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Crop Breeding and Applied Biotechnology

versão impressa ISSN 1518-7853versão On-line ISSN 1984-7033

Resumo

MATIAS, Filipe Inácio; GRANATO, Italo Stefanine Correa; DEQUIGIOVANNI, Gabriel  e  FRITSCHE-NETO, Roberto. Be-Breeder - an application for analysis of genomic data in plant breeding. Crop Breed. Appl. Biotechnol. [online]. 2017, vol.17, n.1, pp.54-58. ISSN 1518-7853.  http://dx.doi.org/10.1590/1984-70332017v17n1n8.

Be-Breeder is an application directed toward genetic breeding of plants, developed through the Shiny package of the R software, which allows different phenotype and molecular (marker) analysis to be undertaken. The section for analysis of molecular data of the Be-Breeder application makes it possible to achieve quality control of genotyping data, to obtain genomic kinship matrices, and to analyze genome selection, genome association, and genetic diversity in a simple manner on line. This application is available for use in a network through the site of the Allogamous Plant Breeding Laboratory of ESALQ-USP (http://www.genetica.esalq.usp.br/alogamas/R.html).

Palavras-chave : Quality control; kinship matrix; genome selection; genetic diversity; SNP.

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