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Protein extraction methods of tomato, environmental changes of the Amazon Forest in Roraima (northernmost part of Brazil) for the last 1000 years, and histological characteristics of a dolphin species

The large-scale study of proteins focusing on their structures and functions is an area that has been growing fast in the last decades, including its application in Agrarian Sciences (e.g., Arruda et al. 2013ARRUDA SCC, BARBOSA HB, AZEVEDO RA AND ARRUDA MAZ. 2013. Comparative studies focusing on transgenic through cp4EPSPS gene and non-transgenic soybean plants: An analysis of protein species and enzymes. J Proteomics 93: 107-116.). Concerning plant specimens, there is a need for special attention on how to apply proteomic techniques since each tissue has specific properties, making the preparation of the samples a critical part of the whole process (e.g., Tabb 2013TABB DL. 2013. Quality assessment for clinical proteomics. Clin Biochem 46: 411-420.). The present issue of the Annals of the Brazilian Academy of Sciences(AABC) has a study that evaluates methods used in the extraction of proteins focusing on proteomic studies of tomato leaves and roots. Milca Vilhena and colleagues observed that there are no clear protocols regarding the preparation of tomato samples for this kind of study (Vilhena et al. 2015VILHENA MB, FRANCO MR, SCHMIDT D, CARVALHO G AND AZEVEDO RA. 2015. Evaluation of protein extraction methods for enhanced proteomic analysis of tomato leave and roots. An Acad Bras Cienc 87: 1853-1863.). Therefore, these authors have analyzed the four main protocols available, observing large differences regarding protein extraction. They further point out that these techniques might also be applied to other plant species such as eggplant and pepper.

It has become general knowledge that the Amazon tropical forest is very important regarding world biodiversity and carbon cycle (e.g., Clark 2004CLARK DA. 2004. Sources or sinks? The responses of tropical forests to current and future climate and atmospheric composition. Philos Trans R Soc London Ser B 359: 477-491.), and there have been several attempts to understand how the landscape has evolved over time, particularly regarding changes in floristic composition (e.g., Castro et al. 2013CASTRO DF, DE OLIVEIRA PE, ROSSETTI DF AND PESSENDA LCR. 2013. Late Quaternary landscape evolution of northeastern Amazonia from pollen and diatom records. An Acad Bras Cienc 85: 35-55.). On the other hand, it is also well-known that the progression of the savannization has a long-lasting impact in the area (e.g., Senna et al. 2014SENNA MCA, COSTA MH, DAVIDSON EA AND NOBRE CA. 2014. Modeling the impact of net primary production dynamics on postdisturbance Amazon savannization. An Acad Bras Cienc 86: 621-632.). In a very interesting study, Maria E.N.S. Meneses and colleagues have analyzed the environmental changes for over 1000 years of the Amazon forest located in the state of Roraima (Meneses et al. 2015MENESES MENS, COSTA ML, ENTERS D AND BEHLING H. 2015. Environmental changes during the last millennium based on multiproxy palaeoecological records in a savanna-forest mosaic from the northernmost Brazilian Amazon region. An Acad Bras Cienc 87: 1623-1651.). Using multiple lines of evidence such as geochemistry and palinological data from three different sediment cores, these authors were able to establish the vegetation dynamic in the last millennium in this region, providing some explanations on how the current sharp boundaries between the forest and savanna ecosystems have been maintained.

Dolphins comprise a group of Cetacean mammals fully adapted to an aquatic lifestyle and are observed quite frequently along the Brazilian coast (e.g., Cremer et al. 2013CREMER MJ, SARTORI CM, SCHULZE B, PAITACH RL AND HOLZ AC. 2013. First record of an anomalously colored franciscana dolphin, Pontoporia blainvillei. An Acad Bras Cienc 86: 1221-1225.). Economic activity regarding these animals has been growing, with some being used even in the tourism industry (e.g., Alves et al. 2013ALVES LCPS, ZAPPES CA, OLIVEIRA RG, ANDRIOLO A AND AZEVEDO AF. 2013. Perception of local inhabitants regarding the socioeconomic impact of tourism focused on provisioning wild dolphins in Novo Airão, Central Amazon, Brazil. An Acad Bras Cienc 85: 1577-1591.). It is therefore quite remarkable that numerous aspects of the reproductive morphology of several species of these cetaceans remain unknown, particularly regarding Sotolia guianensisvan Bénéden, 1864. Also known as the Goiana dolphin, this species is considered the most common dolphin in the Atlantic Ocean.

Some reproductive aspects of dolphins in general were obtained through macroscopic observations (e.g., Ramos et al. 2000RAMOS RMA, DI BENEDITTO APM AND LIMA NRWL. 2000. Growth parameters of Pontoporia blainvillei and Sotalia fluviatilis (Cetacea) in northern Rio de Janeiro, Brazil. Aquatic Mammals 26: 65-75., Katsumata 2010KATSUMATA E. 2010. Study on Reproduction of Captive Marine Mammals. J Reprod Dev 56: 1-8.), but studies addressing the microscopic anatomy of their reproductive organs are scarce (Becegato et al. 2015BECEGATO EZ, ANDRADE JP, GUIMARÃES JP, VERGARA-PARENTE JE, MIGLINO MA AND DE OLIVEIRA E SILVA FM. 2015. Reproductive morphology of female Guiana dolphins (Sotalia guianensis). An Acad Bras Cienc 87: 1727-1736.). In order to contribute to a better understanding of the reproductive morphology of the Guiana dolphin, Estella Z. Becegato and colleagues have analyzed histological tissues collected from female genital tract of specimens that were found stranded in the state of Sergipe, northeastern Brazil. The animals used in their study belong of different ages when they died. Although most of the histological structures observed are similar to the ones reported in terrestrial mammals, Becegato et al. (2015) found some differentiated cells is some parts of the reproductive system that had not been reported in cetaceous before.

REFERENCES

  • ALVES LCPS, ZAPPES CA, OLIVEIRA RG, ANDRIOLO A AND AZEVEDO AF. 2013. Perception of local inhabitants regarding the socioeconomic impact of tourism focused on provisioning wild dolphins in Novo Airão, Central Amazon, Brazil. An Acad Bras Cienc 85: 1577-1591.
  • ARRUDA SCC, BARBOSA HB, AZEVEDO RA AND ARRUDA MAZ. 2013. Comparative studies focusing on transgenic through cp4EPSPS gene and non-transgenic soybean plants: An analysis of protein species and enzymes. J Proteomics 93: 107-116.
  • BECEGATO EZ, ANDRADE JP, GUIMARÃES JP, VERGARA-PARENTE JE, MIGLINO MA AND DE OLIVEIRA E SILVA FM. 2015. Reproductive morphology of female Guiana dolphins (Sotalia guianensis). An Acad Bras Cienc 87: 1727-1736.
  • CASTRO DF, DE OLIVEIRA PE, ROSSETTI DF AND PESSENDA LCR. 2013. Late Quaternary landscape evolution of northeastern Amazonia from pollen and diatom records. An Acad Bras Cienc 85: 35-55.
  • CLARK DA. 2004. Sources or sinks? The responses of tropical forests to current and future climate and atmospheric composition. Philos Trans R Soc London Ser B 359: 477-491.
  • CREMER MJ, SARTORI CM, SCHULZE B, PAITACH RL AND HOLZ AC. 2013. First record of an anomalously colored franciscana dolphin, Pontoporia blainvillei. An Acad Bras Cienc 86: 1221-1225.
  • KATSUMATA E. 2010. Study on Reproduction of Captive Marine Mammals. J Reprod Dev 56: 1-8.
  • MENESES MENS, COSTA ML, ENTERS D AND BEHLING H. 2015. Environmental changes during the last millennium based on multiproxy palaeoecological records in a savanna-forest mosaic from the northernmost Brazilian Amazon region. An Acad Bras Cienc 87: 1623-1651.
  • RAMOS RMA, DI BENEDITTO APM AND LIMA NRWL. 2000. Growth parameters of Pontoporia blainvillei and Sotalia fluviatilis (Cetacea) in northern Rio de Janeiro, Brazil. Aquatic Mammals 26: 65-75.
  • SENNA MCA, COSTA MH, DAVIDSON EA AND NOBRE CA. 2014. Modeling the impact of net primary production dynamics on postdisturbance Amazon savannization. An Acad Bras Cienc 86: 621-632.
  • TABB DL. 2013. Quality assessment for clinical proteomics. Clin Biochem 46: 411-420.
  • VILHENA MB, FRANCO MR, SCHMIDT D, CARVALHO G AND AZEVEDO RA. 2015. Evaluation of protein extraction methods for enhanced proteomic analysis of tomato leave and roots. An Acad Bras Cienc 87: 1853-1863.

Publication Dates

  • Publication in this collection
    Sept 2015
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