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Modeling Root Growth, Crop Growth and N Uptake of Winter Wheat Based on SWMS_2D: Model and Validation

ABSTRACT

Simulations for root growth, crop growth, and N uptake in agro-hydrological models are of significant concern to researchers. SWMS_2D is one of the most widely used physical hydrologically related models. This model solves equations that govern soil-water movement by the finite element method, and has a public access source code. Incorporating key agricultural components into the SWMS_2D model is of practical importance, especially for modeling some critical cereal crops such as winter wheat. We added root growth, crop growth, and N uptake modules into SWMS_2D. The root growth model had two sub-models, one for root penetration and the other for root length distribution. The crop growth model used was adapted from EU-ROTATE_N, linked to the N uptake model. Soil-water limitation, nitrogen limitation, and temperature effects were all considered in dry-weight modeling. Field experiments for winter wheat in Bouwing, the Netherlands, in 1983-1984 were selected for validation. Good agreements were achieved between simulations and measurements, including soil water content at different depths, normalized root length distribution, dry weight and nitrogen uptake. This indicated that the proposed new modules used in the SWMS_2D model are robust and reliable. In the future, more rigorous validation should be carried out, ideally under 2D situations, and attention should be paid to improve some modules, including the module simulating soil N mineralization.

agro-hydrological model; FEM; root length distribution; soil water content

INTRODUCTION

‘SWMS’ is a computer program for simulating water and solute movement in two- or three-dimensional, variably saturated media and is one of the most widely used mechanistic models. The model can simulate, in either two or three dimensions, soil water movement and pollutant transport under transient flow conditions in heterogeneous media using a finite element method (FEM) (Šimůnek et al., 1994Šimůnek J, Vogel T, van Genuchten MTh. The swms_2d code for simulating water flow and solute transport in two-dimensional variably saturated media. Riverside: U.S. Salinity Laboratory Agricultural Research Service, USDA; 1994., 1995Šimůnek J, Vogel T, van Genuchten MTh. The swms_3d code for simulating water flow and solute transport in three-dimensional variably saturated media. Riverside: U.S. Salinity Laboratory Agricultural Research Service, USDA; 1995.; Palla et al., 2009Palla A, Gnecco I, Lanza LG. Unsaturated 2D modelling of subsurface water flow in the coarse-grained porous matrix of a green roof. J Hydrol. 2009;379:193-204. https://doi.org/10.1016/j.jhydrol.2009.10.008
https://doi.org/10.1016/j.jhydrol.2009.1...
). There have been many applications and hydrology-related case studies using this model. This model was applied to simulate the variably saturated flow within a green roof system, in order to characterize the hydrological behavior of the system (Palla et al., 2009Palla A, Gnecco I, Lanza LG. Unsaturated 2D modelling of subsurface water flow in the coarse-grained porous matrix of a green roof. J Hydrol. 2009;379:193-204. https://doi.org/10.1016/j.jhydrol.2009.10.008
https://doi.org/10.1016/j.jhydrol.2009.1...
). It has also been found to be useful inexamining and evaluating other models, such as the WAVE model (El-Sadek, 2009El-Sadek A. Comparison between numerical and analytical solution of solute transport models. J Afr Earth Sci. 2009;55:63-8.). The SWMS_3D version of the model was applied by Dages et al. (2008)Dages C, Voltz M, Ackerer P. Parameterization and evaluation of a three-dimensional modeling approach to water table recharge from seepage losses in a ditch. J Hydrol. 2008;348:350-62. https://doi.org/10.1016/j.jhydrol.2007.10.004
https://doi.org/10.1016/j.jhydrol.2007.1...
to evaluate a three-dimensional Richards’ equation-based modeling approach for simulating groundwater recharge. As the SWMS code is in the public domain and can be used freely, researchers have been adapting, extending, and developing the SWMS model by adding new components, introducing new boundary conditions and others features.

Crop models have been constructed to include transpiration, water and nitrogen limitations, and partitioning of biomass for assimilation between shoots and roots. Soil water content, N uptake, and root and crop growth are the main components for simulations using crop models and on-site measurements, which are of particular concern to both researchers and farmers. Corre-Hellouet al. (2009) used the STICS intercropping model to simulate crop growth and N accumulation in pea-barley intercropping. They found simulation results were in agreement with the observations from the experiment dataset. Improvements in crop growth, soil water, and groundwater modules in SWAT were implemented by Luo et al. (2008)Luo Y, He C, Sophocleous M, Yin Z, Hongrui R, Ouyang Z. Assessment of crop growth and soil water modules in SWAT200 using extensive field experiment data in an irrigation district of Yellow River Basin. J Hydrol. 2008;352:139-56. https://doi.org/10.1016/j.jhydrol.2008.01.003
https://doi.org/10.1016/j.jhydrol.2008.0...
. These modifications improved simulations of crop evapotranspiration and biomass, as well as soil water dynamics, under dry soil profile conditions. An evaluation of the accuracy of the Opus model was made by Wegehenkel and Mirschel (2006)Wegehenkel M, Mirschel W. Crop growth, soil water and nitrogen balance simulation on three experimental field plots using the Opus model-A case study. Ecol Model. 2006;190:116-32. https://doi.org/10.1016/j.ecolmodel.2005.02.020
https://doi.org/10.1016/j.ecolmodel.2005...
regarding the simulation of crop growth, soil water, and N balance dynamics under the site conditions of the northeast German lowlands.

Widely used nutrient response models that cover a range of crops are the EPIC models (Balkovic et al., 2013Balkovic J, Velde M, Schmid E, Skalsky R, Khabarov N, Obersteiner M, Sturmer B, Xiong W. Pan-European crop modelling with EPIC: Implementation, up-scaling and regional crop yield validation. Agric Syst. 2013;120:61-75. https://doi.org/10.1016/j.agsy.2013.05.008
https://doi.org/10.1016/j.agsy.2013.05.0...
) and DSSAT models (Dokoohaki et al., 2016Dokoohaki H, Gheysari M, Mousavi SF, Zand-Parsa S, Miguez FE, Archontoulis SV, Hoogenboom G. Coupling and testing a new soil water module in DSSAT CERES-Maize model for maize production under semi-arid condition. Agric Water Manage. 2016;163:90-9. https://doi.org/10.1016/j.agwat.2015.09.002
https://doi.org/10.1016/j.agwat.2015.09....
). These two models have been used to study the effects of climate and management on growth and yield (Zhang et al., 2009Zhang KF, Yang DJ, Greenwood DJ, Rahn CR, Thorup-Kristensen K. Development and critical evaluation of a generic 2-D agro-hydrological model (SMCR_N) for responses of crop yield and nitrogen composition to nitrogen fertilizer. Agric Ecosyst Environ. 2009;132:160-72. https://doi.org/10.1016/j.agee.2009.03.011
https://doi.org/10.1016/j.agee.2009.03.0...
). However, these models are generally complex and, therefore, the model parameters are not easily obtained. In addition, the 1D nature of the models also means that they cannot be used for wide row crops or ridged crops satisfactorily. The major difference between this study and previous research is that the model proposed here attempts to deal with 2D situations, which are common in the real world. Further, the input parameters of the proposed model are easily available.

The study incorporated crop growth, root growth, and N uptake modules into SWMS_2D. This newly developed model can be used in a wide area of research. SWMS_2D was chosen as the base model for the following reasons: first, the source code of SWMS_2D is free and open to the public, while many other similar models are not. Second, the study attempted to simulate for 2D agro-hydrological cases. And third, SWMS_2D performs particularly well in modeling of soil water movement. There are indeed some other crop N models dealing with similar processes (soil water movement, crop growth, root growth, N uptake, and others), but they are not process based. The main objective of this study was to develop such a model for agro-hydrological simulations for various crops. In farmland simulations, there are wide row crops and ridged crops, which ideally should be considered as 2D cases. The model developed is process based, and thus complex. It involves many of the processes (including soil water movement, root and crop growth, and N uptake) that govern water and N dynamics in the soil-crop system.

Since winter wheat is one of the most important cereal crops globally, research into simulation and monitoring of this crop have been widely conducted. For example, Bechini et al. (2006)Bechini L, Bocchi S, Maggiore T, Confalonieri R. Parameterization of a crop growth and development simulation model at sub-model components level. An example for winter wheat (Triticum aestivum L.). Environ Modell Softw. 2006;21:1042-54. https://doi.org/10.1016/j.envsoft.2005.05.006
https://doi.org/10.1016/j.envsoft.2005.0...
carried out experiments in northern Italy from 1986 to 2001 to quantify the dynamics of aboveground biomass, plant N concentration, and N uptake and used the measurements for testing the CropSyst model. Other similar studies can be found in a large body of literature (Groot and Verberne, 1991Groot JJR, Verberne ELJ. Response of wheat to nitrogen fertilization, a data set to validate simulation models for nitrogen dynamics in crop and soil. Fert Res. 1991;27:349-83. https://doi.org/10.1007/BF01051140
https://doi.org/10.1007/BF01051140...
; Li et al., 2009Li T, Feng Y, Li X. Predicting crop growth under different cropping and fertilizing management practices. Agric Fort Meteorol. 2009;149: 985-98. https://doi.org/10.1016/j.agrformet.2008.12.005
https://doi.org/10.1016/j.agrformet.2008...
; Zhang et al., 2009Zhang KF, Yang DJ, Greenwood DJ, Rahn CR, Thorup-Kristensen K. Development and critical evaluation of a generic 2-D agro-hydrological model (SMCR_N) for responses of crop yield and nitrogen composition to nitrogen fertilizer. Agric Ecosyst Environ. 2009;132:160-72. https://doi.org/10.1016/j.agee.2009.03.011
https://doi.org/10.1016/j.agee.2009.03.0...
; Biernath et al., 2011Biernath C, Gayler S, Bittner S, Klein C, Högy P, Fangmeier A, Priesack E. Evaluating the ability of four crop models to predict different environmental impacts on spring wheat grown in open-top chambers. Eur J Agron. 2011;35:71-82. https://doi.org/10.1016/j.eja.2011.04.001
https://doi.org/10.1016/j.eja.2011.04.00...
).

The objectives of this paper were to develop the SWMS_2D model by adding the root growth model, crop growth model, and nitrogen uptake model; and to validate the newlydeveloped model by comparison between simulation and real measurement.

MATERIALS AND METHODS

Governing equation for soil water movement and root water uptake

The governing equation for soil water movement and root water uptake in the 2-D dimension within the soil profile is expressed in terms of soil water content, θ, the pressure head, h, and root water uptake, S (Šimůnek et al., 1994Šimůnek J, Vogel T, van Genuchten MTh. The swms_2d code for simulating water flow and solute transport in two-dimensional variably saturated media. Riverside: U.S. Salinity Laboratory Agricultural Research Service, USDA; 1994.):

Eq. 1

Eq. 2

Eq. 3

Eq. 4

where θ (m3 m-3) is the volumetric water content, h (m) is the pressure head, S (d-1) is the rootwater uptake rate, xi (I = 1.2) (m) are the spatial coordinates, t (d) is time, KijA are components of a dimensionless anisotropy tensor KA, K (m d-1) is the unsaturated hydraulic conductivity function, h0 (x,z) (m) is the initial soil pressure head in the profile, E (m d-1) is the maximum potential rate of infiltration or evaporation under the current atmospheric conditions, ni are the components of the outward unit vector normal to boundary, and ψ (m) is prescribed functions of x, z, and t. Equations 3 and 4 are the upper and lower boundary conditions, respectively.

Equation 1 is a non-linear differential equation and the finite element method (FEM) based on the source code of SWMS_2D (Šimůnek et al., 1994Šimůnek J, Vogel T, van Genuchten MTh. The swms_2d code for simulating water flow and solute transport in two-dimensional variably saturated media. Riverside: U.S. Salinity Laboratory Agricultural Research Service, USDA; 1994.) is used. Details of SWMS_2D can be seen in Šimůnek et al. (1994)Šimůnek J, Vogel T, van Genuchten MTh. The swms_2d code for simulating water flow and solute transport in two-dimensional variably saturated media. Riverside: U.S. Salinity Laboratory Agricultural Research Service, USDA; 1994..

The soil hydraulic functions are defined according to van Genuchten (1980)van Genuchten MTh. A closed-form equation for predicting the hydraulic conductivity of unsaturated soils. Soil Sci Soc Am J. 1980;44:892-8. https://doi.org/10.2136/sssaj1980.03615995004400050002x
https://doi.org/10.2136/sssaj1980.036159...
and Mualem (1976)Mualem Y. A new model for predicting the hydraulic conductivity of unsaturated porous media. Water Resour Res. 1976;12:513-22. https://doi.org/10.1029/WR012i003p00513
https://doi.org/10.1029/WR012i003p00513...
:

Eq. 5

Eq. 6

where Θ is the relative saturation, θs and θr (m3 m-3) are the saturated and residual soil water contents, respectively, α (m-1) and n are the shape parameters of the retention and conductivity functions, m=1-1/n, and Ks (m d-1)is the saturated hydraulic conductivity.

The rootwater uptake rate S is defined according to Feddes et al. (1978)Feddes RA, Kowalik PJ, Zaradny H. Simulation of field water use and crop yield. Wageningen: Center for Agriculture, Publishing and Documentation; 1978. and Zuo et al.(2004)Zuo Q, Jie F, Zhang R, Meng L. A generalized function of wheat’s root length density distributions. Vadose Zone J. 2004;3:271-7. https://doi.org/10.2113/3.1.271
https://doi.org/10.2113/3.1.271...
:

Eq. 7

Eq. 8

Eq. 9

where Smax (d-1) is the maximal specific water extraction rate under optimal soil water conditions, γ(h) is a dimensionless reduction function simulating water stress, Lr(m) is root penetration depth, Tpot (m d-1) is daily potential transpiration, calculated by the Penman-Monteith method (Tegos et al., 2015Tegos A, Malamos N, Koutsoyiannis D. A parsimonious regional parametric evapotranspiration model based on a simplification of the Penman-Monteith formula. J Hydrol. 2015;523:708-17. https://doi.org/10.1016/j.jhydrol.2015.03.024
https://doi.org/10.1016/j.jhydrol.2015.0...
), Lnrd(zr) is the root length density distribution function, Ld(zr) (m m-3) is root length density at zr depth, zr is normalized z, ranging from 0 to 1 (zr = z/Lr), h1(m) and h4(m)are the soil matric potentials at the anaerobiosis point and wilting point, respectively, h2(m) is the value of the pressure head, below which roots start to extract water at the maximum possible rate, and h3(m) is the value of the limiting pressure head, below which the roots cannot extract water at the maximum rate.

Root growth model

The root growth dynamic model is divided into 2 sub-modules. One is for root penetration calculation, based on the study of Pedersen et al. (2010)Pedersen A, Zhang K, Thorup-Kristensen K, Jensen LS. Modeling diverse root density dynamics and deep nitrogen uptake-A simple approach. Plant Soil. 2010;326:493-510. https://doi.org/10.1007/s11104-009-0028-8.
https://doi.org/10.1007/s11104-009-0028-...
. The other is used to model root length density distribution, based on the study of Wu et al. (1999). Root penetration calculation in the 2-D dimension within the soil profile is according to equations 10-12:

Eq. 10

Eq. 11

Eq. 12

where DD (°C) is cumulative day-degrees, DDlag (°C) is the lag phase for initial root growth, Rz and Rx (m) are vertical and horizontal root penetration depths, respectively, Rz-min and Rx-min (m) are initial root lengths, Rz-max and Rx-max (m) are maximum root lengths, krz and krx (m d-1 °C-1) are vertical and horizontal root growth rates, respectively, Tair (°C) is daily average temperature, and Tmin (°C) and Tmax (°C) are the minimum and maximum temperatures for root growth.

The newlycoupled root penetration model, which is based on DD (°C), has been shown in field trials to be applicable to both monocot and dicot crops (Smit and Groenwold, 2005Smit AL, Groenwold J. Root characteristics of selected field crops: Data from the Wageningen Rhizolab (1990-2002). Plant Soil. 2005;272:365-84. https://doi.org/10.1007/s11104-004-5979-1
https://doi.org/10.1007/s11104-004-5979-...
; Kirkegaard and Lilley, 2007Kirkegaard JA, Lilley JM. Root penetration rate-a benchmark to identify soil and plant limitations to rooting depth in wheat. Aust J Exp Agric. 2007;47:590-602.; Pedersen et al., 2010Pedersen A, Zhang K, Thorup-Kristensen K, Jensen LS. Modeling diverse root density dynamics and deep nitrogen uptake-A simple approach. Plant Soil. 2010;326:493-510. https://doi.org/10.1007/s11104-009-0028-8.
https://doi.org/10.1007/s11104-009-0028-...
). For a 1D case, root penetration can be simplified to equations 10 and 12.

Normalized relative root density distributions at different growth stages are quite similar, so Wu et al. (1999) introduced a third-order polynomial equation to describe Lnrd of winter wheat as follows:

Eq. 13

where Ri (i = 0, 1, 2, 3) are the polynomial coefficients and zr is normalized z, ranging from 0 to 1 (zr = z/Lr).

Crop growth and N uptake model

For crop growth:

Eq. 14

where W (Mg ha-1) is the dry weight per unit area of plant dry matter excluding fibrous roots, K1 (Mg ha-1)is a growth constant which is equal to 1 Mg ha-1 for all crops, K2 is a growth coefficient characterizing crop growth when there is ample mineral N, ample available water, and a comfortable temperature for crop growth, and GN, GT, and GW are growth coefficients (ranging from 0 to 1) dependent on crop % N, DD, and water supply, calculated as described below (Rahn et al., 2007Rahn C, Zhang K, Lillywhite R. Brief description of the EU-ROTATE_N model. Warwick, UK: WHRI, Warwick University; 2007.). Equation 14 is the crop growth model developed by Greenwood (2001)Greenwood DJ. Modeling N-response of field vegetable crops grown under diverse conditions with N-able: a review. J Plant Nutr. 2001;24:1799-815. https://doi.org/10.1081/PLN-100107313
https://doi.org/10.1081/PLN-100107313...
, which is adopted in the EU-ROTATE_N model (Rahn et al., 2007Rahn C, Zhang K, Lillywhite R. Brief description of the EU-ROTATE_N model. Warwick, UK: WHRI, Warwick University; 2007.).

GN, GT, and GW are calculated in the following equation, respectively:

Eq. 15

Eq. 16

Eq. 17

where %N is the actual %N in the dry matter of the whole plant (excluding fibrous roots), %Ncrit is the critical %N, Tact and Tpot (m d-1) are the daily actual and potential transpiration rate, and Tmax and Tmin (°C) are the maximum and minimum temperature for crop growth. For equation 17, we revised GT to 0.3 instead of 0.0 when Tair is less than Tmin.

Eq. 18

Eq. 19

Eq. 20

where Ng is %N of the growth related tissue and Ns is %N of the storage tissue, a and b are two parameters for critical N calculation, and ∆N (kg ha-1) is the one-day N increment of the crop. Equation 19 is used for calculating N uptake between t and t+∆t, and ∆t is daily in this model.

For N transformation in soil, a simple approach was adopted, based on the study of Greenwood (2001)Greenwood DJ. Modeling N-response of field vegetable crops grown under diverse conditions with N-able: a review. J Plant Nutr. 2001;24:1799-815. https://doi.org/10.1081/PLN-100107313
https://doi.org/10.1081/PLN-100107313...
and Rahn et al. (2007)Rahn C, Zhang K, Lillywhite R. Brief description of the EU-ROTATE_N model. Warwick, UK: WHRI, Warwick University; 2007.. This is partly because the simple method adopted in our study was based on experiments on agricultural soils, and this approach has successfully been used for many such situations.

Evaluation criteria

The performance of the model was evaluated using the following statistical indices (Nash and Sutcliffe, 1970Nash JE, Sutcliffe JV. River flow forecasting through conceptual models. Part I - A discussion of principles. J Hydrol. 1970;10:282-90.; Willmot, 1981Willmot CJ. On the validation of models. Phys Geogr. 1981;2:184-94.): the Nash-Sutcliffe coefficient of model efficiency (ENS), the coefficient of determination (R2), the index of agreement (D), the root of the mean squared errors (RMSE), and the mean error (ME).

Eq. 21

Eq. 22

Eq. 23

Eq. 24

Eq. 25

where yi and yi are the measured value and predicted value, yi-a and yi-a are the average value of the measured value yi and predicted value yi, and N is the number of measurements.

Validation case

During the 1982-1983 and 1983-1984 growing seasons, field experiments with winter wheat were conducted in Bouwing, the Netherlands. These experiments were to obtain data on crop growth and development, nitrogen uptake, soil nitrogen dynamics, and soil water dynamics under different nitrogen treatments at three sites (Bouwing, Eest, and PAGV) under natural weather conditions (Groot and Verberne, 1991Groot JJR, Verberne ELJ. Response of wheat to nitrogen fertilization, a data set to validate simulation models for nitrogen dynamics in crop and soil. Fert Res. 1991;27:349-83. https://doi.org/10.1007/BF01051140
https://doi.org/10.1007/BF01051140...
; Yang et al., 2009Yang DJ, Zhang TQ, Zhang KF, Greenwood DJ, Hammond JP, White PJ. An easily implemented ago-hydrological procedure with dynamic root simulation for water transfer in the crop-soil system: validation and application. J Hydrol. 2009;370:177-90. https://doi.org/10.1016/j.jhydrol.2009.03.005
https://doi.org/10.1016/j.jhydrol.2009.0...
). The data from the Bouwing experiment, undertaken during 1983 to 1984, was chosen for the current study. A summary of the experiment is given in table 1. The atmospheric data (rainfall, and minimum and maximum temperature) for the Bouwing experiment during 1983 to 1984 are presented in figure 1. There was no irrigation and only one fertilizer treatment in this case. Other details of the experiments can be seen in Groot and Verberne (1991)Groot JJR, Verberne ELJ. Response of wheat to nitrogen fertilization, a data set to validate simulation models for nitrogen dynamics in crop and soil. Fert Res. 1991;27:349-83. https://doi.org/10.1007/BF01051140
https://doi.org/10.1007/BF01051140...
.

Table 1
Summary of the Bouwing experiment

Figure 1
Atmospheric data (rainfall, the minimum and maximum temperature) for Bouwing experiment during 1983 to 1984.

Model parameterization

The model parameterization includes data for weather, soil, crop and others factors. The study used the measured values of soil water content and mineral N down the soil profile and the crop dry weight on Feb 14, 1984, as the initial condition (Table 2). Weather conditions, including rainfall and daily maximum and minimum temperature, were obtained from the closest meteorological station at Wageningen, which is 7 km away from the experimental farm at Bouwing (Groot and Verberne, 1991Groot JJR, Verberne ELJ. Response of wheat to nitrogen fertilization, a data set to validate simulation models for nitrogen dynamics in crop and soil. Fert Res. 1991;27:349-83. https://doi.org/10.1007/BF01051140
https://doi.org/10.1007/BF01051140...
). The fitted values of parameters are from Yang et al. (2009)Yang DJ, Zhang TQ, Zhang KF, Greenwood DJ, Hammond JP, White PJ. An easily implemented ago-hydrological procedure with dynamic root simulation for water transfer in the crop-soil system: validation and application. J Hydrol. 2009;370:177-90. https://doi.org/10.1016/j.jhydrol.2009.03.005
https://doi.org/10.1016/j.jhydrol.2009.0...
, shown in table 3. These values were obtained by applying RETC software (van Genuchten et al., 1991van Genuchten MTh, Leij FJ, Yates SR. The RETC code for quantifying the hydraulic functions of unsaturated soils. Washington, DC: United States Environmental Protection Agency; 1991.) to estimate soil water retention and conductivity curves for the 0.00-0.40 and 0.40-1,00 m layers on the experimental farm.

Table 2
Initial values of soil water content (θ) and mineral nitrogen

Table 3
Fitted van Genuchten parameter values for the Bouwing experiments using the RETC software (van Genuchten et al., 1991van Genuchten MTh, Leij FJ, Yates SR. The RETC code for quantifying the hydraulic functions of unsaturated soils. Washington, DC: United States Environmental Protection Agency; 1991., Yang et al., 2009Yang DJ, Zhang TQ, Zhang KF, Greenwood DJ, Hammond JP, White PJ. An easily implemented ago-hydrological procedure with dynamic root simulation for water transfer in the crop-soil system: validation and application. J Hydrol. 2009;370:177-90. https://doi.org/10.1016/j.jhydrol.2009.03.005
https://doi.org/10.1016/j.jhydrol.2009.0...
)

Values of R0, R1, R2, and R3 are obtained from the study of Wu et al. (1999). From that study, it can be concluded that normalized relative root density distributions at different growth stages are quite similar when equation 13 is used. Rz-min is set as rooting depth at sowing or planting, and Rz-max is rooting depth at harvest. Rz-min is 0.10 m according to Pedersen et al. (2010)Pedersen A, Zhang K, Thorup-Kristensen K, Jensen LS. Modeling diverse root density dynamics and deep nitrogen uptake-A simple approach. Plant Soil. 2010;326:493-510. https://doi.org/10.1007/s11104-009-0028-8.
https://doi.org/10.1007/s11104-009-0028-...
, and Rz-max is 1,00 m from the experiment data (Groot and Verberne, 1991Groot JJR, Verberne ELJ. Response of wheat to nitrogen fertilization, a data set to validate simulation models for nitrogen dynamics in crop and soil. Fert Res. 1991;27:349-83. https://doi.org/10.1007/BF01051140
https://doi.org/10.1007/BF01051140...
). The other four parameters, DDlag, Krz, Tmin, and Tmax, were obtained and evaluated from Pedersen et al. (2010)Pedersen A, Zhang K, Thorup-Kristensen K, Jensen LS. Modeling diverse root density dynamics and deep nitrogen uptake-A simple approach. Plant Soil. 2010;326:493-510. https://doi.org/10.1007/s11104-009-0028-8.
https://doi.org/10.1007/s11104-009-0028-...
, as there are too few parameter studies for winter wheat in this area.

Parameters concerning the root growth dynamics model were set as follows: DDlag = 0 °C, Krz = 0.0069 m d-1 °C-1, Tmin = 5 °C, Tmax = 30 °C, Rz-min = 0.10 m, Rz-max = 1,00 m, R0 = 2.21, R1 = -3.72, R2 = 3.46, and R3 = -1.87.

As for the crop growth model, equation 14 was used differently from the study of Greenwood and Draycott (1989)Greenwood DJ, Draycott A. Experimental validation of an N-response model for widely different crops. Fert Res. 1989;18:153-74. https://doi.org/10.1007/BF01049511
https://doi.org/10.1007/BF01049511...
. Here we divided crop growth into two growth phases. In phase 1, K2 = 0.3 d-1 and in phase 2, K2 = 0.55 d-1. K1 was set at 1 Mg ha-1 during the whole growing season and initial dry weight was 0.033 Mg ha-1. Ns and Ng were 1 and 5.5 % respectively for N uptake modeling, while a and b were 1.35 and 3.0 for calculating critical %N. Tmax and Tmin were set to 20 °C and 4 °C in equation 17 according to Rahn et al. (2007)Rahn C, Zhang K, Lillywhite R. Brief description of the EU-ROTATE_N model. Warwick, UK: WHRI, Warwick University; 2007.. If mean temperature is greater than Tmax, GT is 1.0, indicating that the crop grows very well with no temperature restriction, while if average temperature is less than Tmin, the crop grows slowly and GT = 0.3 is set.

Mineralization rate is influenced by many factors, but as there were not many mineralization conditions to consider in this study, the mineralization rate was setat an average rate of 0.6 kg ha-1 d-1.

The soil domain was calculated to a depth of 1,10 m, and the top and lower boundary condition of water considered as variable flux and free drainage, respectively. The spatial discretization of the 0.012 m depth of the upper and lower boundaries is 0.04 m, while the other layer within the soil profile is from 0.01 to 0.04 m.

RESULTS AND DISCUSSIONS

Soil water contents in different layers

The measured and simulated soil water contents according to time in various layers in this study are in figure 2. Generally speaking, good agreement was achieved between measurement and simulation. In the top 0.00-0.20 m layer, both the simulated curve and the measurement fluctuated from day to day, and changed frequently. This indicated that the upper layer was influenced more acutely than the other five layers by boundary conditions (infiltration and evaporation). For the 0.20-0.30 and 0.30-0.40 m layers, both measured and simulated soil water content decreased until a peak occurred in the 140th to 180th day period. This was because of heavy and intense rainfall events during this period. The simulated curve well fits the measurement for the other three layers from 0.40-1,00 m. Both the measured and simulated soil water content changed steadily and decreased slowly day to day, even when heavy and intense rainfall occurred. One possible reason was that water uptake of roots in these layers increased as root penetration and root length density increased. It should be noted that the layers from 0.00-0.40 m are more easily influenced by upper boundary conditions than those from 0.40-1,00 m.

Figure 2
Comparison between the measured and simulated soil water contents in different layers (The dashed line stands for rainfall).

Evaluation of model performance was carried out for soil water content (Figure 3 and Table 4). Although the coefficient of determination R2 and ENS are only 0.49 and 0.016 respectively, the fitted curve ŷ = 0.005 + 0.9753 x is very close to y = x. The values of D, RMSE, and ME are 0.81, 0.034, and 0.00013 m3 m-3 respectively, indicating that the simulated results are acceptable. The overall comparison between measurement and simulation of soil water content are not very satisfactory. This is mainly because two different layers were simulated in this study.

Figure 4
Comparison of normalized root length distribution between measurement and simulation.

Table 4
Statistical index values of performance of the model

Depth of root penetration and normalized relative root density distribution

A comparison between measurement and simulation for normalized root length density distribution is shown in figures 4 and 5. zr is normalized z, ranging from 0 to 1 (zr = z/Rz), while Lnrd means normalized root length distribution, which can be transformed by equation 9. Simulation results of Lnrd were obtained by coding the root dynamic model (Equations 10, 12, and 13) into SWMS_2D. On April 25, 1984, good agreement was achieved between simulation and measurement. Although good agreements were still obtained between simulation and measurement down through the 0.20-1,00 m soil profile, the simulated values varied from the measured values in the 0.00-0.20 m layer during the latter two phases. Underestimated root length density distribution led to a lower water root uptake value for simulation; thus, soil water content in the 0.00-0.20 m layer was overestimated in simulation during the latter period (Figure 2). This can also be seen in figure 5, and there are two points located far from the 1:1 line. As a result, more attention should be paid to reconsider the Wu et al. (1999)normalized relative root density distribution function in upper soil layers in future research. Statistical index values of model performance are shown in table 4, which indicated that the model performs well in simulating normalized root length density distribution. Roots penetrated to 0.50, 0.90, and 1,00 m depths for three phases, while 0.527, 0.865, and 1,00 m were simulated in this study.

Figure 3
Overall comparison of soil water content between measurement and simulation.

Figure 5
Overall comparison of normalized root length density distribution between measurement and simulation.

Dry weight growth simulation

Comparison between measurement and simulation of dry weight over time for this study can be seen in figure 6. Equations 14-20 were used for simulation and two strategies different from the study of Greenwood and Draycott (1989)Greenwood DJ, Draycott A. Experimental validation of an N-response model for widely different crops. Fert Res. 1989;18:153-74. https://doi.org/10.1007/BF01049511
https://doi.org/10.1007/BF01049511...
were used. One was that K2 was 0.3 t-1 before the 144th day and 0.55 t-1 afterwards, indicating that the growing season was divided into two phases and each phase had a different potential dry weight growing rate. The second was that growth coefficients include GN, GT, and GW, which were recorded in the manual of the EU-ROTATE_N model (Rahn et al., 2007Rahn C, Zhang K, Lillywhite R. Brief description of the EU-ROTATE_N model. Warwick, UK: WHRI, Warwick University; 2007.) and differed from the study of Greenwood and Draycott (1989)Greenwood DJ, Draycott A. Experimental validation of an N-response model for widely different crops. Fert Res. 1989;18:153-74. https://doi.org/10.1007/BF01049511
https://doi.org/10.1007/BF01049511...
.

Figure 6
Comparison of dry weight with time between measurement and simulation.

Different gradients were found for simulated dry weight growth rate, which was induced by a different value for K2 in two growing periods. From the measurement, we found the same phenomenon, and the modeling curve fit well. At harvest, dry weight was 15,162 Mg ha-1 for the field experiment and 15,300 Mg ha-1 for simulation. However, dry weight is overestimated before the 144th day, and underestimated afterwards. High values for the coefficient of determination of 0.97 and an ENS of 0.96 were obtained. This, together with the gradient of the fitted line close to 1, indicates that the model performed well in dry weight simulation (Figure 7).

Figure 7
Overall comparison of dry weight between measurement and simulation.

The variation in the GW, GT, and GN growing coefficients with time, for this study, can be seen in figure 8. Generally, GW changed together with variationin rainfall. It declined from 1.0 to 0.36 from the 44th day to the 85th day because there was insufficient rainfall, and soil water content in the soil domain decreased (Figure 2). However, GW was above 0.8 from the 88th day to the 104th day and from the 148th day to the 170thday period, as heavy and intense rainfall events occurred in both these periods. After about the 170th day, GW declined with time, although there were still rainfall events during this period. The reason for these results was that crop potential transpiration increased as crop dry weight grew, thus the net water in the soil domain decreased every day.

Figure 8
Variety of growing coefficient GW, GT and GN with time.

GT increased with rising average temperature as of day 44, although fluctuations were found throughout the whole growing season. In the beginning, GT was as low as the minimum value 0.3, and increased to as high as 1.0 at intervals in the end.

GN ranged from 0.65 to 1.0, with an average value as high as 0.82, indicating that growth rate was not greatly influenced by N. As crop dry weight increased, %N and %Ncrit of the crop decreased at different rates. From the 44th day to the 151st day, %N decreased more rapidly, which led GN to decrease from 1.0 to 0.65. After the 151st day, GN increased with time, and reached 0.89 at harvest. The inflexion of GN for time was on the 151st day, very near the 144th day, when K2 changed from 0.3 to 0.55.

The comparison between measurement and simulation of cumulative N uptake by the plant over time is in figure 9. Before the 124th day, the simulated cumulative N uptake by plants was overestimated, compared with the experiment data, while after the 124th day, it was underestimated. This was mainly caused by the simulation results of dry weight (Figure 6). Simulation results were divided into two phases by the 144th day, and the different N uptake rate, seen from figure 9, is due to a different dry matter growing rate. Better agreements were achieved in the latter period of the growing season, compared with simulation for the beginning. At harvest, 194.36 kg ha-1 was simulated for cumulative N uptake by the plant, very close to the 194.70 kg ha-1 of the experiment data. The overall comparison between measurement and simulation of cumulative N uptake (Figure 10 and Table 4) also shows very high R2 and ENS, and the best fit line is very close to the 1:1 line.

Figure 9
Comparison of cumulative nitrogen uptake by plant with time between measurement and simulation.

Figure 10
Overall comparison of cumulative nitrogen uptake between measurement and simulation.

Indices of how good the fit for this model is can be seen in table 4. Apart from soil water content, the other simulated values are very acceptable, with a very high Ens and R2. For soil water content, the Ens and R2 values are relative low, partly due to the fact that the soil water content measured was not markedly variable. This phenomenon, that the simulated soil water content is associated with low R2 and Ens values, can be seen elsewhere (Kröbel et al., 2010Kröbel R, Sun Q, Ingwersen J, Chen X, Zhang F, Müller T, Römheld V. Modeling water dynamics with DNDC and DAISY in a soil of the North China Plain: A comparative study. Environ Modell Softw. 2010;25:583-601.; Nendel et al., 2012Nendel C, Venezia A, Piro F, Ren T, Lillywhite RD, Rahn CR. The performance of the EU-Rotate_N model in predicting the growth and nitrogen uptake of rotations of field vegetable crops in a Mediterranean environment. J Agric Sci. 2012;151:1-18. https://doi.org/10.1017/S0021859612000688
https://doi.org/10.1017/S002185961200068...
).

Compared with other crop nutrient models, such as STICS (Corre-Hellou et al., 2009Corre-Hellou G, Faure M, Launay M, Brisson N, Crozat Y. Adaptation of the STICS intercrop model to simulate crop growth and N accumulation in pea-barley intercrops. Field Crop Res. 2009;113:72-81. https://doi.org/10.1016/j.fcr.2009.04.007
https://doi.org/10.1016/j.fcr.2009.04.00...
), EPIC (Balkovicet al., 2013Balkovic J, Velde M, Schmid E, Skalsky R, Khabarov N, Obersteiner M, Sturmer B, Xiong W. Pan-European crop modelling with EPIC: Implementation, up-scaling and regional crop yield validation. Agric Syst. 2013;120:61-75. https://doi.org/10.1016/j.agsy.2013.05.008
https://doi.org/10.1016/j.agsy.2013.05.0...
), and DSSAT (Dokoohakiet al., 2016Dokoohaki H, Gheysari M, Mousavi SF, Zand-Parsa S, Miguez FE, Archontoulis SV, Hoogenboom G. Coupling and testing a new soil water module in DSSAT CERES-Maize model for maize production under semi-arid condition. Agric Water Manage. 2016;163:90-9. https://doi.org/10.1016/j.agwat.2015.09.002
https://doi.org/10.1016/j.agwat.2015.09....
), this newly developed model using SWMS_2D as the core is 2D, which makes it more widely applicable. In addition, as the model uses relatively easily available data, it has the potential for use across a much wider field. While the model requires improvement in some areas, such as the simulation of soil N transformation, future studies will include further validation of the model, as well as strengthening of those weak modules.

CONCLUSIONS

The newly developed SWMS_2D is reliable for agro-hydrological simulation, especially for root growth, dry weight growth, and nitrogen uptake by the plant. Important points of the study are considerations of soil water limitation, nitrogen limitation, and temperature influence for dry weight growth modeling, which are now calculated by simple but reliable methods.

The study is the first step in validating the proposed 2D model, but more rigorous validation should be carried out, ideally under 2D situations. Attention should also be paid to improving some modules, including the module simulating soil N mineralization.

ACKNOWLEDGMENTS

The authors gratefully thank Dr. J. Neeteson for kindly providing the essential dataset for validating the model proposed in the study, and Dr. J. Šimůnek for providing the SWMS_2D source code. The work was supported by “the Fundamental Research Funds for the Central Universities” (No. 2017XKQY072).

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Publication Dates

  • Publication in this collection
    2017

History

  • Received
    30 Apr 2015
  • Accepted
    28 Oct 2015
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