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Genetics and Molecular Biology

Print version ISSN 1415-4757On-line version ISSN 1678-4685

Abstract

REIS, Marcelo S.; TAKITA, Marco A.; PALMIERI, Darío A.  and  MACHADO, Marcos A.. Bioinformatics for the Citrus EST Project (CitEST). Genet. Mol. Biol. [online]. 2007, vol.30, n.3, suppl., pp.1024-1029. ISSN 1415-4757.  https://doi.org/10.1590/S1415-47572007000500031.

In this work we describe all the computational environments, pipelines, and web services developed for the CitEST transcriptome project, on which all the annotation researchers relied. We also present a complete list of CitEST libraries and, for each of them, the general features after the in silico processing, showing some quantitative information.

Keywords : transcriptomics; comparative genomics; clustering; trimming; digital northern.

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