Fusobacterium nucleatum
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F: CTT AGG AAT GAG ACA GAG ATG |
56 |
120 |
Periasamy et al. (2009)Periasamy S, Chalmers NI, Du-Thumm L et al. (2009). Fusobacterium nucleatum ATCC 10953 requires Actinomyces naeslundii ATCC 43146 for growth on saliva in a three-species community that includes Streptococcus oralis. Appl Environ Microbiol 75:3250-3257
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R: TGA TGG TAA CAT ACG AAA GG |
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Porphyromonas gingivalis
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F: ACC TTA CCC GGG ATT GAA ATG |
60 |
83 |
Nonnenmacher et al. (2005)Nonnenmacher C, Dalpke A, Rochon J et al. (2005) Real-time polymerase chain reaction for detection and quantification of bacteria in periodontal patients. J Periodontol 6:1542-1549
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R: CAA CCA TGC AGC ACC TAC ATA GAA |
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Prevotella intermedia
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F: CGT GGA CCA AAG ATT CAT CGG TGGA |
55 |
259 |
Okamoto et al. (1999)Okamoto M, Maeda N, Kondo K et al. (1999) Hemolytic and hemagglutinating activities of Prevotella intermedia and Prevotella nigrescens. FEMS Microbiol Lett 178:299-304
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R: CCG CTT TAC TCC CCA ACA AA |
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Clostridium difficile
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F: ATT AGG AGG AAC ACC AGT TG |
56 |
307 |
Kang et al. (2010)Kang S, Stuart E, Denman SE et al. (2010) Dysbiosis of fecal microbiota in Crohn's disease patients as revealed by a custom phylogenetic microarray. Inflamm Bowel Dis 16:2034-2042
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R: AGG AGA TGT CAT TGG GAT GT |
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Clostridium perfringens
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F: TCA TCA TTC AAC CAA AGG AGC AAT CC |
60 |
105 |
Siragusa and Wise (2007)Siragusa GR, Wise MG (2007) Quantitative analysis of the intestinal bacterial community in one- to three-week-old commercially reared broiler chickens fed conventional or antibiotic-free vegetable-based diets. J Appl Microbiol 102:1138-1149
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R: CCT TGG TAG GCC GTT ACC C |
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Bacteroides fragilis
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F: TCR GGA AGA AAG CTT GCT |
56 |
162 |
Tong et al. (2011)Tong J, Liu C, Summanen P et al. (2011) Application of quantitative real-time PCR for rapid identification of Bacteroides fragilis group and related organisms in human wound samples. Anaerobe 17:64-68
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R: CAT CCT TTA CCG GAA TCC T |
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Bacteroides vulgatus
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F: GCA TCA TGA GTC CGC ATG TTC |
60 |
287 |
Wang et al. (1996)Wang RF, Cao W, Cerniglia CE (1996) PCR Detection and quantitation of predominant anaerobic bacteria in human and animal fecal samples. App Envir Microbiol 4:1242-1247
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R: TCC ATA CCC GAC TTT ATT CCT T |
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Parabacteroides distasonis
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F: GTC GGA CTA ATA CCG CAT GAA |
60 |
273 |
Wang et al. (1996)Wang RF, Cao W, Cerniglia CE (1996) PCR Detection and quantitation of predominant anaerobic bacteria in human and animal fecal samples. App Envir Microbiol 4:1242-1247
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R: TTA CGA TCC ATA GAA CCT TCA T |
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Lactobacillus spp. |
F: AGC AGT AGG GAA TCT TCC A |
60 |
380 |
Ponnusamy et al. (2011)Ponnusamy K, Choi JN, Kim J et al. (2011) Microbial community and metabolomic comparison of irritable bowel syndrome faeces. J Med Microbiol 60:817-827
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R: ATT YCA CCG CTA CAC ATG |
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Bifidobacterium spp. |
F: GCG TGC TTA ACA CAT GCA AGT C |
60 |
125 |
Ponnusamy et al. (2011)Ponnusamy K, Choi JN, Kim J et al. (2011) Microbial community and metabolomic comparison of irritable bowel syndrome faeces. J Med Microbiol 60:817-827
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R: CAC CCG TTT CCA GGA GCT ATT |
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Escherichia coli
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F: AGA AGC TTG CTC TTT GCT GA |
57 |
120 |
Lee et al. (2010)Lee DH, Bae JE, Lee JH et al. (2010) Quantitative detection of residual Escherichia coli host cell DNA by Real-time PCR. J Microbiol Biotechnol 20:1463-1470
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R: CTT TGG TCT TGC GAC GTT AT |
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