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Polymorphisms in methylenetetrahydrofolate reductase and cystathionine beta-synthase in oral cancer - a case-control study in southeastern Brazilians Please cite this article as: Barbosa A, dos Santos M, de Podestá JR, Gouvêa SA, Von Zeidler SV, Louro ID, et al. Polymorphisms in methylenetetrahydrofolate reductase and cystathionine beta-synthase in oral cancer - a case-control study in southeastern Brazilians. Braz J Otorhinolaryngol. 2016;82:558-66.

ABSTRACT

INTRODUCTION:

Oral squamous cell carcinoma (OSCC) is a serious public health problem, due to its high mortality rate and worldwide rising incidence. OSCC susceptibility is mediated by interactions between genetic and environmental factors. Studies suggest that genetic variants encoding enzymes involved in folate metabolism may modulate OSCC risk by altering DNA synthesis/repair and methylation process.

OBJECTIVE:

The goals of this study were to evaluate the association of three genotypic polymorphism (MTHFR C677T, MTHFR A1298C and CBS 844ins68) and oral cancer risk in southeastern Brazilians and evaluate the interactions between polymorphisms and clinical histopathological parameters.

METHODS:

This case-control study included 101 cases and 102 controls in the state of Espírito Santo, Brazil. MTHFR genotyping was done by PCR-RFLP (polymerase chain reaction - restriction fragment length polymorphism) and CBS genotyping by PCR (polymerase chain reaction) analysis.

RESULTS:

MTHFR C677T polymorphism was associated with lymph node involvement. Genotype CT + TT acted as a protective factor. MTHFR A1298C AC + CC genotype was associated with tumor differentiation, and possibly with a better prognosis. In risk analysis, no correlation was observed between genotypes and OSCC.

CONCLUSION:

We concluded that MTHFR C677T, MTHFR A1298C and CBS 844ins68 polymorphisms were not associated with OSCC risk in southeastern Brazilians; however, we suggest a prognosis effect associated with MTHFR C677T and A1298C polymorphisms in OSCC.

Keywords:
Oral squamous cell carcinoma; Methylenetetrahydrofolate reductase; Cystathionine beta-synthase; Genetic polymorphism

Resumo

Introdução:

O carcinoma espinocelular oral (CECO) trata-se de um importante problema de saúde pública, devido à elevada taxa de mortalidade e incidência crescente em todo o mundo. A susceptibilidade ao CECO é mediada por interações entre fatores genéticos e ambientais. Estudos sugerem que as variantes genéticas que codificam as enzimas envolvidas no metabolismo do folato podem modular o risco de CECO, alterando a síntese/reparação do DNA e o processo de metilação.

Objetivo:

Os objetivos deste estudo foram avaliar a associação de três polimorfismos genotípicos (MTHFR C677T, MTHFR A1298C e CBS 844ins68) e o risco de câncer oral em brasileiros da região Sudeste, e avaliar as interações entre polimorfismos e parâmetros clínico-histopatológicos.

Método:

Este estudo de caso-controle incluiu 101 casos e 102 controles no estado do Espírito Santo, Brasil. A genotipagem do polimorfismo MTHFR foi realizada por PCR-RFLP (Reação de Polimerase em Cadeia - Polimorfismo no Comprimento de Fragmento de Restrição) e a do CBS por análise da PCR (Reação de Polimerase em Cadeia).

Resultados:

O polimorfismo MTHFR C677T foi associado ao envolvimento de gânglios linfáticos. O genótipo CT + TT atuou como um fator protetor. O genótipo MTHFR A1298C AC + CC foi associado à diferenciação do tumor e, possivelmente, a um prognóstico melhor. Na análise de risco, a correlação entre os genótipos e o CECO não foi observada.

Conclusão:

Concluímos que os polimorfismos MTHFR C677T, MTHFR A1298C e CBS 844ins68 não estão associados ao risco de CECO nos brasileiros da região Sudeste; no entanto, sugerimos um efeito prognóstico associado aos polimorfismos MTHFR C677T e A1298C em CECO.

PALAVRAS-CHAVE:
CARCINOMA ESPINOCELULAR ORAL; METILENOTETRAHIDROFO-LATO REDUTASE; CISTATIONINA BETA-SINTASE; POLIMORFISMO GENÉTICO

Introduction

Oral squamous cell carcinoma (OSCC) is the eighth most common human cancer worldwide.11 Tsantoulis PK, Kastrinakis NG, Tourvas AD, Laskaris G, Gorgoulis VG. Advances in the biology of oral cancer. Oral Oncol. 2007;43:523-34. In Brazil, nearly 15,290 new cases of oral cancer are expected in 2014, and in the Southeast it is the fourth among men and tenth among women.22 Instituto Nacional de Câncer José Alencar Gomes da Silva. Avail-able from: http://www.inca.gov.br/estimativa/2014 [cited 10.05.14].
http://www.inca.gov.br/estimativa/2014 ...
OSCC is a multifactorial disease, affected by notorious environmental factors such as alcohol and tobacco, as well as genetic factors, of which little is known. Polymorphisms in certain genes may confer susceptibility to OSCC development. Studies have shown a relationship between polymorphisms of genes involved in folate metabolism and OSCC risk due to their influence on methylation, synthesis and DNA repair.3, 4, 5, 6 and 7

MTHFR gene encodes the methylenetetrahydrofolate reductase enzyme, that is important for intracellular folate homeostasis and the irreversible conversion of 5,10-methylenetetrahydrofolate (5,10-MTHF) into 5-methyltetrahydrofolate (5-MTHF). Polymorphisms C677T and A1298C in the MTHFR gene may be associated with oral cancer susceptibility due to changes in catalytic activity. The C677T polymorphism results in an enzyme with 65 percent of the wild-type homozygote activity for heterozygotes and 30 percent for homozygotes of the variant allele. 8 and 9 The MTHFR A1298C polymorphism is localized in the regulatory domain region. 1010 Homberger A, Linnebank M, Winter C, Willenbring H, Marquardt T, Harms E, et al. Genomic structure and transcript variants of the human methylenetetrahydrofolate reductase gene. Eur J Hum Genet. 2000;8:725-9. Homozygous 1298C individuals have approximately the same enzyme activity of those who are heterozygous.1111 Weisberg I, Tran P, Christensen B, Sibani S, Rozen R. A second genetic polymorphism in methylenetetrahydrofolate reductase (MTHFR) associated with decreased enzyme activity. Mol Genet Metab. 1998;64:169-72. Reduced MTHFR enzyme activity increases the availability of folate for the production of thymidylate and purine for DNA synthesis and repair.1212 Choi SW, Mason JB. Folate status: effects on pathways of colorectal carcinogenesis. J Nutr. 2002;132:2413S-8S.

The CBS gene encodes cystathionine beta synthase (CBS), also involved in the folate pathway, which mediates the conversion of homocysteine to cystathionine. CBS 844ins68 polymorphism has been associated with shorter survival time in head and neck squamous cell carcinoma patients. 1313 Galbiatti AL, da Silva LM, Ruiz-Cintra MT, Raposo LS, Maníglia JV, Pavarino EC, et al. Association between 11 genetic polymorphisms in folate-metabolising genes and head and neck cancer risk. Eur J Cancer. 2012;48:1525-31. Therefore, this study aimed to investigate the frequency and association of MTHFR and CBS polymorphisms in oral cancer susceptibility in the population of the state of Espírito Santo, Brazil and its potential impact on the prognostic outcome.

Methods

Samples

In this case-control study, blood samples were collected from 101 patients with conclusive histopathological diagnostic of oral squamous cell carcinoma obtained from the Head and Neck Division of the Hospital Santa Rita de Cássia, Brazil. Of this total, 69 individuals were classified by skin color and other physical traits: 22 as white (Caucasians, mainly Portuguese descendents); 32 as "pardos" (ethnic mixture of Europeans, Africans and Amerindians), and 15 as black (African descendants), based on the official Brazilian census categorization. All patients were residents of the state Espírito Santo (ES, Brazil) and randomly recruited from 2011 to 2013. The inclusion criteria during this study were patients of both genders, over 35 years of age who accepted to participate in the study. The exclusion criteria were patients with SCC in other sites and those who received radiotherapy, chemotherapy, surgery or any other treatment prior to recruitment.

The control group was composed by 102 individuals residing in ES, Brazil, who were referred for clinical assessment and had a negative cancer familial history and did not show pre-malignant or malignant oral lesions at the time of sample collection. The control group was matched by age and gender. As only partial data was available for the controls regarding the habits such smoking and alcohol usage, it was not included for matching with the cases. All subjects provided signed informed consents approved by institutional review boards. This work was previously approved by the local research ethics committee (CEP Protocol n° 318/2011).

Clinicopathological features of patients analyzed were tumor stage (early stage I-II and late stage III-IV), size (T1, T2, T3 and T4), nodal status (positive N+ and negative N0) according to TNM Classification,1414 Sobin LH, Gospodarowicz MK, Wittekind C. TNM classification of malignant tumours. 7th ed. UICC. Wiley-Blackwell Press; 2009. histolopathological grade (well, moderately and poorly differentiated tumors)1515 Barnes L, Eveson JW, Reichart P, Sidransky D. World Health Organization. Classification of tumours. Pathology and genetics of head and neck tumours. Lyon: IARC Press; 2005. and smoking habit. All required information about clinical and histopathological parameters was obtained from medical records. Participants were not classified into ethnic groups or skin color.

Genotyping assays

Genomic DNA was isolated by phenol-chloroform extraction. The MTHFR C677T and MTHFR A1298C polymorphisms were genotyped by the PCR-RFLP (polymerase chain reaction - restriction fragment length polymorphism) method, as previously described. 8 and 11 All reactions included positive and negative controls. Approximately 20 percent of the samples were randomly selected to repeat the genotyping procedure. The reproducibility was 100 percent.

The C ? T transition creates a restriction site for the enzyme Hinf I. PCR product (198 bp) was digested using Hinf1 and visualized by electrophoresis in 8 percent polyacrylamide gels and silver nitrate staining. PCR products included a single 198 bp fragment for wild-type homozygotes (CC); 198 bp, 175 bp and 23 bp fragments for heterozygote (CT), and 175 and 23 bp for mutant homozygote (TT).

The MTHFR 1298AC polymorphism eliminates the MboII restriction site.

Wild genotype (AA) produced five fragments of 56, 31, 30, 28 and 18 bp, whereas heterozygous (AC) yielded six fragments of 84, 56, 31, 30, 28 and 18 bp, and homozygous mutants (CC) produced four fragments of 84, 31, 30 and 18 bp.

CBS 844ins68 polymorphisms were characterized by differential size separation after PCR, as previously described. 1616 Dutta S, Sinha S, Chattopadhyay A, Gangopadhyay PK, Mukhopadhyay J, Singh M, et al. Cystathionine beta-synthase T833C/844INS68 polymorphism: a family-based study on mentally retarded children. Behav Brain Funct. 2005;26:1-25. The polymorphic allele results from the insertion of 68 bp at exon 8. The major allele (I) presented a 239 bp fragment, and the normal allele (N) presented a 171 bp fragment.

Statistical analysis

Genotypic frequencies were tested for Hardy-Weinberg equilibrium (HWE). The chi-square and Fisher exact tests were used for association analysis, and confirmation was obtained by the Lilliefors test (significance considered when p < 0.05). Multivariate logistic regression was used to obtain odds ratio (OR) and confidence intervals (95% CI). Statistical calculations were performed using the Epi InfoH v 3.4.3, 2007 software. Linkage disequilibrium (LD) and halotype analysis were conducted by Haploview software.

Results

Characteristics of 101 oral cancer patients and 102 controls are shown in Table 1. Significant differences between groups were not observed (p > 0.05).

Table 1
Clinical characteristics of cancer patients and control subjects.

Genotype frequencies for MTHFR C677T, A1298C and CBS 844ins68 in controls and oral cancer patients are shown in Table 2.

Table 2
Distribution of MTHFR and CBS genotypes among oral cancer patients and control groups.

Genotype distribution of the three genetic polymorphisms was not significantly different between oral cancer and control group (p > 0.05) (Table 2). MTHFR C677T, A1298C and CBS 844ins68 allele frequencies in controls and oral cancer patients are shown in Table 3. All tested polymorphisms are in the HWE.

Table 3
Distribution of MTHFR and CBS alleles among the oral cancer patients and control groups.

Haplo View software was used for conducted LD and haplotype analysis on alleles of MTHFR C677T and A1298C polymorphisms ( Table 4). We found that there was no difference for the haplotypes in the two groups (p > 0.05), which suggested that the haplotypes do not increase the risk of cancer.

Table 4
Linkage disequilibrium and haplotype analysis for alleles of C677T and A1298C polymorphisms.

Patients were evaluated by ethnicity, but a prevalence of polymorphic allele in ethnic groups was not observed. The prevalence of the C allele (MTHFR C677T polymorphism) was higher in the three ethnic groups (white - 63.6 percent; black - 73.3 percent, and "pardos" - 82.8 percent). For the MTHFR A1298C polymorphism, the A allele predominated in all ethnic groups (white - 72.7 percent; black - 83.3 percent, and "pardos" - 76.6 percent), and finally, the presence of the wild-type allele for CBS 844ins68 polymorphism was also more prevalent in all ethnic groups (white - 86.4 percent; black - 86.7 percent, and "pardos" - 89.1 percent). These data demonstrate the ample mixture of races in the case group.

Interaction between genotypes and clinicopathological features was further analyzed (Table 5 and Table 6). MTHFR C677T polymorphism is associated with positive lymph nodes, and the combination of CT + TT genotypes acts as a protective factor. Multivariate analysis (95% CI) considering tumor size revealed that the combination of CT + TT genotypes generates a risk of lymph node metastasis three times smaller than the CC genotype (p = 0.012) (Table 7).

Table 5
Clinicopathological characteristics of patients with OSCC and relation with the MTHFR polymorphisms studied.
Table 6
Clinicopathological characteristics of patients with OSCC and relation with the CBS polymorphism studied.
Table 7
Multivariate analysis of the nodal status, according to tumor size and MTHFR C677T polymorphism.

We observed that the A1298C polymorphism is related to tumor differentiation. AC + CC genotypes were more frequent in well-differentiated tumors, whereas the AA genotype was more frequent in moderately or poorly differentiated tumors (p = 0.007) (Table 5).

There was no statistically significant association between CBS 844ins68 polymorphism and analyzed variables ( Table 6).

Discussion

Folate deficiency has been associated with diseases such as cancer. Therefore, the role of genetic polymorphisms of folate metabolism enzymes has been investigated in several cancer types.17 and 18 Among these enzymes, we investigated MTHFR and CBS in OSCC.

Our study has reported for the first time the association between lymph node metastasis and MTHFR C677T polymorphism combination CT + TT, acting as a protective factor (p = 0.022). Furthermore, other studies have suggested a better prognosis for oral cancer patients with CT or TT genotypes. Tsai et al.1919 Tsai CW, Hsu CF, Tsai MH, Tsou YA, Hua CH, Chang WS, et al. Methylenetetrahydrofolate reductase (MTHFR) genotype, smoking habit, metastasis and oral cancer in Taiwan. Anticancer Res. 2011;31:2395-9. showed that 677CT + TT patients had a lower risk of metastasis compared with those with CC, and Sailasree et al.2020 Sailasree R, Nalinakumari KR, Sebastian P, Kannan S. Influence of methylenetetrahydrofolate reductase polymorphisms in oral cancer patients. J Oral Pathol Med. 2011;40:61-6. showed improved survival.

The protective effect could be due to its decreased efficiency for DNA methylation.2121 Paz MF, Avila S, Fraga MF, Pollan M, Capella G, Peinado MA, et al. Germ-line variants in methyl-group metabolism genes and susceptibility to DNA methylation in normal tissues and human primary tumors. Cancer Res. 2002;62:4519-24.MTHFR converts 5,10-MTHF to 5-MTHF. The 5,10-MTHF is used for conversion of dUMP to dTMP, whereas 5-MTHF is the methyl donor for synthesis of methionine and S-adenosylmethionine in methylation reactions. 2222 Slattery ML, Potter JD, Samowitz W, Schaffer D, Leppert M. Methylenetetrahydrofolate reductase, diet, and risk of colon cancer. Cancer Epidemiol Biomarkers Prev. 1999;8:513-8. Individuals with MTHFR 677TT and MTHFR 677CT genotypes show enzymes with decreased activity, 88 Frosst P, Blom HJ, Milos P, Goyette P, Sheppard CA, Matthews RG, et al. A candidate genetic risk factor for vascular disease: a common mutation in methylenetetrahydrofolate reductase. Nat Genet. 1995;10:111-3. hence they tend to accumulate 5,10-MTHF causing a change in the pathway, leading to lowering of DNA methylation.2121 Paz MF, Avila S, Fraga MF, Pollan M, Capella G, Peinado MA, et al. Germ-line variants in methyl-group metabolism genes and susceptibility to DNA methylation in normal tissues and human primary tumors. Cancer Res. 2002;62:4519-24. A low level of genomic DNA methylation could decrease the chance of promoter hypermethylation in cancer-related genes and lead to fewer mutations by spontaneous deamination of 5-methylcytosine (5mC). Hypermethylation favors cancer initiation and progression by silencing tumor suppressor genes or DNA repair genes.2323 Sharma S, Kelly TK, Jones PA. Epigenetics in cancer. Carcinogenesis. 2010;31:27-36. Most mutations found in cancers are C ? T transitions at CG:CG sequences, due to high frequencies of spontaneous deamination of 5 mC. 24 and 25 Lack of cytosine methylation could prevent C ? T mutations.

In addition, the MTHFR A1298C polymorphism was associated with tumor differentiation. AC + CC genotypes were more frequent in well-differentiated tumors (p = 0.007), which may also be associated with a better prognosis, while the AA genotype had a higher frequency in moderately or poorly differentiated tumors. Although the prognostic value of the histological grade is controversial in OSCC, some studies have suggested that poorly differentiated carcinomas tend to metastasize and are associated with decreased survival rates.2626 Kademani D, Bell RB, Bagheri S, Holmgren E, Dierks E, Potter B, et al. Prognostic factors in intraoral squamous cell carcinoma: the influence of histologic grade. J Oral Maxillofac Surg. 2005;63:1599-605. However, there is no consensus in the literature about whether histological tumor grading is a good isolated parameter of prognosis value. Tumor histopathological grade, together with additional prognostic factors and TNM staging might provide better support for treatment decision.

However, in this study with a southeastern Brazilian population, we did not observe association between MTHFR C677T, MTHFR A1298C and CBS 844ins68 polymorphisms and oral cancer susceptibility. Some studies have also found a non-significant reduced risk for MTHFR 677TT genotype in oral cancer. 27 and 28 In contrast, Sailasree et al.2020 Sailasree R, Nalinakumari KR, Sebastian P, Kannan S. Influence of methylenetetrahydrofolate reductase polymorphisms in oral cancer patients. J Oral Pathol Med. 2011;40:61-6. had found that C677T was associated with predisposition to oral cancer with a significant reduced risk for CT + TT genotype individuals. Meta-analysis studies 29 and 30 have shown a marginal association or no associations of MTHFR C677T polymorphism with oral cancer risk. The conflicting results regarding the associations between MTHFR C677T polymorphisms and risks for OSCC may be due to different ethnicities, subtypes and regional dietary and local carcinogens' exposure.

For A1298C polymorphism, some studies agree with our results, including a meta-analysis study19, 20 and 31 showing a lack of association with oral cancer risk. However, meta-analysis demonstrated that C allele has a possible preventive role for oral cancer.2929 Zhuo X, Ling J, Zhou Y, Zhao H, Song Y, Tan Y. Polymorphisms of MTHFR C677T and A1298C association with oral carcinoma risk: a meta-analysis. Cancer Invest. 2012;30:447-52.

In our study, the CBS 68 bp insertion allele (I) was neither associated with OSCC risk nor with heterozygous genotype (I/N) or polymorphic homozygous genotype (I/I), corroborating the results of Galbiatti et al.,3232 Galbiatti AL, Ruiz MT, Raposo LS, Maniglia JV, Pavarino-Bertelli EC, Goloni-Bertollo EM. The association between CBS 844ins68 polymorphism and head and neck squamous cell carcinoma risk - a case-control analysis. Arch Med Sci. 2010;6:772-9. but unlike results for other tumor types such as prostate and upper gastrointestinal tract cancers.33 and 34

MTHFR C677T polymorphism genotype prevalence varies to a great extent among different human populations. In Indians, the frequency of TT genotype is below 1 percent, 2020 Sailasree R, Nalinakumari KR, Sebastian P, Kannan S. Influence of methylenetetrahydrofolate reductase polymorphisms in oral cancer patients. J Oral Pathol Med. 2011;40:61-6. whereas among Mexicans, it is above 30 percent; the TT genotype in our controls showed a 10.8 percent frequency, which is comparable to previous reports from Chinese and Puerto Rican populations, 27, 35, 36 and 37 and also in regions of Brazil. 38, 39 and 40 The frequencies of TT genotype demonstrated in studies with populations in southeastern Brazil range from 4.4 percent to 14 percent in the state of São Paulo. 39, 41 and 42 Control prevalence of variant MTHFR A1298C genotypes (CC) in our study was 4.9 percent, in agreement with studies in northeastern Brazil and also in other populations of the world, such as Chinese, Japanese, Polish, Italian and Americans 19, 43, 44, 45, 46, 47 and 48; however, there was little difference from frequencies observed in the state of São Paulo, with frequencies of 6.1 percent and 8.8 percent. 41 and 42

In our study, the CBS 68 bp insertion allele (I) was found in 7.8 percent of the control population. A similar frequency (7%) was observed in the Pakistani population4949 Yakub M, Moti N, Parveen S, Chaudhry B, Azam I, Iqbal MP. Polymorphisms in MTHFR, MS and CBS genes and homocysteine levels in a Pakistani population. PLoS ONE. 2012;7:e33222.; however, the allelic frequency was higher in another study conducted in São Paulo, Brazil.3232 Galbiatti AL, Ruiz MT, Raposo LS, Maniglia JV, Pavarino-Bertelli EC, Goloni-Bertollo EM. The association between CBS 844ins68 polymorphism and head and neck squamous cell carcinoma risk - a case-control analysis. Arch Med Sci. 2010;6:772-9. As found in another study,3232 Galbiatti AL, Ruiz MT, Raposo LS, Maniglia JV, Pavarino-Bertelli EC, Goloni-Bertollo EM. The association between CBS 844ins68 polymorphism and head and neck squamous cell carcinoma risk - a case-control analysis. Arch Med Sci. 2010;6:772-9.CBS 844ins68 polymorphism was not associated with clinical or histopathological features in our study.

Conclusion

In conclusion, MTHFR C677T CT and TT genotypes were associated with lymph node involvement, acting as a protective factor in OSCC, and the MTHFR A1298C AC + CC genotype was associated with tumor differentiation, which may be associated with a better prognosis. However, the results need to be confirmed in larger studies of patients and controls matched by smoking habit.

Acknowledgments

ABS was sponsored by a CAPES scholarship. We thank the Head and Neck Division of the Santa Rita de Cássia Hospital, ES, Brazil for helping with sample collection.

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  • Please cite this article as: Barbosa A, dos Santos M, de Podestá JR, Gouvêa SA, Von Zeidler SV, Louro ID, et al. Polymorphisms in methylenetetrahydrofolate reductase and cystathionine beta-synthase in oral cancer - a case-control study in southeastern Brazilians. Braz J Otorhinolaryngol. 2016;82:558-66.

Publication Dates

  • Publication in this collection
    Sep-Oct 2016

History

  • Received
    01 Apr 2015
  • Accepted
    02 Oct 2015
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