Mesophilic fermentative bacteria (37 °C)
|
LIND8L2 |
Clostridium novyi
|
AB041865 |
Soil and feces |
Sasaki et al. 4949 Sasaki Y,Takikawa N, Kojima A, Norimatsu M, Suzuki S, Tamura Y.Phylogenetic positions of Clostridium novyi and Clostridium haemolyticum based on 16S rDNA sequences. Int J Syst Evol Microbiol. 2001;51(Pt 3):901-904.
|
96% |
LIND7H
|
Parabacteroides merdae
|
AB238928 |
Human feces |
Johnson et al. 5151 Johnson JL, Moore WEC, Moore LVH. Bacteroides caccae sp. nov., Bacteroides merdae sp. nov., and Bacteroides stercoris sp. nov. isolated from human feces. Int J Syst Bacteriol. 1986;36:499-501.
|
91% |
LIND8A |
Clostridium sp 13A1
|
AY554421 |
Anaerobic bioreactor treating cellulose waste |
Burrell et al. 5050 Burrell PC. The isolation of novel anaerobic cellulolytic bacteria from a landfill leachate bioreactor. Unpublished. 2004.
|
99% |
LINBA |
Clostridium sp D3RC-2
|
DQ852338 |
Rumen yak china |
Zhang et al. 4848 Zhang K, Song L, Dong X. Proteiniclasticum ruminis gen. nov., sp. nov., a strictly anaerobic proteolytic bacterium isolated from yak rumen. Int J Syst Evol Microbiol. 2010;60(Pt 9):2221-2225.
|
99% |
LINBL1 |
Clostridium sp D3RC-2
|
DQ852338 |
Rumen yak china |
Zhang et al. 4848 Zhang K, Song L, Dong X. Proteiniclasticum ruminis gen. nov., sp. nov., a strictly anaerobic proteolytic bacterium isolated from yak rumen. Int J Syst Evol Microbiol. 2010;60(Pt 9):2221-2225.
|
99% |
LINBA2 |
Clostridium sp D3RC-2
|
DQ852338 |
Rumen yak china |
Zhang et al. 4848 Zhang K, Song L, Dong X. Proteiniclasticum ruminis gen. nov., sp. nov., a strictly anaerobic proteolytic bacterium isolated from yak rumen. Int J Syst Evol Microbiol. 2010;60(Pt 9):2221-2225.
|
99% |
LIND8A |
Clostridium sp D3RC-2
|
DQ852338 |
Rumen yak china |
Zhang et al. 4848 Zhang K, Song L, Dong X. Proteiniclasticum ruminis gen. nov., sp. nov., a strictly anaerobic proteolytic bacterium isolated from yak rumen. Int J Syst Evol Microbiol. 2010;60(Pt 9):2221-2225.
|
96% |
|
Thermophilic fermentative bacteria (55 °C)
|
LIND6LT2
|
Parasporobacterium paucivorans
|
AJ272036 |
Anaerobic digestor treating solid waste |
Lomans et al. 5757 Lomans BP, Leijdekkers P Wesselink JJ, et al. HJ. Obligate sulfide-dependent degradation of methoxylated aromatic compounds and formation of methanethiol and dimethyl sulfide by a freshwater sediment isolate, Parasporobacterium paucivorans gen. nov., sp. nov. Appl Environ Microbiol. 2001;67:4017-4023.
|
87% |
LIND8AT |
Uncultured bacterium
|
DQ125705 |
Soils contaminated with uranium waste |
Brodie et al. 5959 Brodie EL, Desantis TZ, Joyner DC, et al. Application of a high-density oligonucleotide microarray approach to study bacterial population dynamics during uranium reduction and reoxidation. Appl Environ Microbiol. 2006;72:6288-6298.
|
97% |
LINBAT1 |
Uncultured bacterium
|
AF280825 |
Anaerobic digestor treating pharmaceutical wastes |
Lapara et al. 6060 LaPara TM, Nakatsu CH, Pantea L, Alleman JE. Phylogenetic analysis of bacterial communities in mesophilic and thermophilic bioreactors treating pharmaceutical wastewater. Appl Environ Microbiol. 2000;66:3951-3959.
|
99% |
LINBLT2 |
Uncultured bacterium
|
AF280825 |
Anaerobic digestor treating pharmaceutical wastes |
Lapara et al. 6060 LaPara TM, Nakatsu CH, Pantea L, Alleman JE. Phylogenetic analysis of bacterial communities in mesophilic and thermophilic bioreactors treating pharmaceutical wastewater. Appl Environ Microbiol. 2000;66:3951-3959.
|
98% |
LIND4FT1 |
Caloramator coolhaasii
|
AF104215 |
Anaerobic thermophilic granular sludge |
Plugge et al. 6161 Plugge CM, Zoetendal EG, Stams AJ. Caloramator coolhaasii sp. nov., a glutamate-degrading, moderately thermophilic anaerobe. Int J Syst Evol Microbiol. 2000;50(Pt 3):1155-1162.
|
96% |
LIND8HT |
Lutispora thermophila
|
AB186360 |
Thermophilic bioreactor digesting municipal solid wastes |
Shiratori et al. 6262 Shiratori H, Ohiwa H, Ikeno H, et al. Lutispora thermophila gen. nov., sp. nov., a thermophilic, spore-forming bacterium isolated from a thermophilic methanogenic bioreactor digesting municipal solid wastes. Int J Syst Evol Microbiol. 2008;58(Pt 4):964-969.
|
99% |
LINBLT |
Clostridium thermosuccinogenes
|
Y18180 |
Cattle manure, beet pulp, soil, sediment pond |
Stackebrandt et al. 7272 Stackebrandt E, Kramer I, Swiderski J, Hippe H. Phylogenetic basis for a taxonomic dissection of the genus Clostridium. FEMS Immunol Med Microbiol. 1999;24:253-258.
|
98% |
LINBHT2 |
Clostridium tertium
|
Y18174 |
Open war wounds |
Stackebrandt et al. 7272 Stackebrandt E, Kramer I, Swiderski J, Hippe H. Phylogenetic basis for a taxonomic dissection of the genus Clostridium. FEMS Immunol Med Microbiol. 1999;24:253-258.
|
98% |
|
Mesophilic sulphate-reducing bacteria (37 °C)
|
LINBL |
Desulfobulbus propionicus
|
AY548789 |
Fluidized-bed reactors treating acidic, metal-containing wastewater |
Kaksonen 6767 Kaksonen AH. Diversity and community fatty acid profiling of sulfate-reducing fluidized-bed reactors treating acidic, metal-containing wastewater. Geomicrobiol J. 2004;21: 469-480.
|
99% |
LINBH |
Desulfovibrio vulgaris
|
AE017285 |
Soil, animal intestines and feces, fresh and salt water |
Heidelberg et al. 6868 Heidelberg JF, Seshadri R, Haveman SA, et al. The genome sequence of the anaerobic, sulfate-reducing bacterium Desulfovibrio vulgaris Hildenborough. Nat Biotechnol. 2004;22:554-559.
|
99% |
LINBH2 |
Desulfovibrio vulgaris
|
AE017285 |
Soil, animal intestines and feces, fresh and salt water |
Heidelberg et al. 6868 Heidelberg JF, Seshadri R, Haveman SA, et al. The genome sequence of the anaerobic, sulfate-reducing bacterium Desulfovibrio vulgaris Hildenborough. Nat Biotechnol. 2004;22:554-559.
|
99% |
LINBA1 |
Desulfomicrobium baculatum
|
AJ277895 |
Water-saturated manganese carbonate ore |
Hippe 7373 Hippe H. Reclassification of Desulfobacterium macestii as a member of the genus Desulfomicrobium: Desulfomicrobium macestense comb. nov., nom. Corrig. Unpublished. 2000.
|
99% |
LINBH1 |
Desulfomicrobium baculatum
|
AJ277895 |
Water-saturated manganese carbonate ore |
Hippe 7373 Hippe H. Reclassification of Desulfobacterium macestii as a member of the genus Desulfomicrobium: Desulfomicrobium macestense comb. nov., nom. Corrig. Unpublished. 2000.
|
99% |
|
Thermophilic sulphate-reducing bacteria (55 °C)
|
LINBHT1
|
Desulfotomaculum halophilum
|
U88891 |
Oil production facilities |
Tardy-Jacquenod et al. 6969 Tardy-Jacquenod C, Magot M, Patel BKC, Matheron R, Caumette P. Desulfotomaculum halophilum sp. nov., a halophilic sulfate-reducing bacterium isolated from oil production facilities. Int J Syst Bacteriol. 1998;48(Pt 2):333-338.
|
89% |