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Print version ISSN 1415-4757On-line version ISSN 1678-4685
Genet. Mol. Biol. vol.31 no.1 São Paulo 2008
HUMAN AND MEDICAL GENETICS
Cynara Gomes BarbosaI; Claudio Lima SouzaI; José Pereira de Moura NetoI; Maria da Glória Bomfim ArrudaIII; José Henrique BarretoIV; Mitermayer Galvão ReisI; Marilda Souza GoncalvesI, II
ICentro de Pesquisa Gonçalo Moniz, Fundação Oswaldo Cruz, Salvador, BA, Brazil
IIFaculdade de Farmácia, Universidade Federal da Bahia, Salvador, BA, Brazil
IIIDepartamento de Hematologia, Faculdade de Medicina Edgard Santos, Hospital Universitário, Universidade Federal da Bahia, Salvador, BA, Brazil
IVClinica Oncológica, Salvador, Bahia, Brazil
Methylenetetrahydrofolate reductase (MTHFR: EC 126.96.36.199) polymorphisms are associated to acute lymphoid leukemia in different populations. We used the polymerase chain reaction and the restriction fragment length polymorphism method (PCR-RFLP) to investigate MTHFR C677T and A1298C polymorphism frequencies in 67 patients with chronic myeloid leukemia (CML), 27 with acute myeloid leukemia FAB subtype M3 (AML-M3) and 100 apparently healthy controls. The MTHFR mutant allele frequencies were as follows: CML = 17.2% for C677T, 21.6% for A1298C; AML-M3 = 22.2% for C677T, 24.1% for A1298C; and controls = 20.5% for C677T, 21% for A1298C. Taken together, our results provide evidence that MTHFR polymorphisms have no influence on the development of CML or AML-M3.
Key words: AML, CML, MTHFR polymorphisms.
Leukemias are clonal diseases which commonly arise as a result of genetic damage deregulating blood cell development or hematopoiesis. The risk of leukemia may be increased by both quantitative and qualitative changes in folate metabolism (Hur et al., 2006). Methylenetetrahydrofolate reductase (MTHFR: EC 188.8.131.52) is a key enzyme in folate and homocysteine (Hcy) metabolism which catalyzes the reduction of 5, 10-methylenetetrahydrofolate to 5-methylenetetrahydrofolate, the predominant circulatory form of folate and carbon donor for the remethylation of homocysteine to methionine (Skibola et al., 1999). Various studies have described an association between the presence of the C677T and A1298C MTHFR polymorphisms and the risk of leukemias (Skibola et al., 1999; Franco et al., 2001; Wiemels et al., 2001; Moon et al., 2007; Zanrosso et al., 2006), suggesting that alteration of folate metabolism in the presence of enzyme variant forms can protect against acute lymphoid leukemia (ALL) but increase the risk of chronic myeloid leukemia (CML). However, this association was not related to acute myeloid leukemia (AML) in British (Skibola et al., 1999) and Spanish populations (Bolufer et al., 2007).
Folate deficiency has been associated with uracil misincorporation into DNA, increasing the risk of chromosomal aberrations and presumably the onset of the leukemogenic process (Wiemels et al., 2001).
We investigated the MTHFR C677T and A1298C polymorphism frequency among AML-M3 and CML patients from Salvador in the Northeastern Brazilian state of Bahia. The frequency of these polymorphisms vary according to the population, being less common among Africans at 1.6% for 677TT and 4.4% for 1298CC (Gueant-Rodriguez et al., 2006) than in other ethnic groups such as Caucasians in which the frequency is 12.3% for 677TT and 11% for 1298CC (Skibola et al., 1999).
We carried out a cross-sectional study of 94 patients with myeloid leukemia, of which 67 (30 (45.5%) female and 36 male (54.5%); median age 44 y, range 09 y to 93 y) had chronic myeloid leukemia (CML) and 27 (15 female (53.6%) and 13 male (46.4%); median age 27 y, (range 06 y to 70 y) with acute myeloid leukemia FAB subtype M3 (AML-M3) selected between 1999 and 2003 from several institutions treating patients with malignant diseases, the institutions being: Oncology Clinic; San Raphael Hospital; Edgard Santos Federal University Hospital and Cehon Clinic. All these institutions are in the city of Salvador, Bahia, Brazil. The control group consisted of 100 (47 female (47%) and 53 male(53%); median age 29 y, range 18 y to 40 y) apparently healthy individuals randomly chosen from the general population. All individuals included in this study were from Bahia, Brazil, a state which has a highly mixed population, mainly of African origin. The study was approved by the Oswaldo Cruz Research Foundation's human research ethics Committee. Bone marrow and peripheral blood samples were taken only after signed informed consent forms were obtained from patients or an official responsible.
We isolated DNA and RNA from bone marrow cells or peripheral blood leukocytes, using TrizolR (Gibco-BRL, USA) for RNA extraction and a Genomic Blood DNA Purification Kit (Amersham Pharmacia Biotech, USA) according to the guidelines of the manufacturer. The translocations t(9;22)(q34;q11) for CML patients and t(15;17) (q22;q12-21) for AML-M3 were investigated using reverse transcriptase PCR (RT-PCR) as previously described (Borrow et al., 1992; Artigas et al., 2002).
The MTHFR C677T and A1298C polymorphisms were investigated using the polymerase chain reaction and restriction fragment length polymorphism (PCR-RFLP) technique and the Hinf I and Mbo II restriction enzymes (New England Biolabs, USA) (Wiemels et al., 2001).
Descriptive analyses included gene and allelic frequencies and we also calculated the odds ratio (OR) as an estimate of relative risk and the 95% confidence interval (CI). Moreover, the Hardy-Weinberg equilibrium was tested. Significance was considered for p < 0.05. All analyses were carried out using the EPI INFO software, version 6.04, that is a public domain software produced by the Centers for Disease Control (CDC) and the World Health Organization (WHO).
All 67 CML patients had t(9;22)(q34;q11) translocations and all 27 AML-M3 patients had t(15;17) (q22;q11-21) translocations. The total MTHFR mutant allele frequencies were as follows: CML = 17.2% for C677T, 21.6% for A1298C; AML-M3 = 22.2% for C677T, 24.1% for A1298C; and controls = 20.5% for C677T, 21% for A1298C. The C677T and A1298C polymorphism frequency distributions were in agreement with the Hardy-Weinberg equilibrium.
The MTHFR C677T and A1298C polymorphisms showed a similar distribution for the heterozygous and homozygous genotypes among the leukemia (CML and AML-M3) and control groups (Table 1). The double heterozygous frequencies for both MTHFR polymorphisms was 6.4% in the leukemia group and 5.0% in control groups. There was no double homozygous for both polymorphisms (Table 2).
The MTHFR enzyme and its involvement in folate metabolism have been considered a cancer susceptibility factor and the presence of the MTHFR polymorphism has been associated to DNA hypomethylation and chromosomal breaks and damage (Krajinovic et al., 2004). Skibola et al (1999) showed that variant MTHFR genotypes, including 677TT, 1298AC or 1298CC have a lower risk of developing acute lymphoid leukemia (ALL) in adulthood although it did not influence AML patients of the same age. Their observation was supported by subsequent studies performed in childhood AML (Wiemels et al., 2001). However, a similar study carried out among a highly mixed population of Brazilian leukemia patients reported the opposite effect for the A1298C polymorphism, which was associated with an elevated risk factor for non-white AML children which could also be associated with the high frequency of malnutrition and lower socioeconomic status of African descendants in Brazil (da Costa Ramos et al., 2006). A sample population (n = 6,864) from Northeastern Brazilian showed an estimated 97% interethnic panmixia, possibly due to the intensive African slave trade when more than five million people from several African countries were brought to Brazil between 1550 and 1850, principally between the eighteenth and nineteenth centuries (Krieger et al., 1965). However, Chiusolo et al (2004) found no evidence of an association between the MTHFR C677T and A1298C genotypes and susceptibility to ALL among Italian patients.
Our present findings demonstrate a similar MTHFR polymorphism frequency distribution among CML and AML-M3 patients and controls, while Hur et al. (2006) demonstrated a significant decrease in CML risk among Koreans with the A1298C polymorphism. These differences indicate the possible influence of racial, ethnic and nutritional factors in several population groups and the MTHFR polymorphisms in the relationship between MTHFR polymorphisms and leukemia (Zanrosso et al., 2006). Moreover, lymphoid cells may require more folate and be more susceptible to folate deficiency, resulting in higher DNA damage in this lineage than in myeloid cells (Skibola et al., 1999).
The MTHFR polymorphism frequencies described here, together with the absence of double homozygotes for the C677T/A1298C mutations, suggest the rarity of these mutations in cis which are probably incompatible with fetus development (Skibola et al., 1999; Chiusolo et al., 2004; Zanrosso et al., 2006).
In conclusion, we found no association between the MTHFR C677T and A1298C polymorphisms among AML-M3 and CML patients from the Northeastern Brazilian state of Bahia. Therefore, further studies are necessary to consider the interaction of folate nutritional status and genes associated to folate metabolism, in order to establish its role in leukemogenesis.
Financial support was provided by the Brazilian agency FAPESB (grant number 277/04).
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Send correspondence to:
Marilda Souza Goncalves
Centro de Pesquisa Gonçalo Moniz, Fundação Oswaldo Cruz
Rua Waldemar Falcão 121, Brotas
40296-710 Salvador, BA, Brazil
Received: March 29, 2007; Accepted: December 7, 2007.
Associate Editor: Francisco Mauro Salzano