Methods of sampling benthic invertebrates in lotic habitats: a spatial and temporal evaluation

Métodos de amostragem de invertebrados bentônicos em ambientes lóticos: uma avaliação espacial e temporal

Abstract

Aim

We compared the effectiveness of two sampling devices, the Surber sampler and the D-frame net, commonly used in the analysis of invertebrate fauna structure in biomonitoring programs. These programs use the response of benthic invertebrates to assess changes in aquatic ecosystems because they respond quickly to spatial and temporal variations. However, the lack of consensus on the best method of sampling the fauna may reduce the quality of these studies.

Methods

We evaluated both devices in four structurally different reaches of streams, two in places with preserved riparian vegetation and two occurring in places with many anthropic disturbances. We repeated the analysis at the dry season of two consecutive years.

Results

The two samplers were equally effective in analyzing the benthic fauna and sensitive enough to identify spatial and temporal variation in the structure of this fauna, influenced by the presence or absence of riparian vegetation, by the position of the reach with this vegetation (upstream or downstream of the reach without vegetation) and the characteristics of the substrate.

Conclusions

The analyzed fauna structure was similar for the two samplers, but we consider the use of Surber more advantageous and effective because it collects a smaller number of individuals, reducing the time of processing and identifying in the laboratory, and allows a better definition of the area sampled.

Keywords:
D-frame net; surber sampler; quantitative sampling; tropical stream

Resumo

Objetivo

Comparamos a eficácia de dois dispositivos de amostragem, o amostrador Surber e a Rede-D, comumente utilizados na análise da estrutura da fauna de invertebrados em programas de biomonitoramento. Esses programas utilizam a resposta dos invertebrados bentônicos para avaliar as mudanças nos ecossistemas aquáticos porque respondem rapidamente às variações espaciais e temporais. No entanto, a falta de consenso sobre o melhor método de amostragem da fauna pode reduzir a qualidade desses estudos.

Métodos

Avaliamos ambos os dispositivos em quatro trechos estruturalmente diferentes de riachos, dois em locais com vegetação ripária preservada e dois ocorrendo em locais com várias alterações antrópicas. Repetimos a análise na estação seca de dois anos consecutivos.

Resultados

Os dois amostradores foram igualmente eficazes na análise da fauna bentônica e sensíveis o suficiente para identificar variações espaciais e temporais na estrutura desta fauna, influenciada pela presença ou ausência de vegetação ripária, pela posição do trecho com essa vegetação (a montante ou jusante do trecho sem vegetação) e pelas características do substrato.

Conclusões

A estrutura da fauna analisada foi semelhante para os dois amostradores, mas consideramos o uso do Surber mais vantajoso e efetivo por amostrar um menor número de indivíduos, reduzindo o tempo de processamento e identificação no laboratório, e por permitir uma melhor definição da área amostrada.

Palavras-chave:
Rede-D; amostrador Surber; amostragem quantitativa; riacho tropical

1. Introduction

Biomonitoring programs use the response of organisms to assess changes in the environment, whether natural or arising from anthropogenic actions ( Buss et al., 2003 ). In these programs, benthic invertebrates are the most tested and used group because they are good indicators of environmental quality and are found in practically all aquatic habitats ( Buss et al., 2003 ; Mugnai et al., 2011 ; Siegloch et al., 2014 ; Buss et al., 2015 ).

In Brazil, although environmental agencies present suggestions for the use of biomonitoring, the lack of studies on sampling, sorting, identifying and analyzing standards reduces the quality of these methodologies ( Buss et al., 2003 ). The scarcity of resources and qualified professionals in environmental agencies creates difficulties on the establishment of these standards and makes important the support of universities and research centers in the construction of this knowledge ( Buss et al., 2003 ). In Brazil, there is still no consensus about the best model of biomonitoring protocol to apply, due in part to the scarcity of basic knowledge on the structure and functioning of aquatic communities, which greatly influences the choice of the best methodology to be used in these programs ( Buss et al., 2003 ). The two most used samplers are the D-frame aquatic net (kick net) and the Surber sampler, but according to Buss & Borges (2008) few studies compare the sampling efficiency of these two methodologies.

In addition, the habitat heterogeneity and the seasonal sampling period may influence the results, leading to differences in macroinvertebrate fauna structure ( Callanan et al., 2008 ). Therefore, understanding the efficiency of sampling techniques as well as the possible influence of regional and local factors on the results are of great importance for the improvement of biomonitoring models, necessary for the preservation of water resources in Brazil.

Thus, in the present work the aim was to compare the performance of the Surber and D-frame net samplers, commonly used in studies of stream benthic invertebrates, in the analysis of the structure of this fauna. The comparison was done in four structurally different stream reaches (spatial analysis), sampled in two consecutive years (temporal analysis).

2. Material and Methods

2.1. Study sites

We developed the study in two third-order streams belonging to the Paranapanema River Basin, located in the State of São Paulo, southeastern Brazil. Two reaches of each stream (Itaúna and Farias streams) were chosen for the study, one with, other without riparian vegetation, respectively called forest and open reaches ( Figure 1 ).

Figure 1
General view of the four study sites, two in Itaúna stream (A- with and B- without riparian vegetation) and two in Farias stream (C- with and B- without riparian vegetation).

The forest reach of Itaúna stream (23°09'30.8”S, 48°37'58.5”W) is inserted in a fragment of semi-deciduous forest, with a rocky margin, bed with a deposit of vegetal debris (leaves, branches and trunks) and with coarse substrate (> 16 mm, such as boulder, cobble and coarse gravel). Its open reach is located downstream (23°09'58.6”S; 48°37'32.9”W), with partially submerged grasses on the banks and bed, and predominance of fine substrate (<16 mm, such as medium to fine gravel, granule, sand, silt and clay). The two reaches of Itaúna stream also differ in terms of mean depth values (23.1 and 40.4 cm, respectively in forest and open) and width (489 and 196 cm).

The forest reach of Farias stream (23°01'9.8”S, 48°55'38.4”W) presents a semi-deciduous forest on the right margin and peanut grass (Arachis repens Handro, Fabaceae) on the left bank, interspersed with sparse trees planted for recovery of the native forest, and bed with predominance of fine substrate and with deposits of vegetal debris. Its open reach is located upstream (23°01'16.5”S, 48°55'6.3”W), in a place with several anthropic alterations, such as plantation of woody bamboo (Poaceae), margins with peanut grass or exposed soil, a dam located above the reach, and bed with predominance of fine substrate covered by rooted macrophytes (Egeria sp., Hydrocharitaceae). For this stream, the difference between the two reaches in terms of mean depth (52.6 and 43.4 cm, respectively) and width (2.2 and 1.7 cm) was not as striking.

2.2. Sampling

We sampled the benthic invertebrate fauna in the dry season of two consecutive years (October 2014 and August 2015). In 2014, three months of rainfall below 30 mm preceded the sampling date, although heavy rains occurred in early September, but at least three weeks before collection in October ( Figure 2 ). On the other hand, in 2015, the rainy season presented high rainfall rates (generally above 200 mm) and an atypical dry season occurred, with rainfall near or often above 100 mm, with the exception of June and August ( Figure 2 ).

Figure 2
Values of rainfall (mm) measured in the municipalities of Itatinga (Itaúna stream) and Avaré (Farias stream) in the two years in which the study was carried out, being indicated (*) the two months of collection in the dry season (October 2014 and August 2015).

We collected four sampling units with Surber (mesh 250 μm and area 900 cm² ) and three with D-frame net (mesh 250 μm and sampled area 1200 cm²), distributed along 100 m of each reach studied. In order to allow the comparison between the samplers, we standardized the collection sites (always in places with moderate current) and the total area sampled considering the sum of sampling units per sampler (3600 cm² by sampler). We conditioned the samples separately in properly labeled plastic bottles and fixed in 70% alcohol.

In the laboratory, we floated the samples to separate the invertebrates from the sediment through the density difference, using a sodium chloride solution (200 g.L^-1 ) ( Kuhlmann et al., 2012 ). The organisms found were screened and identified under a stereomicroscope and optical microscope at the lowest possible taxonomic level, with the aid of general identification keys ( Pennak, 1978 ; Dominguez & Fernández, 2009 ; Mugnai et al., 2010 ) and, when necessary, additional literature to identify insects at the genus level.

2.3. Data analysis

We performed all statistical analyzes separately by stream, comparing the types of samplers, in relation to reaches (spatial analysis) and years (temporal analysis), using the statistical package Primer version 6.1.12 & Permanova + version 1.0.2. The abundance data (sum of sampling units) of the total OTU’s identified (Operational Taxonomic Unit) was first transformed in log (x+1) and a Bray-Curtis similarity measure was used to create a resemblance matrix. With this matrix, we performed a Hierarchical Clustering analysis (group average) and a Principal Coordinates analysis (PCO) to explore and visualize the similarity between samplers (Surber, D-frame net), across reaches (forest and open) and years (2014, 2015).

3. Results

In general, the comparison between the samplers showed a higher abundance of invertebrates collected with the D-frame net for both streams ( Tables 1 and 2 ), being in general sampled twice as many individuals with this net. Regarding the richness, the difference between the samplers was not so marked and the percentage of rare OTU’s was higher than 60% in both reaches and streams.

Table 1
Relative abundance (%) of benthic invertebrates sampled in two reaches of Itaúna stream (O- open, F- forest) in 2014 and 2015, using two samplers (Surber and D-frame net). Data presented for the higher taxonomic groups, for the Hexapoda orders and for the total OTU’s sampled (rare = abundance <1%).

HIGHER GROUPS	O-2014		O-2015		F-2014		F-2015
	Surber	D-frame	Surber	D-frame	Surber	D-frame	Surber	D-frame
Platyhelminthes	0.05	0.04	0.00	0.00	0.00	0.00	0.09	0.17
Nemertea	0.55	0.00	0.00	0.19	0.00	0.01	0.19	0.08
Mollusca	3.45	4.41	0.38	0.56	0.68	1.17	0.93	0.11
Annelida	5.34	5.68	33.27	22.57	0.29	0.10	18.01	9.88
Nematoda	0.05	0.00	0.75	0.28	0.00	0.00	0.28	0.22
Chelicerata	11.59	17.13	1.88	3.60	1.39	2.80	2.60	6.37
Crustacea	0.95	2.54	0.56	0.84	0.00	0.09	1.02	1.44
Hexapoda	78.02	70.19	63.16	71.96	97.64	95.84	76.88	81.73
HEXAPODA ORDERS
Collembola	1.92	0.30	0.45	0.46	0.04	0.02	0.60	0.20
Coleoptera	2.69	1.87	8.63	9.24	2.45	1.13	3.50	4.84
Diptera	75.74	73.78	53.57	59.21	56.62	40.77	28.02	29.13
Ephemeroptera	15.43	18.73	30.51	22.77	16.24	31.87	60.51	59.32
Hemiptera	0.19	0.00	0.15	0.00	0.00	0.02	0.12	0.03
Lepidoptera	0.00	0.00	0.00	0.00	0.22	0.12	0.00	0.00
Megaloptera	0.00	0.00	0.00	0.00	0.00	0.01	0.00	0.03
Odonata	0.38	0.06	0.00	0.07	0.00	0.01	0.60	0.30
Plecoptera	0.00	0.00	1.34	3.19	0.18	0.08	0.60	0.68
Trichoptera	3.65	5.26	5.36	5.07	24.25	25.96	6.04	5.45
TOTAL OTU’s (82)
Total abundance	2002	2358	1064	2136	2800	9255	1077	3612
Relative abundance	45.92	54.08	33.25	66.75	23.23	76.77	22.97	77.03
Richness	39	36	37	41	29	42	42	56
% OTU´s rare	64.10	61.11	62.16	63.41	58.62	64.29	69.05	76.79

Table 2
Relative abundance (%) of benthic invertebrates sampled in two reaches of Farias stream (O- open, F- forest) in 2014 and 2015, using two samplers (Surber and D-frame net). Data presented for the higher taxonomic groups, for the Hexapoda orders and for the total OTU’s sampled (rare = abundance <1%).

HIGHER GROUPS	O-2014		O-2015		F-2014		F-2015
	Surber	D-frame	Surber	D-frame	Surber	D-frame	Surber	D-frame
Cnidaria	0.00	0.00	0.09	0.00	0.00	0.00	0.00	0.00
Platyhelminthes	0.07	0.00	0.09	0.04	0.00	0.00	0.00	0.00
Nemertea	0.07	0.10	0.09	0.07	0.00	2.03	0.73	0.00
Mollusca	0.74	1.16	0.61	0.70	10.00	10.14	32.85	36.11
Annelida	2.08	0.68	2.68	4.08	31.54	24.32	21.17	5.66
Nematoda	0.00	0.00	0.43	0.00	0.77	0.00	0.73	0.00
Chelicerata	1.86	1.16	0.35	0.30	5.38	3.38	0.00	0.67
Crustacea	0.37	0.82	0.26	0.11	3.08	2.03	3.65	2.50
Hexapoda	94.79	96.09	95.42	94.70	49.23	58.11	40.88	55.07
HEXAPODA ORDERS
Collembola	0.47	0.20	0.54	0.16	0.00	1.16	1.79	0.60
Coleoptera	11.07	5.89	10.24	11.59	9.38	11.63	3.57	4.23
Diptera	52.75	57.44	52.72	57.44	60.94	68.60	69.64	81.27
Ephemeroptera	30.53	28.77	23.46	19.54	29.69	13.95	12.50	9.06
Hemiptera	0.08	0.05	0.09	0.04	0.00	0.00	1.79	0.00
Lepidoptera	0.00	0.00	0.00	0.08	0.00	0.00	1.79	0.30
Odonata	0.08	0.86	0.72	0.82	0.00	2.33	0.00	0.91
Trichoptera	5.02	6.79	12.23	10.34	0.00	2.33	8.93	3.63
TOTAL OTU´s (54)
Total abundance	1344	2069	1157	2697	130	148	137	601
Relative abundance	39.38	60.62	30.02	69.98	46.76	53.24	18.56	81.44
Richness	23	31	33	29	19	18	21	28
% OTU´s rare	56.52	74.19	72.73	68.97	36.84	22.22	47.62	60.71

When analyzed the groups of invertebrates sampled in the Itaúna stream, the results obtained with the two samplers were similar. Hexapoda presented the highest relative abundance, represented mainly by the orders Diptera and Ephemeroptera ( Table 1 ). In that stream, it is also possible to highlight the high percentage of Annelida (open reach in 2015) and Trichoptera (forest reach in 2014).

The two samplers also responded in a similar way to the analysis of invertebrate groups collected in Farias stream. The results showed a predominance of Hexapoda in all cases analyzed, mainly of the orders Diptera and Ephemeroptera, and a high relative abundance of Mollusca (Bivalvia) and Annelida (Oligochaeta) in the forest reach ( Table 2 ).

The Hierarchical Clustering analysis and Principal Coordinates analysis applied to the abundance data reinforced the high similarity in the response of the two samplers for both streams. For Itaúna stream, the cluster ( Figure 3 A) grouped the Surber and D-frame with high values of similarity for both reaches and years. The two axis of the PCO explained 68.2% of total data variation ( Figure 3 B), approaching the samplers of the same reach/year, the PCO1 separating the reaches and PCO2 the years in opposite sides. For Farias stream, the cluster ( Figure 4 A) grouped the Surber and D-frame with high values of similarity for both years of open reach and for forest-2014 samples. The two axis of the PCO explained 74.8% of total data variation ( Figure 4 B), approaching the samplers of the same reach/year, the PCO1 separating the reaches and PCO2 the years in opposite sides.

Figure 3
Results of the Hierarchical Clustering analysis (A, with the percentage of similarity grouping the samplers) and Principal Coordinates analysis (B) constructed with data of total OTU’s sampled with Surber and D-frame net in reaches of Itaúna stream with (F-forest) and without (O-open) riparian vegetation, in 2014 and 2015.

Figure 4
Results of the Hierarchical Clustering analysis (A, with the percentage of similarity grouping the samplers) and Principal Coordinates analysis (B) constructed with data of total OTU’s sampled with Surber and D-frame net in reaches of Farias stream with (F-forest) and without (O-open) riparian vegetation, in 2014 and 2015.

4. Discussion

In biological monitoring, the selection of the sampler is one of the issues that may influence the conclusions of the study, since together with the processing of the samples and metrics to be applied it can lead to significantly different results ( Carter & Resh, 2001 ; Buss & Borges, 2008 ). Sampling methods used in biomonitoring programs should address issues such as cost-effectiveness, the time spent in sampling and sorting as a measure of cost, and richness as a measure of effectiveness ( Buss & Borges, 2008 ). Although the choice of the best methodology is still widely discussed in the literature, the D-frame net has been recommended and preferred in several countries ( Storey et al., 1991 ; Buss & Borges, 2008 ), allowing the collection of high taxa richness and providing accurate indexes ( Buss & Borges, 2008 ; Hughes & Peck, 2008 ).

Both samplers are low cost and easy to use, although some peculiarities are inherent to each of these two methodologies: the Surber sampler can be handled by only one person, the D-frame net needs two person but can be used at depths higher than 30 cm ( Buss & Borges, 2008 ).

In the present work, a high similarity in the response of the two samplers occurred even considering the occurrence of spatial (differences between streams and reaches) and temporal variation (two years). In terms of cost-effectiveness and biological conservation, the Surber proved to be more advantageous for having the same effectiveness of D-frame net in analyzing the fauna structure, but sampling a much smaller number of individuals.

The samplers also give the same results about the assemblage composition when considered the types of substrate in the streams and reaches. The greater richness of taxa in Itaúna stream can be related to the rocky substrate, as the heterogeneity of this substrate offers greater complexity and stability, stimulating the fauna diversity and abundance ( Kikuchi & Uieda, 2005 ). On the other hand, the sandy-clay substrate found in Farias stream can be related to the presence of tolerant groups like Oligochaeta and Bivalvia, frequently abundant in this unstable substrate that offers little availability of food and difficult of anchorage for several invertebrates ( Kikuchi & Uieda, 2005 ).

The similarity between samplers also persisted in relation to temporal variations. Seasonal variations in the habitat structure may also influence the pattern of invertebrate distribution, as the increase in rainfall can make it difficult for the individuals to remain in the substrate, due to increase in the speed of the current and consequent drag ( Kikuchi & Uieda, 2005 ; Bispo et al., 2006 ; Carvalho et al., 2008 ). The leaching process caused by the higher rainfall in 2015 drag sediment to the channel and could favored an increase in Oligochaeta abundance in the Itaúna stream, as these invertebrates are generally associated to the fine sediment deposited in the rocky bed. On the other hand, the low rainfall in 2014 may have favored an increase in the abundance of Simuliidae, whose larvae use the rocky substrate while filtering food carried by the current ( Kikuchi & Uieda, 2005 ).

Different types of anthropic impacts, such as total or partial removal of riparian vegetation, can cause a decrease in water quality and change in the invertebrate distribution pattern ( Roth et al., 1996 ; Yoshida & Rolla, 2012 ), based on the sensitivity and tolerance of each taxon to stress factors ( Mugnai et al., 2011 ; Yoshida & Rolla, 2012 ). Both samplers were effective in the search of those groups. Although Ephemeroptera is considered a group susceptible to environmental disturbances, it can colonize a variety of habitats, such as running water, rocky and sandy bottoms with litter accumulation ( Salles et al., 2004 ; Bispo et al., 2006 ; Bagatini et al., 2012 ). This versatility of the group may explain the high abundance of the mayfly genus Traverhyphes in two quite different streams and reaches studied. The higher abundance of Traverhyphes in the forest reach of Itaúna stream may be related to the occurrence of this group in rocky bottom streams, with vegetal debris and semi-deciduous riparian vegetation, a situation also observed by Kikuchi & Uieda (2005) and Siegloch et al. (2014) . On the other hand, high abundance of Traverhyphes also occurred in the open reach of Farias stream, where a dense bank of macrophytes covers the sandy-clay substrate. This aquatic vegetation contributes with an increase in the complexity and heterogeneity of the habitat, serving as shelter and feeding place for a diverse fauna ( Thomaz & Cunha, 2010 ).

In the present study, the position of the reaches with and without riparian vegetation also influenced the spatial analysis for both samplers. In Itaúna stream, the open reach receives the input of organic material and vegetable debris carried from the forest reach located upstream, and this material adheres to the marginal and submerged grass offering shelter and food and contributing to the high richness and abundance of invertebrates. For Farias stream, the sand and clay transported from the open reach deposits on the gravel substrate of the forest reach located downstream, reducing the availability of resources and habitat quality, and, consequently, the richness and abundance of invertebrates.

In summary, the two samplers were equally effective in analyzing the benthic invertebrates and sensitive enough to point to a spatial and temporal variation in the structure of this fauna, influenced by the presence of riparian vegetation, by type of substrate and position of the forest reach. The Surber and D-frame net are easy to handle in lotic environments, in rocky or sandy substrate, sampling litter or macrophyte, allowing qualitative and quantitative analysis of the fauna. Nevertheless, we consider the use of Surber more advantageous because it samples less individuals, reducing the time of processing and identifying in the laboratory (low cost and high effectiveness), and allows a more precise definition of the area sampled.

Acknowledgements

To Ana Liz U. Melo, Pedro S. Manoel, Fernando P. R. Arruda, Sílvio C. Almeida and Hamilton A. Rodrigues for assistance in field work.

• Cite as: Cunha, L.L et al. Methods of sampling benthic invertebrates in lotic habitats: a spatial and temporal evaluation. Acta Limnologica Brasiliensia, 2019, vol. 31, e4.

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Publication Dates

• Publication in this collection
  18 Feb 2019
• Date of issue
  2019

History

• Received
  05 Apr 2017
• Accepted
  18 Dec 2018