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Genetic parameters considering traits of importance for cassava biofortification

Abstract

Twenty six sweet cassava clones were evaluated in two agricultural years, in randomized block design, with 3 replications and plots with 25 plants. The harvests were at 12 months after planting, in both years. The traits evaluated were root yield (RY), dry matter content (DMC), total carotenoids content (TC), β-carotene content (BC), trans-β-carotene content (TrBC) and total cyanide content (TCy). Genotype was significant (P<0.05) in all traits. Broad-sense heritability estimates at the plot level (hmg2 ) ranged from 77% (RY) to 93% (TC and TrBC), while the accuracy ranged from 0.88 (RY) to 0.96 (BC and TrBC). The genetic correlations among TC, BC and TrBC were high (0.96 to 0.99) and significant, and the genetic correlations involving these traits and TCy were negative. These results demonstrate the existence of great genetic variability in characteristics important to cassava biofortification and, consequently, great perspectives in the breeding for this purpose.

Keywords:
Mixed models; carotenoids; beta-carotene; sweet cassava; Manihot esculenta

INTRODUCTION

Cassava is a crop whose main product are the starch-rich roots, being one of the main sources of dietary energy in many tropical countries (Ceballos et al. 2015Ceballos H, Kawuki RS, Gracen VE, Yencho GC, Hershey CH2015 Conventional breeding, marker-assisted selection, genomic selection and inbreeding in clonally propagated crops: a case study for cassava. Theoretical and Applied Genetics 128:1647-1667, Ceballos et al. 2020Ceballos H, Rojanaridpiched C, Phumichai C, Becerra LA, Kittipadakul P, Iglesias C, Gracen VE2020 Excellence in cassava breeding: perspectives for the future. Crop Breeding, Genetics and Genomics 2:e200008). The pulp color of cassava roots can be white, yellow, orange or cream (Ayetigbo et al. 2018Ayetigbo O, Latif S, Abass A, Joachim M2018 Comparing characteristics of root, flour and starch of biofortified yellow-flesh and white-flesh cassava variants, and sustainability considerations: A review. Sustainability 10:3089), and there is a close relation between the pulp color and the carotenoid content in this crop (Sánchez et al. 2014Sánchez T, Ceballos H, Dufour D, Ortiz D, Morante N, Calle F, Zum Felde T, Domínguez M, Davrieux F2014 Prediction of carotenoids, cyanide and dry matter contents in fresh cassava root using NIRS and Hunter color techniques. Food Chemistry 151:444-451). Carotenoids may be precursors of vitamin A (Mezzomo and Ferreira 2016Mezzomo N, Ferreira SR2016 Carotenoids functionality, sources, and processing by supercritical technology: a review. Journal of Chemistry 7:1-16), which when at deficiency levels in humans causes several problems including permanent blindness (Stevens et al. 2015Stevens GA, Bennett JE, Hennocq Q, Lu Y, De-Regil LM, Rogers L, Danaei G, Li G, White RA, Flaxman SR, Oehrle S-P, Finucane MM, Guerrero R, Bhutta ZA, Then-Paulino A, Fawzi W, Black RE, Ezzati M2015 Trends and mortality effects of vitamin A deficiency in children in 138 low-income and middle-income countries between 1991 and 2013: a pooled analysis of population-based surveys. The Lancet Global Health 3:e528). One of the carotenoids linked to vitamin A activity in humans is β-carotene (Moura et al. 2015Moura FF, Miloff A, Boy E2015 Retention of provitamin A carotenoids in staple crops targeted for biofortification in Africa: cassava, maize and sweet potato. Critical Reviews in Food Science and Nutrition 55:1246-1269).

Biofortification is the process by which the nutritional quality of the main crops is improved through breeding, a feasible and inexpensive means of providing access to better foods to poorer populations (Bouis and Saltzman 2017Bouis HE, Saltzman A2017 Improving nutrition through biofortification: a review of evidence from HarvestPlus, 2003 through 2016. Global Food Security 12:49-58, Garg et al. 2018Garg M, Sharma N, Sharma S, Kapoo P, Kumar A, Chunduri V, Arora P2018 Biofortified crops generated by breeding, agronomy, and transgenic approaches are improving lives of millions of people around the world. Frontiers in Nutrition 5:12). There are several obstacles to cassava breeding, such as the heterozygosity (which hinders the identification of superior individuals), difficulties of some genotypes in flowering, and the low propagation rate (Ceballos et al. 2020Ceballos H, Rojanaridpiched C, Phumichai C, Becerra LA, Kittipadakul P, Iglesias C, Gracen VE2020 Excellence in cassava breeding: perspectives for the future. Crop Breeding, Genetics and Genomics 2:e200008). These difficulties require the use of techniques that increase the probability of selecting genetically superior individuals in this crop.

Variance components and genetic values are essential parameters in breeding programs, and the Restricted Maximum Likelihood/Best Linear Unbiased Prediction (REML/BLUP) is the standard procedure for obtaining such parameters in several species (Resende 2016Resende MDV2016 Software Selegen-REM/BLUP: a useful tool for plant breeding. Crop Breeding and Applied Biotechnology 16:330-339). The main advantages of REML/BLUP are: i) it allows the comparison of individuals or varieties throughout time (generations, years) or in different locations (locations, blocks); ii) it allows dealing with complex structured data (repeated measurements, different years, places and experimental designs); iii) and it can be applied to unbalanced data and non-orthogonal designs. REML/BLUP enables a more precise prediction of genetic values and estimation of genetic parameters, as heritabilities and genetic correlations (Resende 2007Resende MDV2007 SELEGEN-REML/BLUP: Sistema estatístico e seleção genética computadorizada via modelos lineares mistos. Embrapa Florestas, Colombo , 360p). BLUP maximizes the correlation between true and predicted genotypic values (Piepho et al. 2008Piepho HP, Möhring J, Melchinger AE, Büchse A2008 BLUP for phenotypic selection in plant breeding and variety testing. Euphytica 161:209-228). This work aimed to estimate genetic parameters based on traits of importance in the context of cassava biofortification, using the mixed model procedure.

MATERIAL AND METHODS

Characterization of the experimental area

The work was carried out in the experimental field of Embrapa Cassava & Fruits, in Cruz das Almas, state of Bahia, Brazil, located at lat 12° 39' 11'' S, long 39° 7' 19'' W, alt 199 m asl, with a temperature of 24.5 °C, relative humidity of 80% and average annual rainfall of 1200 mm. The soil was classified as Latossolo Amarelo Distrocoeso Argissólico (Oxisol), according to Santos et al. (2018Santos HG, Jacomine PKT, Anjos LHC, Oliveira VA, Lumbreras JF, Coelho MR, Almeida JA, Araújo Filho JC, Oliveira JB, Cunha TJF2018 Sistema brasileiro de classificação de solos. Embrapa, Brasília, 356p).

Soil preparation consisted of plowing followed by two harrowings. Fertilization was performed based on soil analysis, applying phosphorus (60 kg ha-1 of P2O5) and potassium (40 kg ha-1 of K2O) at planting, and nitrogen (30 kg ha-1 of N) at 50 days after planting. Weeding was carried out during the crop cycle, to always keep the experiment clean.

Genotypes and field evaluations

The 26 clones assessed in this study came from an initial group of 224 clones and belong to 12 families of full sibs, resulting from crosses among accessions from the Cassava Active Germplasm Bank at Embrapa Cassava & Fruits (Table 1). These accessions were crossed due to their yellow pulp roots. Crosses and handling of the seeds were done according to Freitas et al. (2018Freitas JPX, Diniz RP, Santos VS, Oliveira EJ2018 Genetic parameters and selection gains in early clonal evaluation trials: implications for cassava breeding. Euphytica 214:1-16). The 224 clones were assessed for root pulp color (yellow), according to Sánchez et al. (2006Sánchez T, Chávez AL, Ceballos H, Rodriguez‐Amaya DB, Nestel P, Ishitani M2006 Reduction or delay of post‐harvest physiological deterioration in cassava roots with higher carotenoid content. Journal of the Science of Food and Agriculture 86:634-639), and 26 with more intense yellow were selected. Later, these 26 clones were evaluated in two agricultural years.

Table 1
Genealogy of 26 clones assessed in this study

The design adopted in both years consisted of randomized blocks, with 3 replications and plots of 25 plants spaced 1.0 m x 0.60 m. Both harvests were carried out at 12 months after planting. After harvesting, the roots were separated from the shoot and weighed using a digital scale (Brecknell ElectroSamson 45 kg x 0.01 kg, Fairmont, Minnesota, USA), obtaining the root yield (RY; t ha-1), and five roots separated from each plot were used for the analyses of carotenoids, cyanogenic glycoside and dry matter.

Laboratory analyses

Root preparation

The selected roots were washed, dried, peeled and divided into four parts through two longitudinal cuts. Two opposite quarters were used for carotenoid and dry matter analysis and the other opposite sides for cyanogenic compounds. The samples were grated using a stainless-steel food processor for extraction and homogenized in a vertical mixer to obtain a homogenous mass.

Determination of carotenoids

The quantification of total carotenoids and β-carotene was performed according to Rodriguez-Amaya and Kimura (2004Rodriguez-Amaya DB, Kimura M2004 HarvestPlus handbook for carotenoid analysis. IFPRI:CIAT, Cali , 58p). A portion (5 to 10 g depending on the pulp color) was homogenized for 1 min with 30 mL of acetone with a Polytron homogenizer (Ultra Turrax IKA T18 digital, Staufen, Germany) and then filtered under vacuum (Vacuum Pump Prismatec 121, Itu, Brazil). The carotenoid solution was made up to volume with petroleum ether and the absorbance was taken at 450 nm (Spectrophotometer Thermo Scientific Genesys 10S UV-Vis, Shanghai, China). The total carotenoid content was calculated using the following formula:

Total carotenoid content (TC; μg g-1) = A x sample volumemLx104A1cm1%x sample weight (g)

where A = absorbance, sample volume = volumetric flask (mL), and = 2592 (β-carotene extinction coefficient in petroleum ether).

Aliquots (5 or 10 mL) of the petroleum ether solution used for quantification of TC were taken for the quantification of total β-carotene (BC; μg g-1) and trans-β-carotene (TrBC; μg g-1), with a high-performance liquid chromatography (HPLC Waters Alliance 2695, Milford, USA) equipped with quaternary pump, autosampler, in-line degasser, UV / visible photodiode array detector between 350 and 600 nm and the C30 column (Waters YCM carotenoid S-3, 4.6 x 250 mm, reverse) controlled by Empower software.

The concentration of β-carotene and its isomer trans was determined with the following formula: β-carotene (BC) or trans-β-carotene (TrBC) (μgg-1) = AxxCsμgmL-1x V(mL)Asx P(g)

where Ax = carotenoid peak area, Cs = standard concentration, As = standard area, V = total extract volume, and P = sample weight.

Total cyanide content

This analysis was performed according to Essers (1994Essers AJA1994 Further improving the enzymic assay for cyanogens in cassava products. Acta Horticulturae 375:97-104). Approximately 60 g of the homogeneous solution was transferred to a Büchner funnel coupled to a 500 mL Buchner flask and filtered under vacuum. The extract was analyzed for cyanogenic compounds after appropriate dilution, by hydrolysis with exogenous linamarase prepared in the lab from cassava cortex extraction (Cooke 1979Cooke RD1979 Enzymatic assay for determining the cyanide content of cassava and cassava products. CIAT, Cali, 14p), and after 10 minutes at room temperature the absorbance was recorded at 605 nm on a spectrophotometer (Thermo Scientific Genesys 10S UV-Vis Spectrophotometer, Shanghai, China). The total cyanide content (TCy) is expressed as μg HCN g-1 fresh weight.

Dry matter content

Dry matter content (DMC; %) was determined with the oven drying method (Ige et al. 2022Ige AD, Olasanmi B, Bauchet GJ, Kayondo IS, Mbanjo EGN, Uwugiaren R, Motomura-Wages S, Norton J, Egesi C, Parkes EY, Kulakow P, Ceballos H, Dieng I, Rabbi IY2022 Validation of KASP-SNP markers in cassava germplasm for marker-assisted selection of increased carotenoid content and dry matter content. Frontiers in Plant Science 13:01-17). The moisture from the roots (sample of 100 g) was obtained after drying in forced air circulation oven (Dehydrator Pardal PE60, Petrópolis, Brazil) at 60 °C to constant weight. Dry matter content was expressed as the percentage of dry weight relative to fresh weight.

Statistical analysis

Data on root yield (RY, t ha-1), total carotenoids content (TC, µg g-1), β-carotene content (BC, µg g-1), trans-β-carotene content (TrBC, µg g-1), total cyanide content (TCy, µg g-1) and dry matter content (DMC, %) were analyzed by mixed models (Henderson 1974Henderson CR1974 General flexibility of linear model techniques for sire evaluation. Journal of Dairy Science 57:963-972) with fixed effects estimation via BLUE (best linear unbiased estimation), prediction of random effects via BLUP (best linear unbiased prediction) and estimation of variance components via REML (restricted maximum likelihood). Statistical analysis was performed using Selegen-REML/BLUP software (Resende 2016Resende MDV2016 Software Selegen-REM/BLUP: a useful tool for plant breeding. Crop Breeding and Applied Biotechnology 16:330-339), model 54. The following matrix model was used for such analysis, considering each characteristic individually:

y =Xr+Zg+Wi+ e where:

y: vector of phenotypic observations at the plot level for each trait evaluated.

r: vector of the fixed effects of replicates added to the overall mean in each year (replicate-year combination).

g: vector of the random effects of clones, g ~N(0, Iσg2 ).

i: vector of the random effects of clones x years interaction, i ~N(0, Iσi2) ;

e: vector of random residuals, e ~N(0, Iσe2) ;

X , Z and W: incidence matrices (0 and 1) of said effects.

σg2 , σi2 and σe2: genotypic, clones x years and residual variances, respectively.

To test the random effects of the model (clones and clones x years interaction) nested models were built, that is, a full model and a reduced model without the effect to be tested. With the logarithm of the maximum of the residual likelihood function (L) in hand, the deviances (D = -2 log L) for the full and reduced models were calculated. The difference between the deviances of the reduced and full models allows obtaining the likelihood ratio (LR = Dreduced - Dfull), which follows a chi-square distribution. Thus, the test of this ratio, known as likelihood ratio test (LRT), is performed using the chi-square statistic with 1 degree of freedom for each effect under test, at the 5% level.

The selection accuracy was estimated by the expression rg^g=1-PEV-σg2 , where PEV- ̅ is the variance of the mean prediction error of the genotypic BLUP. Broad-sense heritability, at the plot level, was calculated by the ratio hg2=σg2σg2+σi2+σe2 . Broad-sense heritability, at the level of genotype means, was calculated by the ratio hmg2=σg2σg2+σi2r+σe2re , where r and e are the numbers of replicates and environments (years), respectively. The residual and genotypic coefficients of variation were calculated by the ratio between the standard deviation and the corresponding overall phenotypic mean ( CV% =σy- 100).

From the predicted genotypic values, free from the interaction effect, and the observed phenotypic values, the Pearson correlations between each pair of traits were calculated. For this we used the data of all the 26 clones. The significance of genotypic correlations was tested via bootstrap with 1000 resamplings, in order to construct the distribution of correlations for each trait, at a level of 5%, using the bootstrap package of R software (R Core Team 2022R Core Team2022 R: A language and environment for statistical computing. R Foundation for Statistical Computing. Available at <Available at https://www.R-project.org />. Accessed on May 20, 2022.
https://www.R-project.org...
).

RESULTS AND DISCUSSION

Deviance analysis

The effect of clones is significant for all traits (Table 2). Consequently, the variance components, as the heritability estimates, are significantly different from zero. The significance (P<0.05) of the clones x years interaction in BC is attenuated by the very high and significant genetic correlation (0.99) between BC and TC (Table 4) and the high estimate of hmg2 (93%) of TC (Table 3), which guarantees that the selection on TC will result in increase in BC.

Table 2
Quantile of Likelihood Radio Test (LRT) for random effect model
Table 3
Estimates for residual coefficient of variation (CVe), genotypic coefficient of variation (CVg), CVg/CVe ratio (b), genotypic variance ( σg2 ), heritability at plot level ( hg2 ), heritability at genotypic means level ( hmg2 ), genotype selection accuracy, and phenotypic means (for the two years), for sweet cassava genotypic evaluation
Table 4
Phenotypic (above the diagonal) and genotypic (under the diagonal) correlations

Variance components

According to Vencovsky (1987Vencovsky R1987 Herança quantitativa. In Paterniani E and Viégas GP (eds) Melhoramento e produção do milho. Fundação Cargill, Campinas, p. 137-214), an interesting way to evaluate experimental precision is to obtain the ratio between genetic (CVg) and experimental (CVe) coefficients of variation ( b=CVgCVe ). The b values ​​are greater than 1 in all the traits (Table 3), showing that the genetic variance is higher than the environmental variance (Vilela et al. 2022Vilela MS, Peixoto JR, Ramos SDR, Sousa RMD, Oliveira AP, Toscano MAF, Oliveira Junior AA2022 Agronomic assessment of 32 sour passionfruit genotypes in federal district. Bioscience Journal 38:e38004), a favorable situation to the selection.

The heritability estimates of RY, DMC and TCy, based on plots ( hg2 ), were around 50%, while those related to carotenoids ranged from 72% (TC and BC) to 75% (TrBC). As expected, heritability estimates based on clone means ( hmg2 ) were higher than those of hg2 , ranging from 77% (RY) to 93% (TC and TrBC). This is understandable, since the phenotypic variance is smaller in hmg2 (Schmidt et al. 2019Schmidt P, Hartung J, Bennewitz J, Piepho HP2019 Heritability in plant breeding on a genotype-difference basis. Genetics 212:991-1008).

The highest heritabilities of TC, BC and TrBC indicate that selection to increase carotenoid levels in cassava can start in the initial phases of the program. Heritability estimates in literature for TC vary from 60.58% (Parkes et al. 2020Parkes E, Aina O, Kingsley A, Iluebbey P, Bakare M, Agbona A, Akpotuzor P, Labuschagne M, Kulakow P2020 Combining ability and genetic components of yield characteristics, dry matter content, and total carotenoids in provitamin A cassava F1 cross-progeny. Agronomy 10:1850) to 99.2% (Nduwumuremyi et al. 2018Nduwumuremyi A, Melis R, Shanahan P, Theodore A2018 Analysis of phenotypic variability for yield and quality traits within a collection of cassava (Manihot esculenta) genotypes. South African Journal of Plant and Soil 35:199-206). These high estimates support the fact that carotenoid content in cassava roots is controlled only by two genes (Chavez et al. 2000Chavez AL, Bedoya JM, Sánchez T, Iglesias C, Ceballos H, Roca W2000 Iron, carotene, and ascorbic acid in cassava roots and leaves. Food and Nutrition Bulletin 21:410-413).

Accuracy is the correlation between the predicted and the true genetic values ​​ ​​of the individuals (Resende 2002Resende MDV2002 Genética biométrica e estatística no melhoramento de plantas perenes. Embrapa Florestas, Colombo, 975p). According to Resende and Duarte (2007Resende MDV, Duarte JB2007 Precisão e controle de qualidade em experimentos de avaliação de cultivares. Pesquisa Agropecuária Tropical 37:182-194), accuracy values ​​around 0.60 are average, from 0.70 to 0.89 are moderate and are high if above 0.90. The accuracy estimates ( rg^g ) obtained in this work (0.88 in RY, 0.92 in DMC, 0.96 in TC, BC and TrBC and 0.90 in TCy; Table 3) are therefore moderate in RY and high in the other traits.

The RY mean of the 26 clones in this work (13.51 t ha-1) is lower than those obtained by Vieira et al. (2018Vieira EA, Fialho JF, Julio L, Carvalho LJCB, Dalla Corte JL, Rinaldi MM, Oliveira Oliveira, CM CM, Fernandes FD, Anjos JRN2018 Sweet cassava cultivars with yellow or cream root pulp developed by participatory breeding. Crop Breeding and Applied Biotechnology 18:450-454), Parkes et al. (2020Parkes E, Aina O, Kingsley A, Iluebbey P, Bakare M, Agbona A, Akpotuzor P, Labuschagne M, Kulakow P2020 Combining ability and genetic components of yield characteristics, dry matter content, and total carotenoids in provitamin A cassava F1 cross-progeny. Agronomy 10:1850), Peprah et al. (2020Peprah BB, Parkes E, Manu-Aduening J, Kulakow P, Van Biljon A, Labuschagne M2020 Genetic variability, stability and heritability for quality and yield characteristics in provitamin A cassava varieties. Euphytica 216:1-13): (26.86, 16.23 and 23.43 t ha-1, respectively). Regarding DMC, estimates in the literature range from 24.12% to 28.21% (Araújo et al. 2019Araújo FDCBD, Moura EF, Cunha RL, Farias JTD, Silva RDS2019 Chemical root traits differentiate ‘bitter’ and ‘sweet’ cassava accessions from the Amazon. Crop Breeding and Applied Biotechnology 19:77-85, Parkes et al. 2020Parkes E, Aina O, Kingsley A, Iluebbey P, Bakare M, Agbona A, Akpotuzor P, Labuschagne M, Kulakow P2020 Combining ability and genetic components of yield characteristics, dry matter content, and total carotenoids in provitamin A cassava F1 cross-progeny. Agronomy 10:1850, Peprah et al. 2020Peprah BB, Parkes E, Manu-Aduening J, Kulakow P, Van Biljon A, Labuschagne M2020 Genetic variability, stability and heritability for quality and yield characteristics in provitamin A cassava varieties. Euphytica 216:1-13), while the value obtained in this study was 31.79% (Table 3). The dry matter content (DMC) is important in sweet cassava because starch, which corresponds to 65-91% of the dry matter of cassava roots (Sánchez et al. 2009Sánchez T, Salcedo E, Ceballos H, Dufour DL, Mafla G, Morante N, Calle F, Pérez JC, Debouck DG, Jaramillo G, Moreno IX2009 Screening of starch quality traits in cassava (Manihot esculenta Crantz). Starke 61:12-19), has a great influence on its cooking (Bechoff et al. 2018Bechoff A, Tomlins K, Fliedel G, Lopez-Lavalle LAB, Westby A, Hershey C, Dufour D2018 Cassava traits and end-user preference: Relating traits to consumer liking, sensory perception, and genetics. Critical Reviews in Food Science and Nutrition 58:547-567), and almost all forms of sweet cassava consumption require the cooking of the roots.

Vitamin A deficiency causes serious health problems (Stevens et al. 2015Stevens GA, Bennett JE, Hennocq Q, Lu Y, De-Regil LM, Rogers L, Danaei G, Li G, White RA, Flaxman SR, Oehrle S-P, Finucane MM, Guerrero R, Bhutta ZA, Then-Paulino A, Fawzi W, Black RE, Ezzati M2015 Trends and mortality effects of vitamin A deficiency in children in 138 low-income and middle-income countries between 1991 and 2013: a pooled analysis of population-based surveys. The Lancet Global Health 3:e528), and biofortification is an inexpensive way to solve it (Bouis and Saltzman 2017Bouis HE, Saltzman A2017 Improving nutrition through biofortification: a review of evidence from HarvestPlus, 2003 through 2016. Global Food Security 12:49-58). β-carotene is one of the precursors of vitamin A. The means of TC (7.49 µg g-1), BC (6.16 µg g-1) and TrBC (5.09 µg g-1) obtained in this work are similar or slightly higher than those reported by Carvalho et al. (2012Carvalho LMJ, Oliveira ARG, Godoy RLO, Pacheco S, Nutti MR, Carvalho JLV, Pereira EJ, Fukuda WG2012 Retention of total carotenoid and β-carotene in yellow sweet cassava (Manihot esculenta Crantz) after domestic cooking. Food & Nutritional Research 56: I5788.) (TC: 6.53 µg g-1, BC: 3.73 µg g-1), Ikeogu et al. (2019Ikeogu UN, Akdemir D, Wolfe MD, Okeke UG, Chinedozi A, Jannink JL, Egesi CN2019 Genetic correlation, genome-wide association and genomic prediction of portable NIRS predicted carotenoids in cassava roots. Frontiers in Plant Science 10:1570) (TC: 4.72 µg g-1, TrBC: 1.58 µg g-1) and Parkes et al. (2020Parkes E, Aina O, Kingsley A, Iluebbey P, Bakare M, Agbona A, Akpotuzor P, Labuschagne M, Kulakow P2020 Combining ability and genetic components of yield characteristics, dry matter content, and total carotenoids in provitamin A cassava F1 cross-progeny. Agronomy 10:1850) (TC: 6.53 µg g-1). However, Sánchez et al. (2014Sánchez T, Ceballos H, Dufour D, Ortiz D, Morante N, Calle F, Zum Felde T, Domínguez M, Davrieux F2014 Prediction of carotenoids, cyanide and dry matter contents in fresh cassava root using NIRS and Hunter color techniques. Food Chemistry 151:444-451) and Jaramillo et al. (2018Jaramillo AM, Londoño LF, Orozco JC, Patiño G, Belalcazar J, Davrieux F, Talsma EF2018 A comparison study of five different methods to measure carotenoids in biofortified yellow cassava (Manihot esculenta). PLoS One 13:e0209702) report much higher estimates (TC ranging from 11 to 14.3 µg g-1, BC of 10.1 µg g-1), and Ceballos et al. (2013Ceballos H, Morante N, Sanchez T, Ortiz D, Aragon I, Chávez AL, Pizarro M, Dufour D2013 Rapid cycling recurrent selection for increased carotenoids content in cassava roots. Crop Science 53:2342-2351), report results varying from 2.4 to 14.7 µg g-1 in TC, while in BC the increase was from 2.3 to 8.6 µg g-1.

The content of cyanogenic glycosides is crucial in cassava since the final product of this metabolic pathway (HCN) is highly toxic (Mosayyebi et al. 2020Mosayyebi B, Imani M, Mohammadi L, Akbarzadeh A, Zarghami N, Edalati M, Alizadeh E, Rahmati M2020 An update on the toxicity of cyanogenic glycosides bioactive compounds: Possible clinical application in targeted cancer therapy. Materials Chemistry and Physics 246:122841). The TCy mean in this work was 61.35 µg g-1 (Table 3) and the range was from 35.53 to 110.51 µg of HCN g-1 (Table 5). Although the internationally established limit for a cassava clone to be considered sweet cassava is 50 µg g-1 (Feeley et al. 2012Feeley M, Agudo A, Bronson R, Edgar J, Grant D, Hambridge T, Schlatter J2012 Cyanogenic glycosides: addendum. In Safety evaluation of certain food additives and contaminants: prepared by the Seventy fourth meeting of the Joint FAO/WHO Expert Committee on Food Additives (‎JECFA)‎. World Health Organization, Geneva, p. 171-323), Lorenzi et al. (1993Lorenzi JO, Ramos MTB, Monteiro DA, Valle TL, Godoy Júnior G1993 Teor de ácido cianídrico em variedades de mandioca cultivadas em quintais do Estado de São Paulo. Bragantia 52:1-5) observed that 33% of 206 clones consumed as sweet cassava by Brazilian farmers had levels of cyanogenic compounds above 100 µg g-1. Since then, in Brazil the limit to consider a sweet cassava clone suitable for consumption is 100 µg g-1.

Table 5
Average genotypic values (µ+g) for the 26 evaluated sweet cassava clones

Correlations

The phenotypic (above the diagonal) and genotypic (below the diagonal) correlations are in Table 4. All genotypic correlations involving RY were not significant. A similar result was obtained by Silva et al. (2016Silva RDS, Moura EF, Farias Neto JTD, Sampaio JE2016 Genetic parameters and agronomic evaluation of cassava genotypes. Pesquisa Agropecuária Brasileira 51:834-841), regarding the correlation between RY and starch content. Differently, Parkes et al. (2020Parkes E, Aina O, Kingsley A, Iluebbey P, Bakare M, Agbona A, Akpotuzor P, Labuschagne M, Kulakow P2020 Combining ability and genetic components of yield characteristics, dry matter content, and total carotenoids in provitamin A cassava F1 cross-progeny. Agronomy 10:1850) observed significant genetic correlations between RY and DMC (0.16) and between RY and TC (-0.29). All phenotypic correlations involving RY (except RY vs DMC) were negative, while among the corresponding genotypic correlations, the only negative was between RY and TCy (rg=-0.34). Although the TCy vs RY (-0.34) and TCy vs TrBC (-0.27) correlations are not significant, the fact that all phenotypic and genotypic correlations involving TCy are negative is important, since in this trait the goal is to reduce the mean. The high and significant genetic correlations between TC and its fractions (Table 4) demonstrate that it is possible to increase the levels of β-carotene (BC) and trans-β-carotene (TrBC) by making selection over TC, which can make breeding for cassava biofortification faster and cheaper. Similarly, Ikeogu et al. (2019Ikeogu UN, Akdemir D, Wolfe MD, Okeke UG, Chinedozi A, Jannink JL, Egesi CN2019 Genetic correlation, genome-wide association and genomic prediction of portable NIRS predicted carotenoids in cassava roots. Frontiers in Plant Science 10:1570) observed a correlation of 0.97 between TC and TrBC.

Genotypic values

The genotypic values ​​(µ+g) of the 26 clones are shown in Table 5. The five best genotypic values ​​(five lowest of TCy and five highest of the other traits) are highlighted in bold and underlined. Of the five best clones in terms of RY (clones 3, 8, 10, 16 and 23), three (10, 16 and 23) are ​​among the top five in terms of DMC. Starch plays an important role in the cooking of cassava roots (Bechoff et al. 2018Bechoff A, Tomlins K, Fliedel G, Lopez-Lavalle LAB, Westby A, Hershey C, Dufour D2018 Cassava traits and end-user preference: Relating traits to consumer liking, sensory perception, and genetics. Critical Reviews in Food Science and Nutrition 58:547-567). Regarding TC, BC and TrBC, four clones (4, 5, 14 and 17) have the highest genotypic values ​​in all, reflecting the high genetic correlations among them. Clone 4 has the best overall performance. Its genotypic values ​​of DMC (33.37%), TC (10.51 µg g-1), BC (8.77 µg g-1), TrBC (7.85 µg g-1) and TCy (38.64 µg HCN g-1) are among the top five and, although the genotypic value of RY (15.19 t ha-1) is not among the five highest, it is very close to the lowest value among the five highest (18.30 t ha-1). This demonstrates that it is possible to obtain individuals with adequate means in all the important traits, in the context of cassava biofortification.

ACKNOWLEDGMENTS

The authors thank Mieko Kimura for her participation in the sample laboratory assessment.

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Publication Dates

  • Publication in this collection
    14 Aug 2023
  • Date of issue
    2023

History

  • Received
    16 Mar 2023
  • Accepted
    14 June 2023
  • Published
    30 June 2023
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