the transition between the major phytogeographic domains of South America, and the first to elucidate some of the processes responsible for these patterns.

Our analyzes also showed that the floodplains differ from the others in both cluster analysis and ordination. The influence of soil and river basin moisture is evident, showing that the floristic variation of the Transition is strongly related to local variations, and closer areas tend to be more similar to each other than to areas geographically close to river basins (Lenza et al. 2015Lenza E, Santos JO, Maracahipes-Santos L. 2015. Species composition, diversity, and vegetation structure in a gallery forest-cerrado sensu stricto transition zone in eastern Mato Grosso, Brasil. Acta Botanica Brasilica 29: 327-338.; Morandi et al. 2016Morandi PS, Marimon BS, Eisenlohr PV, et al. 2016. Patterns of tree species composition at watershed-scale in the Amazon ‘arc of deforestation’: implication for conservation. Environmental Conservation 43: 317-326.). Another remarkable pattern was the fact that the forested savannas (both dystrophic and mesotrophic ones) presented a greater floristic similarity with the typical savannas. This result may be not only associated with similar soil characteristics (Marimon-Júnior & Haridasan 2005Marimon-Júnior BH, Haridasan M. 2005. Comparação da vegetação arbórea e características edáficas de um cerradão e um cerrado sensu stricto em áreas adjacentes sobre solo distrófico no leste de Mato Grosso, Brasil. Acta Botanica Brasilica 19: 913-926.; Maracahipes-Santos et al. 2017Maracahipes-Santos L, Lenza E, Santos JO, Mews HA. 2017. Effects of soil and space on the woody species composition and vegetation structure of three Cerrado phytophysiognomies in the Cerrado-Amazon transition. Brazilian Journal of Biology 77: 830-839.), but also with the geographic proximity of these areas, since some forest species have physiological and ecological characteristics that allow them to settle in areas of savannas (Hoffmann et al. 2004Hoffmann WA, Orthen B, Franco AC. 2004. Constraints to seedling success of savanna and forest trees across the savanna-forest boundary. Oecologia 140: 252-260.; Pinheiro & Monteiro 2006Pinheiro MHO, Monteiro R. 2006. Contribution of forest species to the floristic composition of a forested savanna in southeastern Brazil. Brazilian Archives of Biology and Technology 49: 763-774.; 2008Pinheiro MHO, Monteiro R. 2008. Florística de uma Floresta Estacional Semidecidual, localizada em ecótono savânico-florestal, no município de Bauru, SP, Brasil. Acta Botanica Brasilica 22: 1085-1094. ).

Also in agreement with our first hypothesis, we indicated that fire and soil unequivocally determined variations in floristic composition throughout the Transition, indicating a role of environmental drivers acting on local scales (Murphy & Bowman 2012Murphy BP, Bowman DMJS. 2012. What controls the distribution of tropical forest and savanna? Ecology Letters 15: 748-758.; Dantas et al. 2013Dantas VL, Batalha MA, Pausas JG. 2013. Fire drivers functional thresholds on the savanna-forest transition. Ecology 94: 2454-2463.). However, from a spatial point of view, the filters selected for the canonical model act on broader scales - note that the first eigenvectors (MEM 1, MEM 2 etc.) have this characteristic, while the latest eigenvectors act on finer scales (Borcard et al. 2011Borcard D, Gillet F, Legendre P. 2011. Numerical ecology with R. New York, Springer.). This suggests a possible dispersion limitation at great distances, a fact that contradicts our second hypothesis. However, further discussions on possible neutral processes should be developed with caution, because we did not work with abundance data. If such data were available, the protocol suggested by Diniz-Filho et al. (2012Diniz‐Filho JAF, Siqueira T, Padial AA, Rangel TF, Landeiro VL, Bini LM. 2012. Spatial autocorrelation analysis allows disentangling the balance between neutral and niche processes in metacommunities. Oikos 121: 201-210.) could be applied to test a possible association between spatial contribution and neutral dynamics. An additional caution we recommend here is to ensure that spatial processes are being correctly estimated, which is a critical issue on variance partition framework (Clappe et al. 2018Clappe S, Dray S, Peres-Neto PR. 2018. Beyond neutrality: disentangling the effects of species sorting and spurious correlations in community analysis. Ecology 99: 1737-1747.). In fact, we took into account such caution by performing the method of Moran Spectral Randomization (Clappe et al. 2018Clappe S, Dray S, Peres-Neto PR. 2018. Beyond neutrality: disentangling the effects of species sorting and spurious correlations in community analysis. Ecology 99: 1737-1747.).

Our results also suggest that fire is probably a relevant factor, since ‘Cluster 6’ formed by the variables 'flammability index' and 'grass cover' was one of the most influential in the main axes of the canonical model, besides being the variable that most contributed to explain the model as a whole. This result may be associated with the land use, which can increase forest flammability, and grasses are the first to settle after deforestation (Brando et al. 2014Brando PM, Balch JK, Nepstad DC, et al. 2014. Abrupt increases in Amazonian tree mortality due drought-fire interaction. Proceedings of the National Academy of Sciences of the United States of America 111: 6347-6352.). Thus, our results show that these factors, associated with drought events and intense fires, may favor the substitution of forest types along the Transition in grass-dominated ecosystems, as demonstrated by Silvério et al. (2013Silvério DV, Brando PM, Balch JK, et al. 2013. Testing the Amazon savannization hypothesis: fire effects on invasion of neotropical forest by native cerrado and exotic pasture grasses. Philosophical Transactions of the Royal Society B 368: 1-8.) for the Amazon Forest.

The canonical model (tb-RDA) also showed a notable influence of ‘Cluster 5’ both on the first and second axes of the tb-RDA diagram (Fig. 5), and also for the model as a whole. This is a synthetic variable formed by environmental predictors related to soil moisture. These results, together with cluster and ordination analyses, reinforce that, among the predictors used in this study, soil moisture is one of the most important factors influencing the variation of the floristic variations along the Cerrado-Amazon transition.

Most of the variance (>80 %) was not explained. This may be due to the absence of some important predictor variables in the model, which may contribute to the variation of the floristic composition, or to random events that are not related to space and that would be able to increase the competition among plant species, thereby decreasing their recruitment limits (Hurt & Pacala 1995Hurt GC, Pacala SW. 1995. The consequences of recruitment limitation: reconciling chance, history and competitive differences between plants. Journal of Theoretical Biology 176: 1-12.; Favretto 2017Favretto MA. 2017. Teoria neutra de biodiversidade: controvérsias e uma transvaloração da conservação de espécies. Neotropical Biology and Conservation 12: 224-231. ). In addition to the environmental predictors used here (climate, fire and soil), ecophysiological characteristics, such as the incorporation of nutrient limitation, may also influence vegetation distribution patterns along the Cerrado-Amazon transition (Dionizio et al. 2018Dionizio EA, Costa MH, Castanho ADA, et al. 2018. Influence of climate variability, fire and phosphorus limitation on vegetation structure and dynamics of the Amazon-Cerrado border. Biogeosciences 15: 919-936.).

Our study reinforces the knowledge about the patterns responsible for shaping vegetation patterns on large tropical ecosystem transitions, which may differ when compared to extratropical communities in South America, an important fact to be considered in conservation strategies (Rezende et al. 2018Rezende VL, Bueno ML, Eisenlohr PV, Oliveira-Filho AT. 2018. Patterns of tree species variation across South America are shaped by environmental factors and historical processes. Perspectives in Plant Ecology, Evolution and Systematics 34: 10-16.). In addition, our results show the importance of deterministic processes, especially those related to the finer scales (soils and fire), and dispersal constraints (since spatial processes seem to be highly relevant), as possible modulators of these patterns, which could suggest a general macroecological rule for tropical transition zones (Bueno et al. 2017Bueno ML, Rezende VL, Pontara V, Oliveira-Filho AT. 2017. Floristic distributional patterns in a diverse ecotonal area in South America. Plant Ecology 218: 1171-1186.). We indicate the predictive capacity of the climate, which is not a surprise, because recent literature has shown, for instance, that precipitation is a major factor driving species distribution in the Cerrado and Amazon domains (e.g., Oliveira-Filho & Ratter 2002Oliveira-Filho AT, Ratter JA. 2002. Vegetation physiognomies and woody flora of the Cerrado biome. In: Oliveira PS, Marquis RJ. (eds.) Ecology and natural history of a neotropical savanna. New York, Columbia University Press. p. 91-120.; Esquivel-Muelbert et al. 2016Esquivel-Muelbert A, Baker TR, Dexter KG, et al. 2016. Seasonal drought limits tree species across the Neotropics. Ecography 40: 618-629.; but see Bueno et al. 2018Bueno ML, Dexter KG, Pennington RT, et al. 2018. The environmental triangle of the Cerrado Domain: Ecological factors driving shifts in tree species composition between forests and savannas. Journal of Ecology 106: 2109-2120.). However, edaphic and fire-related variables were more useful in predicting floristic variation in our study. In fact, the detection of limiting factors for species distribution is a hot issue for current research on possible biological responses to climate change, particularly in biogeographical transition zones (Sommer et al. 2018Sommer B, Beger M, Harrison PL, Babcock RC, Pandolfi JM. 2018. Differential response to abiotic stress controls species distributions at biogeographic transition zones. Ecography 41: 478-490.).

Transition areas often do not receive attention for biodiversity conservation strategies, although these areas may generate adaptive responses to environmental changes (Smith et al. 2001Smith TB, Kark S, Schneider CJ, Wayne RK, Moritz C. 2001. Biodiversity hostspots and beyond: the need for preserving environmental transitions. Trends in Ecology and Evolution 16: 431.). Taking into account this fact, and also that the Cerrado-Amazon transition area is situated in a strongly anthropized area (Marimon et al. 2006Marimon BS, Lima ES, Duarte TG, Chieregatto LC, Ratter JA. 2006. Observations on the vegetation of northeastern Mato Grosso, Brazil. IV. An analysis of the Cerrado-Amazonian forest ecotone. Edinburgh Journal of Botany 63: 323-341.), the correspondence between the environmental heterogeneity found throughout the Transition and our results demonstrate once again the utmost importance of conserving biogeographical transition zones.

Acknowledgements

This study was financed in part by the Coordenação de Aperfeiçoamento de Pessoal de Nível Superior-Brasil (CAPES) - Finance Code 001. We are also indebted with Professor Ary Teixeira de Oliveira-Filho, who provided the data used in our research.

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Publication Dates

  • Publication in this collection
    20 Mar 2020
  • Date of issue
    Jan-Mar 2020

History

  • Received
    19 Feb 2019
  • Accepted
    16 Oct 2019
Sociedade Botânica do Brasil SCLN 307 - Bloco B - Sala 218 - Ed. Constrol Center Asa Norte CEP: 70746-520 Brasília/DF. - Alta Floresta - MT - Brazil
E-mail: acta@botanica.org.br