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Galium spurium and G. aparine Resistance to ALS-Inhibiting Herbicides in Northern Greece

Resistência de Galium spurium e G. aparine a Herbicidas Inibidores da ALS no Norte da Grécia

ABSTRACT:

Knowledge of the level of resistance of weed populations and the herbicides to which they survive is important for recommending suitable advice to farmers and allowing the selection of appropriate management strategies. Whole-plant dose response experiments were carried out to assess the resistance status of eight putative resistant Galium spurium L. populations and one G. aparine L. population, originating from northern Greece. High levels of resistance of both species to the ALS-inhibiting herbicides chlorsulfuron and tribenuron were found, while their susceptible populations were controlled. Three G. spurium (GS) populations showed additional cross-resistance to [florasulam + 2,4-D], whereas the remaining five resistant GS populations were controlled with [tribenuron + mecoprop-p], [florasulam + 2,4-D], and [florasulam + aminopyralid]. Also, [florasulam + fluroxypyr] was very effective against two resistant GS populations tested. DNA sequence alignment of the three GS populations (GS 1, GS 6, and GS 8) with cross-resistance to chlorsulfuron, tribenuron, and florasulam revealed a point mutation at Trp-574 (tryptophan-574), causing amino acid substitution by Leu (leucine). The G. aparine (GA) population showed cross-resistance to chlorsulfuron and tribenuron, but it was controlled with [tribenuron + mecoprop-p], [florasulam + aminopyralid], [florasulam + 2,4-D], and [florasulam + fluroxypyr]. The confirmed cross-resistance of both GS and GA species to chlorsulfuron and tribenuron in northern Greece is the first report of Galium spp. resistance to ALS-inhibiting herbicides in Europe. Finally, all populations (8 GS and 1 GA) that showed resistance to chlorsulfuron and tribenuron were controlled with the mixtures [tribenuron + mecoprop-p] and [florasulam + fluroxypyr].

Keywords:
ALS gene sequencing; cross-resistance; target-site mutation

RESUMO:

O conhecimento do nível de resistência das populações de plantas daninhas e dos herbicidas aos quais eles sobrevivem é importante para recomendar conselhos adequados aos agricultores e permitir a seleção de estratégias de gestão apropriadas. Experimentos de resposta de plantas inteiras foram realizados para estudar os níveis de resistência de oito populações supostamente resistentes de Galium spurium L. e uma população de G. aparine L., originários do norte da Grécia. Altos níveis de resistência de ambas as espécies aos herbicidas inibidores de ALS clorsulfuron e tribenuron foram encontrados, enquanto suas populações suscetíveis foram controladas. Três populações de G. spurium (GS) mostraram resistência cruzada adicional a [florasulam + 2,4-D], enquanto as cinco populações restantes de GS resistentes foram totalmente controladas com [tribenuron + mecoprop-p], [florasulam + 2,4-D] e [florasulam + aminopyralid]. Além disso, o tratamento com [florasulam + fluroxypyr] foi muito eficaz contra duas populações GS resistentes testadas. A sequência de DNA das três populações GS com resistência cruzada a clorsulfuron, tribenuron e florasulam revelou uma mutação pontual na posição Trp-574 (triptofano-574), causando a substituição de aminoácidos por Leu (leucina). A suposta população de G. aparine (GA) apresentou resistência cruzada a clorsulfuron e a tribenuron, mas foi controlada com [tribenuron + mecoprop-p], [florasulam + aminopyralid], [florasulam + 2,4-D] e [florasulam + fluroxypyr]. A resistência cruzada confirmada das espécies GS e GA ao clorsulfuron e tribenuron no norte da Grécia é o primeiro relato de resistência de Galium spp. a herbicidas inibidores da ALS na Europa. Finalmente, todas as populações (8 GS and 1 GA) que apresentaram resistência foram controladas com as misturas [tribenuron + mecoprop-p] e [florasulam + fluroxypyr].

Palavras-chave:
sequenciamento do gene ALS; resistência cruzada; mutação no sítio-alvo

INTRODUCTION

Galium spp., such as G. spurium and G. aparine, are annual broadleaf weeds with reproduction by seed (Malik et al., 1988Malik N, Vanden Born WH. The biology of Canadian weeds. 86. Galium aparine L. and Galium spurium L. Can J Plant Sci. 1988;68:481-99.). Both species are native to Eurasia, whereas G. aparine is also native to North America (Malik et al., 1988; Defelice, 2002Defelice MS. Catchweed bedstraw or cleavers, Galium aparine L. - A very ‘sticky’ subject. Weed Technol. 2002;16:467-72.). Galium aparine occurs in temperate zones and in high altitudes in the tropics (Holm et al., 1978Holm LG, Plucknett DL, Pancho JV, Herberger JP. The world’s worst weeds: Distribution and biology. Honolulu: University of Hawaii Press; 1978. 609p.), whereas G. spurium is widely distributed in Europe (Hanf, 1983Hanf M. The arable weeds of Europe. BASF; 1983. 494p.). G. aparine is found in arable fields and native habitats, waste ground, fence rows, barnyards, and pastures (Moore, 1975Moore RJ. The Galium aparine complex in Canada. Can J Bot. 1975;53:877-93.). This weed can grow in various soil types, but it is mostly found in nutrient-rich, deep, loamy and clayey soils, containing humus, and moist habitats (Holm et al., 1978). On the other hand, G. spurium prefers dry and sunny habitats and does not tolerate shade (Malik et al., 1988).

Galium spp. are among the most common and important annual broadleaf weeds in winter cereals (mainly wheat) grown throughout the world and in Greece (Malik et al., 1988Malik N, Vanden Born WH. The biology of Canadian weeds. 86. Galium aparine L. and Galium spurium L. Can J Plant Sci. 1988;68:481-99.). The three Galium spp., which commonly occur in Greece, are G. spurium L., G. aparine L., and G. tricornutum Dandy. G. spurium is the predominant Galium species, infesting winter cereals in Greece (Giannopolitis, 1982Giannopolitis K. Galium weed species in wheat fields of Greece: spread, severity and effect on yield. Zizaniology 1982;5-10.), along with corn poppy (Papaver rhoeas L.) and wild mustard (Sinapis arvensis L.). Galium spp. share similar morphological characteristics, which makes them difficult to distinguish, particularly at the vegetative stage (Malik et al., 1988). Galium spp. are very competitive with wheat causing high yield losses, especially as N inputs increases (Baylis and Watkinson, 1991Baylis JM, Watkinson AR. The effect of reduced nitrogen fertilizer inputs on the competitive effect of cleavers (Galium aparine) on wheat (Triticum aestivum). In: Proceedings of Brighton Crop Protection Conference, Weeds. Conference paper. Wallingford: CAB International; 1991. v.1. p.129-34.). The Galium plants compete effectively with and cause substantial losses (30-60%) in cereal crops, as they grow over the top of cereal canopies, causing lodging, delaying harvest, resulting in serious interference with mechanical harvesting operations, and reducing marketable yield by 30-60% (Froud-Williams, 1985Froud-Williams RJ. The biology of cleavers (Galium aparine). Asp Appl Biol. 1985;9:189-95.).

Several acetolactate synthase (ALS) inhibitors (mainly chlorsulfuron, tribenuron, and florasulam) have been widely used to control Galium spp. in cereals for the past 20 years. Moreover, formulated mixtures of ALS-inhibiting herbicides with auxin-type herbicides (e.g., [tribenuron + mecoprop-p], [florasulam + 2,4-D], [florasulam + aminopyralid], [florasulam + fluroxypyr], [florasulam + dicamba]) are currently used to manage populations of serious common weed species (corn poppy, wild mustard) infesting winter cereals (mostly wheat) grown in Greece that display reduced levels of control with the use of ALS-inhibiting herbicides (Kaloumenos et al., 2009Kaloumenos NS, Dordas CA, Diamantidis GC, Eleftherohorinos IG. Multiple Pro197 substitutions in the acetolactate synthase of corn poppy (Papaver rhoeas) confer resistance to tribenuron. Weed Sci. 2009;57:362-8., 2011; Ntoanidou et al., 2017Ntoanidou S, Madesis P, Diamantidis G, Eleftherohorinos I. Trp574 substitution in the acetolactate synthase of Sinapis arvensis confers cross-resistance to tribenuron and imazamox. Pestic Biochem Physiol. 2017;142:9-14.).

ALS (EC 2.2.1.6) is a key enzyme in the biosynthesis of the essentials branched-chain amino acids valine, leucine, and isoleucine (Duggleby and Pang, 2000Duggleby RG, Pang SS. Acetohydroxyacid synthase. Biochem Molec Biol. 2000;33:1-36.). This enzyme is the target site of herbicides belonging to five distinct chemical families: sulfonylureas, imidazolinones, triazolopyrimidines, pyrimidinyl-benzoates (thio- and oxy-benzoates), and sulfonyl-aminocarbonyl-triazolinones (Yu et al., 2010Yu Q, Han H, Vila-Aiub MM, Powles SB. AHAS herbicide resistance endowing mutations: effect on AHAS functionality and plant growth. J Exp Bot. 2010;61:3925-34.). Sensitive plants show various injury symptoms by the ALS-inhibiting herbicides (reduction of plant growth, shortening of internodes, purplish foliage, and shortening of lateral roots), resulting in plant death, caused by deficiency in branched-chain amino acids or by production and build-up of toxic compounds like α-amino-butyrate and α-ketobutyrate (Van Eerd et al., 2004Van Eerd LL, McLean MD, Stephenson GR, Hall JC. Resistance to quinclorac and ALS-inhibitor herbicides in Galium spurium is conferred by two distinct genes. Weed Res. 2004;44:355-65.).

ALS-inhibiting herbicides are used in all major agronomic crops and have been widely adopted due to their low dose rate and high efficacy against a broad spectrum of weeds, relatively low mammalian toxicity, mild toxicological profile, and excellent crop selectivity (Whitcomb, 1999Whitcomb CE. An introduction to ALS-inhibiting herbicides. Toxicol Indus Health 1999;15:232-40.). However, the widespread use of ALS-inhibiting herbicides led to rapid selection of many resistant weed populations. ALS-resistant weeds represent the fastest-growing group of herbicide-resistant weeds worldwide, with 159 monocot and dicot related weeds (Heap, 2018Heap I. International Survey of Herbicide Resistant Weeds. 2018. Available online at: http://www.weedscience.org.
http://www.weedscience.org...
). Herbicides with this specific site of action can select resistant weed biotypes when the initial weed population is treated with lesser than ten applications (Beckie and Tardif, 2012Beckie HJ, Tardif FJ. Herbicide cross resistance in weeds. Crop Protec. 2012;35:15-28.). The herbicide resistance follows two groups: the target-site resistance mechanisms and the non-target site resistance mechanisms. The target-site mechanisms of resistance are due to mutations encounter in the gene that encodes a target enzyme (Yu and Powles, 2014aYu Q, Powles SB. Resistance to AHAS inhibitor herbicides: current understanding. Pest Manage Sci. 2014a;70:1340-50.), while the non-target site mechanisms occur by reduced absorption and translocation or by enhanced metabolism of the herbicide through cytochrome P450 monoxygenases (Yu and Powles, 2014bYu Q, Powles SB. Metabolism-based herbicide resistance and cross-resistance in crop weeds: A threat to herbicide sustainability and global crop production. Plant Physiol. 2014b;166:1106-18.). Non-target site mechanisms can entail resistance to ALS-inhibitors along with other herbicides with diverse modes of action. Field-selected resistance in most weed species is conferred by a modified ALS coding gene, resulting from a single nucleotide change or point mutation, which renders the enzyme insensitive to the herbicide (Tranel and Wright, 2002Tranel PJ, Wright TR. Resistance of weeds to ALS-inhibiting herbicides: what have we learned? Weed Sci. 2002;50:700-12.). So far, 26 resistance-endowing amino acid substitutions have been identified at eight sites across the ALS enzyme (Yu and Powles, 2014bYu Q, Powles SB. Metabolism-based herbicide resistance and cross-resistance in crop weeds: A threat to herbicide sustainability and global crop production. Plant Physiol. 2014b;166:1106-18.). The most frequently identified amino acid substitutions are at Pro-197 and Trp-574-Leu (Yu and Powles, 2014a).

Published research on Galium spp. resistance is limited. In Canada, high levels of resistance to ALS inhibitors triasulfuron, thifensulfuron plus tribenuron, and sulfometuron, whereas moderate levels of resistance to imazethapyr with simultaneous resistance to the auxin herbicide quinclorac have been reported in a biotype of G. spurium (Hall et al., 1998Hall LM, Stromme KM, Horsman GP, Devine MD. Resistance to acetolactate synthase inhibitors and quinclorac in a biotype of false cleavers (Galium spurium). Weed Sci. 1998;46:390-6.; Van Eerd, 2004Van Eerd LL, McLean MD, Stephenson GR, Hall JC. Resistance to quinclorac and ALS-inhibitor herbicides in Galium spurium is conferred by two distinct genes. Weed Res. 2004;44:355-65.; Van Eerd et al., 2005Van Eerd LL, Stephenson GR, Kwiatkowski J, Grossmann K, Hall JC. Physiological and biochemical characterization of quinclorac resistance in a false cleavers (Galium spurium L.) biotype. J Agric Food Chem. 2005;53:1144-51.; Beckie and Tardif, 2012Beckie HJ, Warwick SI, Sauder CA, Kelln GM. Acetolactate synthase inhibitor-resistant false cleavers (Galium spurium) in Western Canada. Weed Technol. 2012;26:151-5.). A G. aparine population resistant to tribenuron-methyl has been reported in winter wheat fields of China (Sun et al., 2011Sun J, Wang J-X, Zhang H-J, Liu J-l, Bian S-N. Study on mutations in ALS for resistance to tribenuron-methyl in Galium aparine L. Agric Sci China 2011;10:86-91.). Reports of Galiumspp. resistance to other ALS-inhibitors and the auxin herbicide fluroxypyr also exist in Canada (Heap, 2018Heap I. International Survey of Herbicide Resistant Weeds. 2018. Available online at: http://www.weedscience.org.
http://www.weedscience.org...
). There are no confirmed cases of Galium spp. resistance in Europe. However, numerous growers of winter cereals in central and northwestern Greece expressed severe concerns of unsatisfactory control of G. spurium and G. aparine populations with the use of chlorsulfuron and other ALS-inhibiting herbicides. Knowledge of the level of resistance of weed populations and the herbicides to which they are resistant is important for offering adequate advice to farmers and allowing the selection of suitable management strategies.

The aim of this research was to examine whether: 1) the poor control of G. spurium and G. aparine in northern Greece can account for development of cross-resistance to ALS-inhibiting herbicides, 2) to clarify the genetic basis of resistance by sequencing the als gene, and 3) to determine the effectiveness of mixtures of ALS-inhibitors with auxin-type herbicides as alternatives for control of the studied populations, bearing different herbicide resistance traits due to various histories of exposure to ALS-inhibiting herbicides.

MATERIALS AND METHODS

Seed source

Three roadside surveys (namely, members of the research team traveling through specified study areas) were carried out during early summer of 2014, 2015, and 2016, respectively, in wheat monoculture fields of northern Greece (counties of Pieria, Serres, Kozani, and Florina), where failure of Galium spp. control with chlorsulfuron and other ALS-inhibiting herbicides had been reported. These surveys aimed at locating and marking fields with poor G. spurium and G. aparine control. Before wheat harvest, mature seeds of Galium spp. were collected from representative fields that had been marked during the roadside surveys. The specific sites located for this study were: Kitros (Pieria) 40.3724 N, 22.5779 E, Kolindros (Pieria) 40.4702 N, 22.4846 E, Melinikitsi (Serres) 41.1470 N, 234429 E, Trigoniko (Kozani) 40.1108 N, 21.9323 E, Frourio (Kozani) 40.063 N, 21.8089 E, and Tripotamos (Florina) 40.8242 N, 21.5009 E. Seeds were collected manually from individual plants of each field and pooled together (characterized as population). Moreover, mature seeds were collected from Galium populations grown in non-cultivated areas with no history of exposure to herbicide applications. Those G. spurium and G. aparine were considered as susceptible populations. The seed material was collected in big plastic bags and transported to the laboratory. They were then air-dried, placed in paper bags, and saved at 3-5 oC (refrigerator) until initiation of the experiments.

Whole-plant response to herbicides [G. spurium (GS) experiments]

Eight putative resistant (R) and one susceptible GS populations were studied in two whole-plant response experiments. The first experiment was carried out at the farm of Aristotle University of Thessaloniki from winter 2014 to spring 2015, where six putative GS resistant populations and one susceptible (S) GS population were studied. The second experiment was conducted in 2015-2016 growing period at the farm of Technological Educational Institute of West Macedonia, Florina, where two additional putative GS resistant populations were studied. Experiments at Thessaloniki and Florina were established in 0.9 L plastic pots filled with a clay loam soil (31.6% clay, 48.0% silt, 20.4% sand, 1.3% organic matter, 7.8 pH) and a peat:sand mixture (1:1 v/v), respectively. Each pot was seeded with approximately 25 Galium seeds (at 1 cm depth), which were carefully covered with soil. When GS seedlings passed the cotyledon stage, they were carefully thinned to six plants per pot.

The six putative resistant GS populations were treated with the recommended (X), twice (2X), four times (4X), and eight times (8X) of the recommended field rate of the herbicides: chlorsulfuron (Glean 75 WG, DuPont Hellas) (15, 30, 60, 120 g a.i. ha-1), tribenuron methyl (Granstar 50 SG, DuPont Hellas) (15, 30, 60, 120 g a.i. ha-1), [tribenuron + mecoprop-p] (Granstar Combi SG, DuPont Hellas) ([10.9 + 800], [21.8 + 1600], [43.6 + 3200], [87.2 + 6400] g a.i. ha-1), [florasulam + 2,4-D] (Mustang 306 SE, Dow Elanco Hellas) ([5 + 240], [10 + 480], [20 + 960], [40 + 1920] g a.i. ha-1), and [florasulam + aminopyralid] (Lancelot 450 WG, Dow Elanco Hellas) ([4.95 + 9.9], [9.9 + 19.8], [19.8 + 39.6], [39.6 + 79.2] g a.i. ha-1). The susceptible GS population was treated with one eighth (1/8X) of, a quarter (1/4X) of, half (1/2X) of, and the recommended rate (X) of the above herbicides, i.e., chlorsulfuron (1.87, 3.75, 7.5, 15 g a.i. ha-1), tribenuron (1.87, 3.75, 7.5, 15 g a.i. ha-1), [tribenuron + mecoprop-p] ([1.4 + 100], [2.7 + 200], [5.4 + 400], [10.9 + 800] g a.i. ha-1), [florasulam + 2,4-D] ([0.62 + 30], [1.25 + 60], [2.5 + 120], [5 + 240] g a.i. ha-1), [florasulam + aminopyralid] ([0.62 + 12.3], [12.3 + 24.7], [24.7 + 49.5], [4.95 + 9.9] g a.i. ha-1). For obtaining additional information on the resistance status of the GS populations, the two putative resistant GS populations evaluated at the farm of Technological Educational Institute of West Macedonia, Florina, in addition to the herbicide treatments described above for the six putative resistant GS populations, were also exposed to the pre-package mixture of [florasulam + fluroxypyr] applied at X, 2X, 4X, and 8X rates ([0.45 + 45], [0.90 + 90], [1.8 + 180], [3.6 + 360] g a.i. ha-1).

Herbicide applications were performed when GS plants were at the 2-3 whorl (a circular pattern of leaves occurring in Galium spp.) growth stage. Untreated plants of each population served as control. Herbicides were applied with a portable 2.4 m wide boom field plot propane-pressurized sprayer, carrying six 8002 flat-fan nozzles. The sprayer was calibrated to deliver a water volume of 300 L ha-1 at a pressure 280 kPa. Pots were moved outdoors in a net protected area and watered regularly. A randomization of pots was conducted weekly to ensure uniform growth conditions for all plants. Weed control was assessed by determining the aboveground fresh weight of plants, four weeks after treatment (WAT). Fresh weight is recommended in the assessments of herbicide efficacy, irrespective of herbicide systemic activity (translocation), according to international standards (EPPO, 2012EPPO. Design and analysis of efficacy evaluation trials. EPPO Bull. 2012;42:367-81.). Two runs of each experiment were conducted, established in a completely randomized design with four replicates, respectively.

Whole-plant response to herbicides [G. aparine (GA) experiments]

The putative resistant GA Frourio (R) population, which was evaluated in the whole-plant response pot experiment conducted at the farm of Technological Educational Institute of West Macedonia, Florina during 2016-2017, was treated with the same field rates (X, 2X, 4X, and 8X) of all the above herbicides used for the evaluation of the two putative resistant GS populations in Florina. On the other hand, the susceptible GA Frourio (S) population received 1/8X, 1/4X, 1/2X, and X field rate of the same herbicides used for the putative resistant GA population. An untreated control was included for each population.

Two runs of each experiment were carried out in a completely randomized design with three replicates, whereas the herbicide application, the pot randomization, and the weed control assessments were performed in the same way as described above.

Amplification and sequencing of the ALS gene fragment

For the amplification of the als gene, plant material was collected from six plants per pot, from four pots per each abovementioned resistant or susceptible population. All resistant plants and six susceptible plants in each pot (replicated four times) were treated with the label rate of tribenuron (15 g a.i. ha-1) at the 2-3 whorl growth stage, whereas six susceptible plants in each pot (replicated four times) were left untreated. This treatment was applied for eliminating individual susceptible plants from the resistant populations and ensuring susceptibility of the susceptible population. Leaf parts of surviving plants from the three resistant GS populations were collected and immediately stored at -28 oC. They were then used for extraction of the DNA. Additionally, leaf parts of single plants from the susceptible population (i.e., plants not exposed to tribenuron) were harvested. Leaf samples from three different plants were collected from each resistant and susceptible GS population for sequencing. A quantity of leaf tissue 100 mg (three plants for each population) was used for extraction of genomic DNA with the NucleoSpin® Plant II kit (MACHEREY NAGEL GmbH & Co. KG, Düren, Germany) following manufacturers’ protocol. The als gene fragment (434 bp) (the fragment that includes the Trp-574 codon) was amplified from the genomic DNA of the tested populations (R and S) with two primers: 52 - GGTTGGGAGCAATGGGGTT-32 and the reverse primer 52 - ACTTGGAATCATCGGCAGCA-32 . The two primers (F and R), produced by INVITROGEN, were designed based on the JN038048.1 G. spurium isolate CHO_sequence of acetolactate synthase (ALS). These primers were designed to investigate the region 1504-1938bp of the als gene that includes the Trp-574 codon. The polymerase chain reaction (PCR) included 10 µm of each forward and reverse primer, 1.5 mM MgCl2, 0.2 mM deoxyribonucleotide triphosphate (dNTPs), 2 µL of the supplied 10x thermophilic buffer, 1 U Kapa Taq DNA polymerase in 20 mL mixture 1, and mL of genomic DNA diluted at 20 ng/µL. Amplification was performed in a Veriti 96 wells model thermocycler using the following cycles: DNA denaturation for 3 min at 95 oC, denaturation for 30 s at 95 oC (35 cycles), annealing at 59 oC for 20 s and elongation at 72 oC for 30 s, with a final elongation at 72 oC for 1 min. The derived products were separated in agarose gel (1.5%) and then purified according to the NucleoSpin® Extract II kit protocol. The sequencing of the purified PCR product was performed in the Immunology and Histocompability Department, School of Medicine, University of Thessaly. The forward primer was used for each PCR product. The sequences were aligned with the CLUSTAL W software (multiple alignment of nucleic acid and protein sequences) using the MEGA5 and/or Bioedit. The sequence of each sample was performed in both strands (F and R), but the F strand is presented in this study (Figure 1).

Figure 1
Alignment of the sequenced genomic DNA originating from one susceptible (S) and three (GS 1, GS 6, GS 8) resistant (R) G. spurium populations.

Data analysis

Fresh weight data were expressed as percentages of control (based on fresh weight reduction % of untreated control), as a common approach in related studies of the literature (Ruiz-Santaella et al., 2006Ruiz-Santaella JP, De-Prado R, Wagner J, Fischer AJ, Gerhards R. Resistance mechanisms to cyhalofop-butyl in a biotype of Echinochloa phyllopogon (Stapf) Koss. from California. J Plant Dis Protec. 2006;S20:95-100.; Damalas et al., 2012Damalas CA, Lithourgidis A, Eleftherohorinos IG. Echinochloa species control in maize (Zea mays L.) with sulfonylurea herbicides applied alone and in mixtures with broadleaf herbicides. Crop Protec. 2012;34:70-5.) and were subjected to analysis of variance (ANOVA) separately for each experiment. First, data derived from the two dose-response experiments for the putative GS R populations carried out in Thessaloniki were analyzed over two runs using a 6 x 5 x 4 split-plot approach (6 populations x 5 herbicides x 4 herbicide rates), where populations were considered the main plots and herbicide by rate treatments the subplots. Second, data obtained from the GS S population were analyzed over two runs using a 5 x 4 factorial approach (5 herbicides x 4 herbicide rates). In addition, data obtained for the two putative GS R populations studied in Florina were analyzed over two runs using a 2 x 6 x 4 split-plot approach (2 populations x 6 herbicides x 4 herbicide rates), where populations were considered the main plots and herbicide by rate treatments the subplots. Third, regarding the GA experiments, an ANOVA was performed over two runs using a 6 x 4 factorial approach (6 herbicides x 4 herbicide rates) for putative R or S populations. Because no significant treatment by repeated runs interaction was found, the populations by herbicides by rates interaction means were averaged across two runs and compared with Fisher’s protected LSD test (least significance difference) at P<0.05. Fourth, the pooled over two runs fresh weight data (% of untreated control) of each population were subjected to nonlinear regression analysis, where applicable, using the log-logistic equation 1 (Seefeldt et al., 1995Seefeldt SS, Jensen JE, Fuerst EP. Log-logistic analysis of herbicide dose-response relationships. Weed Technol. 1995;9:218-27.).

y = C + D - C 1 + e x p b l o g x - l o g G R 50 (eq. 1)

where C = the lower limit, D = the upper limit, b = the slope at the GR50, and GR50 = the herbicide rate (g a.i. ha-1) required for 50% reduction of fresh weight. The independent variable (x) was the herbicide rate and the dependent variable (y) was the fresh weight. The GR50 estimated for the first herbicide of each pre-packaged formulations.

RESULTS AND DISCUSSION

G. spurium experiments

Chlorsulfuron and tribenuron applied at 4X rates reduced fresh weight of all six GS populations in the experiment of Thessaloniki by 25-73% and 12-47%, respectively (Table 1). However, all populations were totally controlled (100%) with [tribenuron + mecoprop-p], [florasulam + 2,4-D], and [florasulam + aminopyralid], except GS 1 Kitros and GS 6 Kolindros populations that were not controlled with [florasulam + 2,4-D] even with the 8X rate (Table 1). This was also confirmed by the estimated GR50 values for chlorsulfuron and tribenuron, which ranged from 26.9 to 195.5 and 56.9 to 330.3 g a.i. ha-1, respectively. Among these populations, the GS 4 Trigoniko and GS 6 Kolindros showed the highest GR50 values for chlorsulfuron (195.5 and 192.9 g a.i. ha-1) and tribenuron (203.4 and 330.3 g a.i. ha-1). Regarding the GR50 values for the remaining herbicides, these were not estimated (except for florasulam + 2,4-D for GS 1 Kitros) as calculations were not applicable. On the contrary, the susceptible population GS Kitros was totally controlled with the X rates of all herbicides tested, showing high sensitivity even to X/2 rate in the case of mixtures with auxin-type herbicides (Table 2). This was the reason for the lower GR50 values (0.14 g a.i. ha-1 to 2.9 g a.i. ha-1) as compared with the previously mentioned GR50 values for the resistant populations.

Table 1
Estimated GR50 values (g a.i. ha-1), where applicable, of wheat herbicides used for control of Galium spurium (GS) populations (Thessaloniki experiments)
Table 2
Estimated GR50 values (g a.i. ha-1), where applicable, of wheat herbicides used for control of one Galium spurium (GS) population (Thessaloniki experiments)

Both GS populations studied in Florina showed low and moderate levels of control with chlorsulfuron and tribenuron applied at 8X rates, with tribenuron being less effective than chlorsulfuron (Table 3). This difference was supported by the estimated GR50 values for chlorsulfuron, which were 31.1 and 73.4 g a.i. ha-1 for the two populations, whereas the respective values for tribenuron were 119.7 and 112.2 g a.i. ha-1. However, the GS 7 Melinikitsi population was totally controlled (100%) with [tribenuron + mecoprop-p], [florasulam + 2,4-D], [florasulam + aminopyralid], and [florasulam + fluroxypyr], whereas this was not the case for GS 8 Tripotamos population that was not effectively controlled with any rate of [florasulam + 2,4-D] and for this reason the GR50 value for florasulam was 11.9 g a.i. ha-1 (Table 3). In addition, the X and 2X of [florasulam + aminopyralid] indicated 80 and 91% control of GS 8 Tripotamos population, respectively, whereas the extra treatment of [florasulam + fluroxypyr] was highly effective against both populations. Because the lowest rate of the other herbicides did not reduce fresh weight by 50%, the GR50 values were not estimated as calculation was not applicable.

Table 3
Estimated GR50 values (g a.i. ha-1), where applicable, of wheat herbicides used for control of Galium spurium (GS) populations (Florina experiments)

G. aparine experiments

The putative resistant GA Frourio (R) population studied in Florina showed low to moderate levels of control with up to 4X rate of chlorsulfuron and tribenuron, and this was confirmed by the estimated GR50 values, which were 60.3 and 40 g a.i. ha-1 for chlorsulfuron and tribenuron, respectively (Table 4). However, control of this weed population was excellent (100%) with the recommended rates of [tribenuron + mecoprop-p], [florasulam + 2,4-D], [florasulam + aminopyralid], and [florasulam + fluroxypyr], and this was the reason that GR50 values for these herbicides were not estimated as calculation was not applicable. The susceptible GA Frourio population (S) was effectively controlled with the recommended rates of all herbicides (Table 5), and for this reason the estimated GR50 values for the herbicides tested were low and ranged from 0.14 to 2.4 g a.i. ha-1.

Table 4
Estimated GR50 values (g a.i. ha-1), where applicable, of wheat herbicides used for control of a Galium aparine (GA) population (Florina experiments)
Table 5
Estimated GR50 values (g a.i. ha-1), where applicable, of wheat herbicides used for control of a Galium aparine (GA) population (Florina experiments)

Amplification and sequencing of the als gene fragment

The sequenced region (434 bp) of the als gene from the four GS individuals (three individuals from the susceptible and three from each of the resistant GS 1 Kitros, GS 6 Kolindros, and GS 8 Tripotamos populations), aligned with the als gene sequence obtained from GenBank (Accession number: Arabidopsis thaliana X51514), showed 72-73% identity with the sequence of the als gene of A. thaliana X51514 (data not shown). Arabidopsis thaliana X51514 was used as the reference gene for the numbering of the amino acids, because is the most commonly used (standard) in the literature. Chromatograms of the DNA sequence revealed Trp (TGG) at position 574 in the three plants of the susceptible population as in the A. thaliana, while the respective DNA sequence of the three GS resistant populations (GS 1 Kitros, GS 6 Kolindros, and GS 8 Tripotamos) revealed a point mutation at the second base of the codon Trp-574 that resulted in the substitution of Trp-574 by Leu (TTG) in all plants (Figure 1). All plants belonging to three resistant populations had the point mutation resulting in substitution of Trp-574 by Leu in both alleles (homozygous plants), although certain other positions showed ambiguous base calls.

The low control levels of GS 1 Kitros, GS 6 Kolindros, and GS 8 Tripotamos populations, with up to 8X rates of the formulated mixture [florasulam + 2,4-D], confirms strong evidence for cross-resistance to both sulfonylurea (chlorsulfuron, tribenuron) and triazolopyrimidine (florasulam) herbicides. The amino acid substitution of Trp-574 by Leu in the analysed als sequences from these three GS resistant populations, along with the respective estimated high GR50 values, support the above confirmed cross-resistance to sulfonylurea and triazolopyrimidine herbicides at whole plant level. The same substitution of Trp-574 by Leu was also reported by Sun et al. (2011Sun J, Wang J-X, Zhang H-J, Liu J-l, Bian S-N. Study on mutations in ALS for resistance to tribenuron-methyl in Galium aparine L. Agric Sci China 2011;10:86-91.), Beckie et al. (2012Beckie HJ, Warwick SI, Sauder CA, Kelln GM. Acetolactate synthase inhibitor-resistant false cleavers (Galium spurium) in Western Canada. Weed Technol. 2012;26:151-5.), and Ntoanidou et al. (2017Ntoanidou S, Madesis P, Diamantidis G, Eleftherohorinos I. Trp574 substitution in the acetolactate synthase of Sinapis arvensis confers cross-resistance to tribenuron and imazamox. Pestic Biochem Physiol. 2017;142:9-14.) for the G. spurium, G. aparine, and Sinapis arvensis cross-resistant species to ALS-inhibitors, respectively.

The high levels of cross-resistance of two G. spurium populations to chlorsulfuron, tribenuron, and florasulam are in agreement with results reported in a G. spurium population from Canada, which also showed high levels of cross-resistance to the ALS inhibitors triasulfuron, thifensulfuron/tribenuron, and sulfometuron (Hall et al., 1998Hall LM, Stromme KM, Horsman GP, Devine MD. Resistance to acetolactate synthase inhibitors and quinclorac in a biotype of false cleavers (Galium spurium). Weed Sci. 1998;46:390-6.; Van Eerd, 2004Van Eerd LL, McLean MD, Stephenson GR, Hall JC. Resistance to quinclorac and ALS-inhibitor herbicides in Galium spurium is conferred by two distinct genes. Weed Res. 2004;44:355-65.; Van Eerd et al., 2005Van Eerd LL, Stephenson GR, Kwiatkowski J, Grossmann K, Hall JC. Physiological and biochemical characterization of quinclorac resistance in a false cleavers (Galium spurium L.) biotype. J Agric Food Chem. 2005;53:1144-51.; Beckie and Tardif, 2012Beckie HJ, Warwick SI, Sauder CA, Kelln GM. Acetolactate synthase inhibitor-resistant false cleavers (Galium spurium) in Western Canada. Weed Technol. 2012;26:151-5.). In addition, the G. aparine cross-resistance to chlorsulfuron, tribenuron, and florasulam agree partially with a resistant population to tribenuron in China (Sun et al., 2011Sun J, Wang J-X, Zhang H-J, Liu J-l, Bian S-N. Study on mutations in ALS for resistance to tribenuron-methyl in Galium aparine L. Agric Sci China 2011;10:86-91.). However, as there are no confirmed cases of Galium spp. resistance in Europe, this is the first report of Galium spp. resistance to ALS-inhibiting herbicides in Europe.

A number of auxin-type herbicides (e.g., 2,4-D, dicamba, fluroxypyr, aminopyralid, mecoprop-p) are registered as formulated mixtures with ALS-inhibiting herbicides aiming to broaden the spectrum of weed control and mitigate the evolution of herbicide resistance (Beckie and Tardif, 2012Beckie HJ, Warwick SI, Sauder CA, Kelln GM. Acetolactate synthase inhibitor-resistant false cleavers (Galium spurium) in Western Canada. Weed Technol. 2012;26:151-5.). Some of these mixtures of ALS-inhibiting herbicides with auxin-type herbicides were highly effective against the resistant Galium populations of the present study. Therefore, tank-mixing ALS-inhibiting herbicides with herbicides having different mode of action and more importantly with a less resistant-prone site of action could be an effective strategy for the control of the already resistant biotypes and thus delaying the evolution of herbicide resistance in key weed species of cereals. Unfortunately, certain auxin herbicides have been found to negatively affect the performance of ALS-inhibiting herbicides against important grass weed species (Damalas and Eleftherohorinos, 2001Damalas CA, Eleftherohorinos IG. Dicamba and atrazine antagonism on sulfonylurea herbicides used for johnsongrass (Sorghum halepense) control in maize (Zea mays). Weed Technol. 2001;15:62-7.; Damalas et al., 2012) and this should be considered before different herbicides are mixed in the spray solution. Bromoxynil, a PS-II inhibitor that is highly effective on a wide spectrum of broadleaf weeds in cereals and rarely is involved in herbicide interactions in mixtures, could also be a valuable option for winter cereal growers either alone or as a mixture partner (Baghestani et al., 2008Baghestani MA, Zand E, Soufizadeh S, Beheshtian M, Haghighi A, Barjasteh A, et al. Study on the efficacy of weed control in wheat (Triticum aestivum L.) with tank mixtures of grass herbicides with broadleaved herbicides. Crop Protec. 2008;27:104-11.; Torra et al., 2010Torra J, Cirujeda A, Taberner A, Recasens J. Evaluation of herbicides to manage herbicide-resistant corn poppy (Papaver rhoeas) in winter cereals. Crop Protec. 2010;29:731-6.; Safdar et al., 2011Safdar ME, Asif M, Ali A, Aziz A, Yasin M, Aziz M, et al. Comparative efficacy of different weed management strategies in wheat. Chilean J Agric Res. 2011;71:195-204.; Kumar and Jha, 2015Kumar V, Jha P. Effective preemergence and postemergence herbicide programs for Kochia control. Weed Technol. 2015;29:24-34.). Otherwise, non-chemical methods of weed control, such as systematic crop rotation, use of competitive cultivars, and on-time planting with correct seeding rates, should be implemented.

The excellent control of all and the four (2 GS and 2 GA) Galium populations with the respective formulated mixtures [tribenuron + mecoprop-p] and [florasulam + fluroxypyr] differs partially with results reported by Froud-Williams and Ferris-Kaan (1991Froud-Williams RJ, Ferris-Kaan R. Intraspecific variation among populations of cleavers (Galium aparine). In: Proceedings of Brighton Crop Protection Conference, Weeds. Conference paper. Wallingford: CAB International; 1991. p.1007-14.) and Hill et al. (1996Hill AL, Harvey BMR. An assessment of the possible reasons for differential tolerance to fluroxypyr in selected populations of Galium aparine. Weed Res. 1996;36:15-20.), who found a significant genetic variation within G. aparine biotypes in their response to these two auxin-type herbicides. It is worth noting that the application of MCPA, 2,4-D, and the formulated mixture [florasulam + 2,4-D] or [bromoxynil + 2,4-D] has been widely adopted in northern Greece for weed control in winter cereals to manage sulfonylurea-resistant Papaver rhoeas and Sinapis arvensis with cross-resistance to sulfonylureas due to Pro-197 mutation (Kaloumenos et al., 2009Kaloumenos NS, Dordas CA, Diamantidis GC, Eleftherohorinos IG. Multiple Pro197 substitutions in the acetolactate synthase of corn poppy (Papaver rhoeas) confer resistance to tribenuron. Weed Sci. 2009;57:362-8., 2011) and all chemistries of ALS-inhibiting herbicides due to a Trp-574-Leu mutation in the als gene, respectively (Ntoanidou et al., 2017Ntoanidou S, Madesis P, Diamantidis G, Eleftherohorinos I. Trp574 substitution in the acetolactate synthase of Sinapis arvensis confers cross-resistance to tribenuron and imazamox. Pestic Biochem Physiol. 2017;142:9-14.).

The present study showed clearly that the poor control of 7 GS populations and 1 GA population reported by some cereal farmers in northern Greece is attributed to development of cross-resistance to ALS inhibitors. This could be the result of wheat monoculture as a main agronomic practice implemented in major wheat production areas, which were typically accompanied by the repeated use of those herbicides for at least 20 years. Indeed, chlorsulfuron was widely used due to long residual activity, enabling season-long control of weed flushes and due to excellent control of most broadleaf weeds and suppression of some important grasses in cereals. However, although the long residual activity of chlorsulfuron improved weed control, it exerted intense selection pressure on many weeds that have a prolonged germination period throughout the growing season and finally resulted in the development of weed resistance. This is confirmed by many populations of rigid ryegrass (Lolium rigidum), Papaver rhoeas, and Sinapis arvensis recorded in wheat monocultures of northern and central Greece with cross-resistance to sulfonylurea herbicides and other ALS-inhibiting herbicides (Kotoula-Syka et al., 2000Kotoula-Syka E, Tal A, Rubin B. Diclofop-resistant Lolium rigidum from northern Greece with cross-resistance to ACCase inhibitors and multiple resistance to chlorsulfuron. Pest Manag Sci. 2000;56:1054-8.; Kaloumenos et al., 2011Kaloumenos NS, Adamouli VN, Dordas CA, Eleftherohorinos IG. Corn poppy (Papaver rhoeas) resistance to ALS-inhibiting herbicides. Pest Manag Sci. 2011;67:574-85., 2012Kaloumenos NS, Tsioni VC, Daliani EG, Papavassileiou SE, Vassileiou AG, Laoutidou PN, et al. Multiple Pro-197 substitutions in the acetolactate synthase of rigid ryegrass (Lolium rigidum) and their impact on chlorsulfuron activity and plant growth. Crop Protec. 2012;38:35-43.; Ntoanidou et al., 2017Ntoanidou S, Madesis P, Diamantidis G, Eleftherohorinos I. Trp574 substitution in the acetolactate synthase of Sinapis arvensis confers cross-resistance to tribenuron and imazamox. Pestic Biochem Physiol. 2017;142:9-14.).

The high GR50 values for ALS-inhibiting herbicides used in this study provided strong evidence for high levels of resistance of both GS and GA species to the ALS-inhibiting herbicides chlorsulfuron and tribenuron, as well as additional cross-resistance to florasulam for three GS populations. Furthermore, DNA sequence of the last three cross-resistant GS populations revealed a point mutation at position Trp-574, causing amino acid substitution by Leu in the ALS enzyme. However, all Galium populations were controlled with the respective formulated mixtures of [tribenuron + mecoprop-p] or [florasulam + fluroxypyr]. In all cases, the resistance was closely associated with wheat monoculture and continuous use of the same most convenient herbicide (in terms of efficacy and costs) for years. These findings strongly suggest that actions should be taken for preventing further resistance evolution by implementing systematic crop rotation and herbicide rotation. Moreover, reliance on herbicides should be decreased and alternative tools of weed control, such as occasional deep ploughing, should be introduced. To achieve these goals, training of growers, crop consultants, and field practitioners in tackling herbicide resistant weed species and adopting integrated management practices for reducing herbicide selection pressure should be a top priority.

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Publication Dates

  • Publication in this collection
    17 Oct 2019
  • Date of issue
    2019

History

  • Received
    10 July 2018
  • Accepted
    05 Oct 2018
Sociedade Brasileira da Ciência das Plantas Daninhas Departamento de Fitotecnia - DFT, Universidade Federal de Viçosa - UFV, 36570-000 - Viçosa-MG - Brasil, Tel./Fax::(+55 31) 3899-2611 - Viçosa - MG - Brazil
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