Chromosomal localization of the 18S-28S and 5S rRNA genes and (TTAGGG)n sequences of butterfly lizards (Leiolepis belliana belliana and Leiolepis boehmei, Agamidae, Squamata)

Chromosomal localization of the 18S-28S and 5S rRNA genes and (TTAGGG)n sequences of butterfly lizards (Leiolepis belliana belliana and Leiolepis boehmei, Agamidae, Squamata)

Kornsorn Srikulnath^I,II,IV,V; Yoshinobu Uno^II; Kazumi Matsubara^III; Amara Thongpan^IV; Saowanee Suputtitada^IV; Somsak Apisitwanich^IV,V; Chizuko Nishida^VI; Yoichi Matsuda^VII

^ILaboratory of Animal Cytogenetics and Comparative Genomics, Department of Genetics, Faculty of Science, Kasetsart University, Bangkok, Thailand

^IIBiosystems Science Course, Graduate School of Life Science, Hokkaido University, Sapporo, Japan

^IIIDepartment of Information and Biological Sciences, Graduate School of Natural Sciences, Nagoya City University, Nagoya, Japan

^IVDepartment of Genetics, Faculty of Science, Kasetsart University, Bangkok, Thailand

^VCenter for Advanced Studies in Tropical Natural Resources, National Research University-Kasetsart University, Bangkok, Thailand

^VILaboratory of Animal Cytogenetics, Department of Biological Sciences, Faculty of Science, Hokkaido University, Sapporo, Japan

^VIILaboratory of Animal Genetics, Department of Applied Molecular Biosciences, Graduate School of Bioagricultural Sciences, Nagoya University, Nagoya, Japan

^{Send correspondence to}

ABSTRACT

Chromosomal mapping of the butterfly lizards Leiolepis belliana belliana and L. boehmei was done using the 18S-28S and 5S rRNA genes and telomeric (TTAGGG)n sequences. The karyotype of L. b. belliana was 2n = 36, whereas that of L. boehmei was 2n = 34. The 18S-28S rRNA genes were located at the secondary constriction of the long arm of chromosome 1, while the 5S rRNA genes were found in the pericentromeric region of chromosome 6 in both species. Hybridization signals for the (TTAGGG)n sequence were observed at the telomeric ends of all chromosomes, as well as interstitially at the same position as the 18S-28S rRNA genes in L. boehmei. This finding suggests that in L. boehmei telomere-to-telomere fusion probably occurred between chromosome 1 and a microchromosome where the 18S-28S rRNA genes were located or, alternatively, at the secondary constriction of chromosome 1. The absence of telomeric sequence signals in chromosome 1 of L. b. belliana suggested that its chromosomes may have only a few copies of the (TTAGGG)n sequence or that there may have been a gradual loss of the repeat sequences during chromosomal evolution.

Key words: chromosomal mapping, FISH, interstitial telomeric site, Leiolepidinae, ribosomal RNA gene, telomeric sequence.

Squamate reptiles, the most diverse reptilian order, have traditionally been classified into three suborders: Amphisbaenia (worm lizards), Serpentes (snakes) and Lacertilia (lizards). Lizards can be further classified into six infraorders (Iguania, Gekkota, Scincomorpha, Diploglossa, Dibamia and Platynota) (Uetz, 2011). The butterfly lizards (Leiolepis, Agamidae, Iguania) are burrowers inhabiting Southeast Asia. These lizards show a wide variety of karyotypes and sexual systems. In Thailand, there are three species of Leiolepis (L. belliana, L. reevesii rubritaeniata and L. boehmei) that are barely distinguished from other congeneric species by their typical scale and skin coloration (Peters, 1971). Leiolepis belliana occurs as two subspecies, Leiolepis belliana belliana and L. belliana ocellata. Leiolepis b. belliana occurs throughout the Thailand, while L. b. ocellata is found in the upper northern region and L. reevesii rubritaeniata occurs only in the northeast. All of these species are bisexual. Putative unisexuality has been reported for the diploid L. boehmei, for which only females have been detected in the provinces of Songkhla and Nakhon Si Thammarat in southern Thailand (Darevsky and Kupriyanoya, 1993; V. Aranyavlai, 2003, PhD thesis, Chulalongkorn University, Bangkok). Our previous phylogenetic analysis of nuclear genes revealed that L. reevesii rubritaeniata (2n = 36) and L. b. belliana (2n = 36) are more closely related to each other than to L. boehmei (2n = 34) (Srikulnath et al., 2010).

Ribosomal RNA genes are tandemly arrayed repeats that are believed to have evolved in a concerted manner. Since all copies of ribosomal RNA genes are homogenous within individuals and species, they represent an important source of information for karyological characterization and evolutionary relationships (Srikulnath, 2010). Telomeric (TTAGGG)n sequences are commonly found at telomeres (Meyne et al., 1990) but are also observed at non-telomeric sites known as interstitial sites (ITSs) (Ventura et al., 2006; Srikulnath et al., 2009a). ITSs can form large blocks of telomeric sequences known as heterochromatic ITSs (het-ITSs) that are located mainly in centromeric or pericentromeric regions (Ruiz-Herrera et al., 2008). ITSs may be the remnants of chromosomal rearrangements that provided the information involved in karyotypic evolution (Meyne et al., 1990). The 18S-28S rRNA genes are generally located on a pair of microchromosomes or chromosome 2q in Iguania (Porter et al., 1991).

In our previous study, we mapped the 18S-28S and 5S rRNA genes and telomeric (TTAGGG)n sequences of L. reevesii rubritaeniata chromosomes (Srikulnath et al., 2009a). The 18S-28S gene was located at the secondary constriction of the long arm of chromosome 1, and the 5S rRNA gene at the pericentromeric region of chromosome 6. Hybridization signals for (TTAGGG)n sequences were observed at the telomeric ends of all chromosomes and interstitially at the same position as the 18S-28S rRNA genes, suggesting that in L. reevesii rubritaeniata telomere-to-telomere fusion probably occurred between chromosome 1 and a microchromosome where the 18S-28S rRNA genes were located (Srikulnath et al., 2009a).

In the Leiolepidinae, a cytogenetic map has been reported for only one species (L. reevesii rubritaeniata) (Srikulnath et al., 2009a,b). In the present study, we used fluorescent in situ hydridization (FISH) to map the 18S28S and 5S rRNA genes and telomeric (TTAGGG)n sequences in L. b. belliana and L. boehmei as representative species of Leiolepis in Thailand.

Live specimens of L. b. belliana and L. boehmei were collected from Chonburi (13º4'0" N and 101º0'0" E) and Songkla (7º12'36" N and 100º33'36" E) provinces, respectively. Their sexes were determined morphologically and confirmed by internal genital anatomy. All experimental procedures with the lizards conformed to the guidelines established by the Animal Care Committee at Hokkaido University (Japan). Although L. b. ocellata used to be found in Thailand it was not available for this study. Mitotic chromosomal preparations of L. boehmei were obtained from fibroblast cultures of heart, lung and mesentery, as described by Srikulnath et al. (2009a), whereas mitotic and meiotic chromosomes of L. b. belliana were prepared from testes, according to Imai et al. (1981).

Chromosomal locations of the 18S-28S rRNA genes, 5S rRNA genes and telomeric (TTAGGG)n sequences were determined by FISH, as previously described (Matsuda and Chapman, 1995; Srikulnath et al., 2009a). Dual-color FISH was done to compare the chromosomal locations of telomeric (TTAGGG)n sequences with those of the 18S-28S rRNA genes, whereas single FISH was use to investigate the chromosomal location of the 5S rRNA genes.

The chromosomal numbers of L. b. belliana and L. boehmei were 2n = 36 (12 macrochromosomes and 24 microchromosomes) and 2n = 34 (12 macrochromosomes and 22 microchromosomes), respectively (data not shown). These results were identical to those previously reported (V. Aranyavlai, 2003, PhD thesis, Chulalongkorn University, Bangkok).

Chromosomal mapping of the 18S-28S and 5S rRNA genes is important for karyological characterization of a species and for establishing phylogenetic relationships since these genes occur in multiple copies that facilitate detection (Pendás et al., 1994; Srikulnath, 2010). In Iguania, the 18S-28S rRNA genes are generally located on a pair of microchromosomes or chromosome 2q (Porter et al., 1991), whereas the nucleolar organizer region is located on chromosome 6 of Tropidurus species, the karyotypes of which are similar to Leiolepis (Kasahara et al., 1987). In contrast, FISH signals for the 18S-28S rRNA genes in L. b. belliana and L. boehmei were restricted to the secondary constriction in the subtelomeric region of the long arm of chromosome 1 (Figure 1A,C,^D,^F,^G,^I). These features were comparable to those of L. reevesii rubritaeniata (Srikulnath et al., 2009a).

In previous work, we showed that the 5S rRNA genes in L. reevesii rubritaeniata were located in the pericentromeric region of the long arm of chromosome 6 (Srikulnath et al., 2009a). The same localization was also observed in L. b. belliana and L. boehmei (Figure 2). These findings indicate that the position of major and minor ribosomal RNA genes may be the same among species of Leiolepis. Cytogenetic studies of more leiolepidine species, especially Uromastyx sp. which is classified in the same subfamily, are required to confirm this suggestion. Such studies would shed light on the chromosomal locations of the 18S-28S and 5S rRNA genes in the conserved karyotypes of Leiolepidinae and Iguania.

The distribution of telomeric sequences provides preliminary information on the processes involved in karyotypic evolution (Meyne et al., 1990; Srikulnath, 2010). In the present study, the (TTAGGG)n sequences were localized to the telomeric ends of all chromosomes of L. b. belliana and L. boehmei (Figure 1B,C,^E,^F,^H,J). The hybridization signals were weak on macrochromosomes, whereas high intensity signals were observed on almost all microchromosomes, which suggests site-specific amplification of the (TTAGGG)n sequences on these chromosomes. These findings were similar to those of L. reevesii rubritaeniata in our previous study (Srikulnath et al., 2009a). However, microchromosome-specific amplification of telomeric repeats has not been reported in other squamate reptiles (Pellegrino et al., 1999). Comparable hybridization patterns have also been observed in birds, including several species of Galliformes, Anseriformes and Passeriformes (Nanda et al., 2002).

Interstitial telomeric sites (ITSs) appear to be relics of chromosomal rearrangements such as fusions or inversions (Go et al., 2000). Hybridization signals for interstitial telomeric sites were found at the secondary constriction in the subtelomeric region of the long arm of chromosome 1 in L. reevesii rubritaeniata, where the (TTAGGG)n sequences co-localized with the 18S-28S rRNA genes (Srikulnath et al., 2009a). This same arrangement was also found in L. boehmei. In contrast, 18S-28S rRNA genes are generally located on a pair of microchromosomes or chromosome 2q in Iguania (Porter et al., 1991). These results suggest the possible occurrence of telomere-to-telomere fusion between a microchromosome with the 18S-28S rRNA genes and the distal end of chromosome 1 in the lineage of L. reevesii rubritaeniata and L. boehmei.

Comparison of the chromosomal maps for the butterfly lizard (L. reevesii rubritaeniata) and Japanese fourstriped rat snake (Elaphe quadrivirgata) also indicated that co-localization of the 18S-28S rRNA genes and ITSs in the subtelomeric region of LRE1q may be the result of a small paracentric inversion (Srikulnath et al., 2009b). This inversion may have occurred between the proximal region of the DYNC1H1 (dynein, cytoplasmic 1, heavy chain 1) gene and the distal region on LRE1q after the telomere-to-telomere fusion of the ancestral LRE1q and a microchromosome with the 18S-28S rRNA genes, which generally persist in Iguania (Srikulnath et al., 2009b).

An alternative explanation could be that since telomeres cap the end of chromosomes to protect them from deteriorating and fusing with neighboring chromosomes then chromosomal reorganization would lead to telomere exclusion and an absence of ITS at the fusion site. In contrast, the blockade of ITS may produce a fragile site leading to chromosomal breakage (Bolzán and Bianchi, 2006). Hence, ITSs may represent possible fission points at which new telomeres can be formed by pre-existing telomeric repeats (Ruiz-Herrera et al., 2008). This conclusion suggests that telomere formation may have occurred at the secondary constriction of chromosome 1 in the lineage of L. reevesii rubritaeniata and L. boehmei. Comparison of the karyotypes of L. reevesii rubritaeniata and L. boehmei indicated that the macrochromosomal features were identical and conserved throughout the suborder Iguania (Olmo and Signorino, 2005).

Thus, the evidence of comparative mapping and the location of 18S-28S rRNA genes and ITS might also verify the process of their transposition to different chromosomes in Leiolepis and Iguania. However, no ITS was found in chromosome 1 of L. b. belliana. In equids, ITS signals have been observed on chromosome 1 of Equus quagga burchelli, but are absent from the chromosomes of other equids. The absence of ITSs on chromosome 1 of L. b. belliana could be the result of a low number of copies of (TTAGGG)n, making it impossible to detect the sequence, or may represent a gradual loss of the repeat sequences during chromosomal evolution (Santini et al., 2002). Further molecular cytogenetic characterizations of other Leiolepis and Uromastyx species are required to clarify the possible location of (TTAGGG)n sequences in Leiolepidinae and Iguania.

Acknowledgments

We thank Mr. Nonn Panitvong, Miss Sirinrat Wannapinpong, Mr. Kriangsak and Mrs. Komkhum Srikulnath for providing the butterfly lizard specimens. The University Development Commission, Ministry of Education, Thailand provided by a PhD scholarship. This work was supported by a Grant-in-Aid for Scientific Research (no. 16086201) from the Ministry of Education, Culture, Sports, Science and Technology, Japan.

Internet Resources

Olmo E and Signorino G (2005) Chromorep: A reptiles chromosomes database, http://193.206.118.100/professori/chromorep.pdf (February 8, 2011).

Uetz P (2011) The TIGR reptile database. The EMBL reptile data-base, http://www.reptile-database.org/ (February 8, 2011).

Received: March 16, 2011; Accepted: April 29, 2011.

Associate Editor: Yatiyo Yonenaga-Yassuda

License information: This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.

• Bolzán AD and Bianchi MS (2006) Telomeres, interstitial telomeric repeat sequences, and chromosomal aberrations. Mutat Res 612:189-214.
• Darevsky IS and Kupriyanoya LA (1993) Two new all female lizard species of the genus Leiolepis Cuvier, 1829 from Thailand and Vietnam. Herpetozoa 6:3-20.
• Go Y, Rakotoarisoa G, Kawamoto Y, Randrianjafy A, Koyama N and Hirai H (2000) PRINS analysis of the telomeric sequence in seven lemurs. Chromosome Res 8:57-65.
• Imai HT, Matsuda Y, Shiroishi T and Moriwaki K (1981) High frequency of X-Y chromosome dissociation in primary spermatocytes of F1 hybrids between Japanese wild mice (Mus musculus molossinus) and inbred laboratory mice. Cytogenet Cell Genet 29:166-175.
• Kasahara S, Yonenaga-Yassuda Y and Rodrigues MT (1987) Karyotype and evolution of the Tropidurus nanuzae species group (Sauria, Iguanidae). Rev Bras Genet 2:185-197.
• Matsuda Y and Chapman VM (1995) Application of fluorescence in situ hybridization in genome analysis of the mouse. Electrophoresis 16:261-272.
• Meyne J, Baker RJ, Hobart HH, Hsu TC, Ryder OA, Ward OG, Wiley JE, Wurster-Hill DH, Yates TL and Moyzis RK (1990) Distribution of non-telomeric sites of the (TTAGGG)n telomeric sequences in vertebrate chromosomes. Chromosoma 99:3-10.
• Nanda I, Schrama D, Feichtinger W, Haaf T, Schartl M and Schmid M (2002) Distribution of telomeric (TTAGGG)n sequences in avian chromosomes. Chromosoma 111:215-227.
• Pendás AM, Morán P, Freije JP and Garcia-Vásquez E (1994) Chromosomal location and nucleotide sequence of two tandem repeats of Atlantic salmon 5S rDNA. Cytogenet Cell Genet 67:31-36.
• Pellegrino KCM, Rodrigues MT and Yonenaga-Yassuda Y (1999) Chromosomal evolution in the Brazilian lizards of genus Leposoma (Squamata, Gymnophthalmidae) from Amazon and Atlantic rain forests: Banding patterns and FISH of telomeric sequences. Hereditas 131:15-21.
• Peters VG (1971) Die intragenerischen Gruppen und die Phylogenese der Schmetterlingsagamen (Agamidae, Leiolepis). Zool Jahrb Syst 98:11-152.
• Porter C, Hamilton MJ, Sites Jr JW and Baker RJ (1991) Location of ribosomal DNA in chromosomes of squamate reptiles: Systematic and evolutionary implications. Herpetologica 47:271-280.
• Ruiz-Herrera A, Nergadze SG, Santagostino M and Giulotto E (2008) Telomeric repeats far from the ends: Mechanisms of origin and role in evolution. Cytogenet Genome Res 122:219-228.
• Santini A, Raudsepp T and Chowdhary BP (2002) Interstitial telomeric sites and NORs in Hartmann's zebra (Equus zebra hartmannae) chromosomes. Chromosome Res 10:527-534.
• Srikulnath K (2010) FISH as a chromosome identification strategy to delineate karyotypic evolution in vertebrates. Thai J Genet 3:120-136.
• Srikulnath K, Matsubara K, Uno Y, Thongpan A, Suputtitada S, Apisitwanich S, Matsuda Y and Nishida C (2009a) Karyological characterization of the butterfly lizard (Leiolepis reevesii rubritaeniata, Agamidae, Squamata) by molecular cytogenetic approach. Cytogenet Genome Res 125:213-223.
• Srikulnath K, Nishida C, Matsubara K, Uno Y, Thongpan A, Suputtitada S, Apisitwanich S and Matsuda Y (2009b) Karyotypic evolution in squamate reptiles: Comparative gene mapping revealed highly conserved linkage homology between the butterfly lizard (Leiolepis reevesii rubritaeniata, Agamidae, Lacertilia) and the Japanese four-striped rat snake (Elaphe quadrivirgata, Colubridae, Serpentes). Chromosome Res 17:975-986.
• Srikulnath K, Matsubara K, Uno Y, Thongpan A, Suputtitada S, Nishida C, Matsuda Y and Apisitwanich S (2010) Genetic relationship of three butterfly lizard species (Leiolepis reevesii rubritaeniata, Leiolepis belliana belliana, Leiolepis boehmei, Agamidae, Squamata) inferred from nuclear gene sequence analyses. Kasetsart J (Nat Sci) 44:424-435.
• Ventura K, Silva MJJ, Fagundes V, Christoff AU and Yonenaga-Yassuda Y (2006) Non-telomeric sites as evidence of chromosomal rearrangement and repetitive (TTAGGG)n arrays in heterochromatic and euchromatic regions in four species of Akodon (Rodentia, Muridae). Cytogenet Genome Res 115:169-175.

Publication Dates

• Publication in this collection
  26 Aug 2011
• Date of issue
  2011

History

• Received
  16 Mar 2011
• Accepted
  29 Apr 2011