CHRNA5 polymorphism and susceptibility to lung cancer in a Chinese population

Abstract

Polymorphisms in the nicotinic acetylcholine receptor subunit CHRNA5 gene have been associated with lung cancer positive susceptibility in European and American populations. In the present hospital-based, case-control study, we determined whether polymorphism in rs503464 of CHRNA5 is associated with lung cancer risk in Chinese individuals. A single nucleotide polymorphism in CHRNA5 rs503464, c.-166T>A (hereafter T>A), was identified using TaqMan-MGB probes with sequencing via PCR in 600 lung cancer cases and 600 healthy individuals. Genotype frequencies for rs503464 (T>A) were in Hardy-Weinberg equilibrium for the control population. However, genotype frequencies were significantly different between cases and controls (P < 0.05), while allele frequencies were not significantly different between groups. Compared to homozygous genotypes (TT or AA), the risk of lung cancer in those with the heterozygous genotype (TA) was significantly lower (OR = 0.611, 95%CI = 0.486-0.768, P = 0.001). Using genotype AA as a reference, the risk of lung cancer for those with genotype TA was increased 1.5 times (OR = 1.496, 95%CI = 1.120-1.997, P = 0.006). However, no difference in risk was observed between T allele carriers and A allele carriers (OR = 0.914, 95%CI = 0.779-1.073, P = 0.270). Stratification analysis showed that the protective effect of TA was more pronounced in those younger than 60 years, nonsmokers, or those without a family history of cancer, as well as in patients with adenocarcinoma or squamous cell carcinoma in clinical stages III or IV (P < 0.05). Therefore, the heterozygous genotype c.-166T>A at rs503464 of CHRNA5 may be associated with reduced risk of lung cancer, thus representing a susceptibility allele in Chinese individuals.

Lung cancer; Nicotinic acetylcholine receptors; CHRNA5 gene; Single nucleotide polymorphisms

Introduction

Lung cancer, one of the most common malignant tumors, causes the highest number of cancer-related deaths (¹). In 2009 in the U.S.A. alone, 219,440 cases were newly diagnosed with lung cancer, and 159,390 deaths resulted from the disease. In China, the numbers are more staggering: in 2004 and 2005, the average numbers of cases of newly developed lung cancer and of lung cancer-related deaths were 483,040 and 420,411, respectively (²). The global threat of this disease marks it as a priority for developing new diagnostic, therapeutic, and prognostic approaches.

Lung cancer appears to result from the interaction between genetic susceptibility of the individual and risk factors in the environment; however, its pathogenesis has not been fully elucidated (³). Smoking is the most important risk factor for lung cancer, but individual lung cancer risk caused by genetic susceptibility has become a major research focus (³). Recently, genome-wide association studies of lung cancer conducted in European and American populations by three different research teams have identified that polymorphisms in the acetylcholine receptor subunit can confer genetic susceptibility to lung cancer (⁴- ⁶). Acetylcholine receptors can bind to tobacco carcinogens, such as nicotine and nitrosamines, in the body. Subsequently, activated nicotinic acetylcholine receptors can promote tumorigenic conversion of cells, angiogenesis, and cell growth, thereby contributing to tumor development ⁷). Among the identified loci of lung cancer susceptibility, polymorphisms in the nicotinic acetylcholine receptor gene CHRNA5, including rs16969968 and rs503464, are closely associated with lung cancer (⁸- ¹⁰). Indeed, these variants influence nicotine addiction and correlate with cancer risk through increased smoking (¹¹). The rs503464 variant (T>A) appears to affect transcription of CHRNA5, offering a potential mechanism for its association with cancer (¹²). However, association studies have focused solely on European and American populations. Moreover, one polymorphism identified in those studies, rs16969968, occurs less frequently and is not correlated with the occurrence of lung cancer in Asian populations (¹⁰). Therefore, in this study a possible association between the CHRNA5 polymorphism rs503464 and lung cancer was investigated using a case-control population of Chinese individuals to determine the relationship between the CHRNA5 polymorphism and genetic susceptibility to lung cancer in China.

Material and Methods

Participants

Samples from cases of primary lung cancer (n = 600) were collected from Jiangsu Cancer Hospital of Nanjing city from January 2008 to February 2011. Another 600 healthy individuals, 444 men and 156 women, who received physical examination at our hospital were selected for a control group. All patients and controls were of the Chinese Han population. Lung cancer patients were included in the study only if they had been diagnosed according to the guidelines of Diagnostic and Treatment Practices of Primary Lung Cancer by the Ministry of Health of the People's Republic of China in 2011 and had no other tumor history. There were 213 cases with adenocarcinoma, 208 with squamous cell carcinoma, 26 with large cell carcinoma, 74 with small cell carcinoma, and 79 cases with other pathological types. Eighty cases were in clinical stage I, 53 were in stage II, 203 in stage III, and 264 in stage IV. Subjects in the two groups were matched for age and gender. Written informed consent was obtained from all participants in this study, or from their family members. The study was approved by the Ethics Committee of the Jiangsu Cancer Hospital.

Epidemiological survey

Participants responded to an epidemiological survey, which included questions regarding age, gender, individual history of occupational exposure, medical history, family history of cancer, and diet/nutrition status. Smoking status included smoking or non-smoking, daily number of cigarettes, years of smoking, and smoking status of the surrounding population. Nonsmokers were defined as those who smoked less than one cigarette per day, and the cumulative smoking period throughout their life was less than 1 year; all others were considered to be smokers. Those who had quit smoking for more than 1 year were considered to be quitters, i.e., nonsmokers.

Genotyping

DNA extraction. Five milliliters of peripheral venous blood was collected from each participant into tubes containing sodium heparin anticoagulant. Genomic DNA was extracted from 2 mL peripheral blood using 0.1-20 mL blood genomic DNA extraction system (DP319-01, Tiangen Biochemical Science and Technology, China) according to manufacturer instructions.

Genotyping. The SNP database (http://www.ncbi.nlm.nih.gov/snp) was used to determine genome sequences at the CHRNA5 rs503464 (c.-166T>A; hereafter “T>A”) locus. TaqMan-MGB probes (Applied Biosystems, USA) were used for sequencing to detect rs503464 (T>A) genotypes in CHRNA5. Genotype results were independently observed by two experimenters and then entered into the computer.

Statistical analysis

The SPSS17.0 statistical software was used for statistical analysis. The two-sample t-test was used to compare age between the two groups, and the X² test to compare gender, smoking, family history of cancer, and genotype and allele frequencies between the two groups. The correlation between polymorphisms and lung cancer risk was analyzed by the odds ratio (OR) and its 95% confidence interval (CI) obtained by unconditional logistic regression analysis. P < 0.05 was considered to be statistically significant.

Results

Participant characteristics

The study was conducted on 600 healthy individuals in the control group and 600 patients with lung cancer. The distributions of age, gender, smoking status, and family history of cancer are reported in Table 1. The mean age of the individuals was 59.9 ± 5.3 years for cases and 60.4 ± 5.4 years for controls. Lung cancer more commonly affects males, and the male:female ratio in each group was approximately 3:1. The proportion of smokers was higher in the patient group than in the control group (58.7 vs 48.7%, respectively). Statistical analysis indicated no significant difference in age, gender, or family history of cancer between the patient group and the control group, but the difference in smoking history was statistically significant between the two groups (P < 0.05).

Table 1
Comparison of the basic characteristics of the patient and control groups.

• The two-sample t-test was used to compare age between the two groups and the X² test was used for all other variables.

Genotype and allele frequencies

Genotypes and alleles for rs503464 were in Hardy-Weinberg equilibrium in the control population (P < 0.05). However, the difference in genotype frequencies was statistically significant between the patient group and the control group (P < 0.05; Table 2). Using genotype TT as a reference, the risk of lung cancer for those with genotype TA was reduced by 43.7% (OR = 0.563, 95%CI = 0.425-0.745, P = 0.001), while genotype AA did not affect the risk of lung cancer (OR = 0.841, 95%CI = 0.600-1.181, P = 0.318). Using genotype AA as a reference, the risk of lung cancer for those with genotype TA was increased by 1.5 times (OR = 1.496, 95%CI = 1.120-1.997, P = 0.006), while genotype TT did not affect the risk of lung cancer (OR = 0.841, 95%CI = 0.600-1.181, P = 0.318). Using homozygous genotypes (TT and AA) as a reference, the risk of lung cancer for those with the heterozygous genotype (TA) was reduced by 38.9% (OR = 0.611, 95%CI = 0.486-0.768, P = 0.001). No statistically significant difference in allele frequency was observed between the two groups; compared to the T allele, having the A allele did not change the risk of lung cancer (OR = 0.914, 95%CI = 0.779-1.073, P = 0.270).

Table 2
Comparison of genotype and allele frequency between patients and controls.

• Data are reported as number with percent in parentheses. Unconditional multiple logistic regression was used for statistical analysis.

Genotype frequency and lung cancer susceptibility

Stratified analyses were performed according to age, gender, smoking status, and family history of cancer (Table 3). Results revealed that, among those ≤60 years old, the heterozygous genotype TA significantly reduced the risk of lung cancer (OR = 0.469, 95%CI = 0.337-0.654) compared to the homozygous genotypes (TT and AA). The heterozygous genotype TA had a protective effect among both males and females (males, OR = 0.703, 95%CI = 0.541-0.913; females, OR = 0.394, 95%CI = 0.244-0.635). Similarly, among nonsmokers and those without a family history of cancer, the heterozygous genotype TA also had a protective effect (nonsmokers, OR = 0.424, 95%CI = 0.300-0.600; no family history, OR = 0.623, 95%CI = 0.489-0.795). However, among those >60 years old, smokers, and those with a family history of cancer, the heterozygous genotype TA had no protective effect.

Table 3
Association between genotype frequency and risk of lung cancer.

• Data are reported as number with percent in parentheses. Unconditional multiple logistic regression was used for statistical analysis.

Genotype frequency according to tumor characteristics

Stratified analyses were performed for the association between genotype frequency and tumor characteristics, specifically pathological type and clinical stage. The risk of lung adenocarcinoma (OR = 0.611, 95%CI = 0.446-0.837, P = 0.002) and lung squamous cell carcinoma (OR = 0.571, 95%CI = 0.415-0.784, P = 0.001) for those with the heterozygous genotype (TA) were lower than for those with homozygous genotypes (TT and AA), but no significant difference was observed in large cell carcinoma, small cell carcinoma, or other pathological types. Compared to patients with homozygous genotypes (TT and AA), patients with the heterozygous genotype (TA) had a lower risk in clinical stage III (OR = 0.541, 95%CI = 0.392-0.746, P = 0.001) and IV (OR = 0.596, 95%CI = 0.445-0.798, P = 0.001), but no significant differences were observed for stages I and II (Table 4).

Table 4
Association between genotype frequency and type of pathology and clinical stage.

• Data are reported as number with percent in parentheses. Unconditional multiple logistic regression was used for statistical analysis.

Discussion

Smoking is the major environmental risk factor for lung cancer because cigarettes contain strong carcinogens such as empyreumatic oil and benzo(a)pyrene (¹³). These substances induce activation of cancer-related signaling pathways by binding the corresponding receptors or by metabolism in the body. It is unknown whether tobacco, a main component of cigarettes, can cause cancer directly, but, because tobacco contains the addictive substance nicotine, smokers are susceptible to high exposures to tobacco and the carcinogens in cigarettes (¹⁴).

Nicotine is an alkaloid that is transported in the body through specific nicotine receptors. Nicotinic receptors can activate Akt molecular channels following stimulation with nicotine to prevent cancer cells and other abnormal cells from escaping programmed cell death, thereby promoting tumorigenesis (¹⁵). The nicotinic acetylcholine receptor subunit A family (CHRNA) encodes receptors that are activated upon nicotine binding. Indeed, they are expressed in the core region of the brain that is closely related to nicotine addiction (¹⁰, ¹⁶). Receptors distributed in lung epithelial cells are involved in signal transduction of nicotine and tobacco carcinogens and can promote cell proliferation and metastasis of cancer cells (¹⁷- ¹⁹). Previous research on two of the genes in this family, CHRNA5 and CHRNA3, demonstrated associations of polymorphisms in these genes with lung cancer susceptibility in smokers (⁹). Specifically, one study of rs503464 suggested that the heterozygous TA genotype may lead to an allelic expression imbalance that alters gene activity (¹²).

In the present case-control study of 600 patients with lung cancer and 600 healthy controls, a significant difference in distribution of rs503464 (c.-166T>A) genotype frequency for CHRNA5 was observed between groups, but no statistically significant difference was observed in allele frequency. Compared to individuals with a homozygous genotype (TT or AA), those exhibiting the heterozygous genotype TA had a reduced risk of lung cancer, indicating that polymorphisms in this locus are associated with lung cancer risk. Furthermore, stratified analyses showed that the heterozygous genotype TA was protective for those <60 years of age, nonsmokers, and those without a family history of cancer. Thus, rs503464 of CHRNA5 may be a susceptibility locus for lung cancer in Chinese individuals. Specifically, the heterozygous genotype TA appears to confer a reduced risk of lung cancer, especially for younger individuals, nonsmokers, and those without a family history of cancer, as well as patients with adenocarcinoma or squamous cell carcinoma or in clinical stages III or IV. It is possible that, as previously suggested (¹², the heterozygous genotype TA results in allelic expression imbalance that influences gene transcription or activity. Further experimental exploration is necessary to identify mechanisms by which polymorphism in this locus controls the expression of CHRNA5 and contributes to the pathogenesis of lung cancer.

Research supported by Jiangsu Provincial Health Department (Grant #Z200902).

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• First published online January 11, 2013.

Publication Dates

• Publication in this collection
  11 Jan 2013
• Date of issue
  Jan 2013

History

• Received
  24 June 2012
• Accepted
  26 Oct 2012