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Heteromorphic, physiological and molecular characteristics of Gazania spp grow in North Coast of Egypt

Características heteromórficas, fisiológicas e moleculares de Gazania spp crescem na costa norte do Egito

Abstract

Gazania (L.) is one of wild ornamental plant which has special architectures. It is a small genus of 16 species, belonging to the family Asteraceae (Formerly: Compositae). It is low-growing perennial herb, grow in clumps and can also form dense carpets covering large areas. Gazania has multiple genera and species with mutli-petals colors. The chlorophyll pigmentation was measured in leaves and petals of these specimens which show high significant difference. Genomics is the study of genomes, and it can be used to conduct research on genome evolution, genomic variations, gene regulation, and important biological mechanisms using detailed genome sequence information. The diversity of ornamental plants, as well as the slow progress of genome research on ornamental plants for a long time. RAPD-PCR was applied in the present study to estimate the genetic variation in these samples which resulted in a total polymorphism percentage of 42.36%. This polymorphism percentage lead to the variation in essential physiological pathways in Gazania spp and reflected on the multivariate petals color.

Keywords:
Carotenoids; Chlorophyll; Gazania krebsiana; Gazania rigens; RAPD-PCR

Resumo

Gazania (L.) é uma planta ornamental silvestre que possui arquiteturas especiais. É um pequeno gênero de 16 espécies, pertencente à família Asteraceae (Anteriormente: Compositae). É uma erva perene de baixo crescimento, cresce em tufos e também pode formar tapetes densos que cobrem grandes áreas. Gazania tem vários gêneros e espécies com cores de múltiplas pétalas. A pigmentação da clorofila foi medida nas folhas e pétalas desses espécimes que apresentam alta diferença significativa. Genômica é o estudo de genomas e pode ser usada para conduzir pesquisas sobre a evolução do genoma, variações genômicas, regulação gênica e mecanismos biológicos importantes, usando informações detalhadas da sequência do genoma. A diversidade das plantas ornamentais, assim como o lento progresso da pesquisa do genoma de plantas ornamentais há muito tempo. O RAPD-PCR foi aplicado no presente estudo para estimar a variação genética nessas amostras que resultou em uma porcentagem total de polimorfismo de 42,36%. Este percentual de polimorfismo leva à variação nas vias fisiológicas essenciais em Gazania spp e reflete na cor multivariada das pétalas.

Palavras-chave:
Carotenóides; Clorofila; Gazania krebsiana; Gazania rigens; RAPD-PCR

Introduction

Ornamental plants are economically important for the horticultural industry. They are sold all over the world as cut flowers and are used in gardening, landscaping, and floristry. Improved floral anatomy and morphology, new floral color, induced early flowering, enhanced fragrance or longevity, stress tolerance or disease resistance have all been used to introduce original traits of high commercial interest for producers and/or consumers through genetic modification of ornamental plants (Azadi et al., 2016AZADI, P.; BAGHERI, H.; NALOUSI, A.M.; NAZARI, F.; CHANDLER, S.F. Current status and biotechnological advances in genetic engineering of ornamental plants. Biotechnology Advances, v.34, p.1073-1090, 2016. https://doi.org/10.1016/j.biotechadv.2016.06.006
https://doi.org/10.1016/j.biotechadv.201...
; Darqui et al., 2017DARQUI, F.S.; RADONIC, L.M.; HOPP, H.E.; BILBAO, M.L. Biotechnological improvement of ornamental plants. Ornamental Horticulture, v.23, p.279-288, 2017. https://doi.org/10.14295/oh.v23i3.1105
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; Kishi-Kaboshi et al., 2018KISHI-KABOSHI, M.; AIDA, R.; SASAKI, K. Genome engineering in ornamental plants: current status and future prospects. Plant Physiology and Biochemistry, v.131, p.47-52, 2018. https://doi.org/10.1016/j.plaphy.2018.03.015
https://doi.org/10.1016/j.plaphy.2018.03...
; Scaramuzzino, 2019SCARAMUZZINO, R. Gazania rigens (L.) Gaert. (Asteraceae) en dunas costeras de la Provincia de Buenos Aires, Argentina Gazania rigens (L.) Gaert. (Asteraceae) in coastal dunes in Buenos Aires province, Argentina. Historia Natural, v.9, n.1, p.115-120, 2019.; Boutigny et al., 2020BOUTIGNY, A.L.; DOHIN, N.; PORNIN, D.; ROLLAND, M. Overview and detectability of the genetic modifications in ornamental plants. Horticulture Research, v.7, p.11, 2020. https://doi.org/10.1038/s41438-019-0232-5
https://doi.org/10.1038/s41438-019-0232-...
). Ornamental plants affect impact on human life through their variety of shape, color, leaves, flowers, and scent fragrance (Abdulrazzaq, 2017ABDULRAZZAQ, Z.M. Effect of garlic and licorice extracts on vegetative, root and floral trait of Gazania splendes L. Journal of Plant Production, v.8, n.10, p.1055-1058, 2017. https://doi.org/10.21608/JPP.2017.41092
https://doi.org/10.21608/JPP.2017.41092...
; Dębicz et al., 2017DĘBICZ, R.; PAWLIKOWSKA, A.; WRÓBLEWSKA, K.; BĄBELEWSKI, P. The influence of silicon and multinutrient fertilizer on the quality and chemical composition of Gazania rigens ‘kiss yellow’, salvia farinacea ‘fairy queen’ and verbena ‘obsession lilac’ plants. Journal of Horticultural Research, v.25, n.1, p.35-45, 2017. https://doi.org/10.1515/johr-2017-0004
https://doi.org/10.1515/johr-2017-0004...
).

Gazania is a flowering plant genus native to Southern Africa that belongs to the Asteraceae family. Throughout the summer, they produce large, daisy-like composite flowerheads in brilliant shades of multi-colors. It is an herbaceous perennial plant named for a flower shape resembling a medal They’re commonly used as a drought- and salt-resistant groundcover. It is a type of annual flower that serves as a decorative element for public greens, gardens, and flower stands (Howis et al., 2009HOWIS, S.; BARKER, N.P.; MUCINA, L. Globally grown, but poorly known: species limits and biogeography of Gazania Gaertn. (Asteraceae) inferred from chloroplast and nuclear DNA sequence data. Taxon, v.58, n.3, p.871-882, 2009.; Talebi et al., 2014TALEBI, M.; HADAVI, E.; JAAFARI, N. Foliar sprays of citric acid and malic acid modify growth, flowering, and root to shoot ratio of Gazania (Gazania rigens L.): a comparative analysis by ANOVA and structural equations modeling. Advances in Agriculture, v.2014, Article ID147278, 6 pages, 2014. http://dx.doi.org/10.1155/2014/147278
http://dx.doi.org/10.1155/2014/147278...
; Zeng et al., 2016ZENG, J.; WANG, D.; WU, Y.; GUO, X.; ZHANG, Y.; LU, X. Karyotype analysis of Gazania rigens varieties. Horticultural Plant Journal, v.2, n.5, p.279-283, 2016.; El-Naggar et al., 2020EL-NAGGAR, A.H.; EL-KIEY, T.M.; KOREISH, E.; Zaid, N.M. Physiological response of gazania plants to growing media and organic compost. The 6th Conf. of SSFOP “Sustainable Development of Ornamental, Medicinal and Aromatic Plants Scope”, Cairo, Egypt, p.11-26, 2020. https://doi.org/10.21608/sjfop.2020.91393.
https://doi.org/10.21608/sjfop.2020.9139...
).

Gazania rigens (L.) Gaertn. (Treasure flower) is a widely cultivated ornamental garden plant that has naturalised elsewhere. Gazania is an annual perennial that thrives in rock gardens and other hot, dry environments. Generic name Gazania came from the Greek ‘Gaza’ which refers to the rich color, variety, and availability of the plant. It grows as a low, ground-hugging ground cover with daisy-like flowers in bright yellow, orange, or red. At night and on cloudy days, flowers close shop. It’s an excellent plant for preventing erosion in dry areas. It should be planted 12 to 18 inches apart to form a solid ground cover after a few months. The plant thrives in good soil, but it can also thrive in poor, sandy soil. Most annuals and perennials require more water than Gazania. The flowers prefer full sun and do not open fully on cloudy or rainy days. Disease can be spread by prolonged wet weather or poorly drained soil, killing parts of the plant. Removing the old blossoms may result in more blooms being produced (Reddy et al., 2014REDDY, K.D.; REDDY, K.H.; BRENDA, M.; KOORBANALLY, N.A.; PATRICK, G. Bio evaluation of different fractions of Gazania rigens. Journal of Pure and Applied Microbiology, v.8, n.6, p.1-3, 2014.; Salehi Sardoei and Shahdadneghad 2014SALEHI SARDOEI, A.; SHAHDADNEGHAD, M. Response of application zinc sulphate and ascorbic acid on Gazania (Gazania rigens) plants. International Journal of Biological Science, v.1, n.1, p.54-59, 2014. ; Sabatino et al., 2019SABATINO, L.; D’ANNA, F.; TORTA, L.; FERRARA, G.; IAPICHINO, G. Effects of arbuscular mycorrhizal fungi on Gazania rigens Pot plant cultivation in a mediterranean environment. Notulae Botanicae Horti Agrobotanici Cluj-Napoca, v.47, n.1, p.221-226, 2019. http://dx.doi.org/10.15835/nbha47111272.
http://dx.doi.org/10.15835/nbha47111272...
). Gazania krebsiana Less. is a grassland species that clings to the ground. It is one of the first plants to bloom in the spring, with small clumps of yellow or white flowers appearing between low grass tussocks or burnt stubble, or as leafless single flowers that appear to be stuck in the soil. Buttercup-yellow rays are frequently found in forms with dark spots at the base. This species is used in folk medicine and antibiotics (Tshabalala et al., 2016TSHABALALA, B.D.; ALAYANDE, K.A.; SABIU, S.; ASHAFA, A.O.T. Antimicrobial and anthelmintic potential of root and leaf extracts of Gazania krebsiana Less. subsp. serrulata (DC.) Roessler: An in vitro assessment. European Journal of Integrative Medicine, v.8, p.533-539, 2016.; Hlokoane 2021HLOKOANE, O. Gazania krebsiana Less. (Asteraceae): A potential source of new antibiotic medicine. Academia Letters, Article 1312, 2021. https://doi.org/10.20935/AL1312
https://doi.org/10.20935/AL1312...
).

To develop new floral crops and breed new cultivars, numerous studies on plant genetic resources exploitation and ornamental plant breeding have been conducted. More than 6000 species were rated potential as ornamental plants after nearly ten years of investigation and evaluation of wild plant species and some cultivated species across many countries. Morphological traits and molecular markers were used to investigate the genetic diversity of some unique ornamental plants in China (including Prunus mume, Chrysanthemum morifolium, Gazania spp., Paeonia spp., Rosa rugosa, Lilium spp., Lagerstroemia spp., and others) (Zhang et al., 2012ZHANG, Q.X.; PAN, H.T.; SUN, M.; YANG, W.Y.; WANG, J. Unique ornamental plant genetic resources and breeding in China. Acta Horticulturae, v.937, p.135-140, 2012. https://doi.org/10.17660/ActaHortic.2012.937.16.
https://doi.org/10.17660/ActaHortic.2012...
).

In this study, a classification of different Gazania spp was performed. This study based on morphological description of petals, pigmentation concetration, and total protein contents. The RAPD-PCR molecular marker was applied to estimate the genetic variation among these different species and forms.

Materials and Methods

Collection of plant materials

Five different Gazania forms were collected from Al-Zeraa Al-Bahary, Al-Hammam, North Coast, Egypt (km 69.150, Alex-Matrouh Costal Rd.). The latitudes of samples were recorded; latitude 30.862492 and longitude 29.311286. The specimens were collected from a scientific tripe at January, 2021. The collected samples have different petal patterns in color and shape.

Morphological description

The collected Gazania samples were morphologically identified and described according to Boulos (2005BOULOS, L. Flora of Egypt. Egypt: AL Hadara publishing, 2005. 617p.) and Kadereit and Jeffrey (2007KADEREIT, J.W.; JEFFREY, C. The Families and Genera of Vascular Plants. VIII Flowering Plants · Eudicots Asterales. Berlin: Springer, 2007. 636p.).

Estimation of petals pigmentation

According to Metzener et al. (1965METZENER, H.; RAU, H.; SENGER, H. Studies on synchronization of some pigment-deficient Chlorella mutants. Planta, v.65, p.186-194, 1965.), chlorophyll a, b, and carotenoids were measured in both the plantlet’s fresh leaves and colored petals separately. In 5 ml of 85% acetone, a known weight of fresh leaves (0.5 g) was homogenized. The pigment-containing supernatant was made up to a definite volume (10 ml) with 85% acetone after centrifugation. At three wavelengths (452, 645 and 664 nm), the extract was compared to a blank of pure 85 percent aqueous acetone using a colorimeter. The concentration of chlorophyll a, b and carotenoids were calculated as µg g-1 leaf fresh weight using the following equations:

where A= absorbance at different wave lengths.

After that, the fractions were calculated as mg g-1 fresh weight:

Estimation of total proteins

The total protein was extracted according to Bradford (1976BRADFORD, M.M. A rapid and sensitive method for the quantitation of microgram quantities of protein utilizing the principle of protein-dye binding. Analytical Biochemistry, v.72, p.248-254, 1976.) and some modification by Tawfik (2021TAWFIK, E. Different cultivation media conditions affecting behavior and genetic stability of Lepidium sativum L. Natural Resources for Human Health, p.1-6, 2021. ) and Hussien et al. (2021HUSSIEN, E.T.; SHABAN, S.A.; ALI, O.M.; SEEL, H.K.M.; EL-SAYED, N.E.A.; SAMIR, Y.E.; REMALY, G.M.; MOHAMMED, A.S. Chemical profile and antibacterial activity of Mentha viridis L. essential oils and ethanolic extract. Journal of Agricultural and Crop Research, v.9, n.2, p.34-39, 2021. https://doi.org/10.33495/jacr_v9i2.21.110
https://doi.org/10.33495/jacr_v9i2.21.11...
) as follows: 0.5 g of leaves was weighted and grind well with 0.5 ml of [2x] Bradford reagent. Then vortex 10 min and centrifuge for 15 min at 24,104 g at 4 oC. The supernatant contained the total protein content of plant species. Finally, the protein concentration was estimated according to (Bradford, 1976) as follows: 0.1ml of supernatant was pipette into a test tube and 5ml of protein reagent was added, mixed and measured by spectrophotometer at wavelength 595 nm. The concentration of protein was determined from the protein standard curve (using bovine serum albumin). The concentration was calculated according to the following equation:

where X was the protein concentration (mg g-1), and Y the absorbance (nm).

DNA isolation and RAPD-PCR bioassay

Edwards et al. (1991EDWARDS, K.; JOHNSTONE, C.; THOMPSON, C. A Simple and rapid method for the preparation of plant genomic DNA for PCR Analysis. Nucleic Acid Research, v.19, p.1349, 1991. https://doi.org/10.1093/nar/19.6.1349.
https://doi.org/10.1093/nar/19.6.1349...
) used the cetyltrimethylammonium bromide (CTAB) method to isolate total genomic DNA from each Gazania spp of form. About 0.3 g of leaves was ground in 700 µl of 2% CTAB buffer and incubated for 30 min. at 65 oC with vertexing every 10 minutes. The supernatant was transferred into new Eppendorf tubes after centrifugation at 12,000 rpm for 10 min. Each tube was filled with an equal volume of chloroform: isoamyl alcohol (24:1) and allowed to sit for 2 min. at room temperature before being centrifuged at 12,000 rpm for 10 min. at 4 °C. The upper aqueous layer was transferred to new tubes and 800 µl of absolute ice-cold ethanol was added before being left at -20 oC for about two hours. After that, centrifuge to extract DNA pellets and then wash them in 70% ice-cold ethanol. Finally, resuspend the pellets in 50 µl of Tris/EDTA buffer (TE) buffer and keep them at -20 oC till applying the RAPD-PCR reaction.

In this bioassay, ten RAPD decamer primers were used. Only six of them produced repeatable clear bands, Table (1). In a Biometra thermocycler, the RAPD-PCR reaction was carried out as follow; the reaction mixture containing 12.5 µl Taq master mix (COSMO PCR RED M. Mix, W1020300x), 2 µl genomic DNA, 1 µl each primer (Willowfort), and 9.5 l dd-H2O in a total volume of 25 µl. The PCR reaction program was as follows; initial denaturation at 95 oC for 5 min, 35 cycles of denaturation for 30 s at 94 oC, annealing 30 s, and extension for 1 min at 72 oC. After that, one step of final extension at 72 oC for 10 min then cools at 4 oC. The amplified PCR product was run on 1.4% agarose gel compared to (New England Biolab, #N3232S) ladder”.

Table 1
Primer Data analysis of RAPD-PCR bioassay with different Gazania spp

Statistical analysis

The gel electrophoresis images were divided into two categories: 1 ‘band present’ and 0 ‘band absent.’ Using Jaccard’s similarity coefficient, a pairwise similarity matrix was created. Cluster analysis was performed to develop a dendrogram using the unweighted pair group method with the arithmetic averaging algorithm (UPGMA). Bio-Rad Quantity one (4.6.2) was used to perform these calculations (Shuaib et al., 2007SHUAIB, M.; ZEB, A.; ALI, Z.; ALI, W.; AHMAD, T.; KHAN, I. Characterization of Wheat Varieties by Seed Storage Protein Electrophoresis. African Journal of Biotechnology, v.6, p.497-500, 2007.). The data was subjected to an analysis of mean averages and standard deviations were calculated using Minitab 19.

Results

Morphological description of Gazania spp

The different forms of Gazania rigens and Gazania krebsiana were collected from Al-Hammam region. However, they were collected from the same region; it was observed the different patterns of color and shape of their petals (Figure 1). Sample (1): it was identified as Gazania krebsiana Less. and has red petals with dark red central line and purple tips, it also known as “Copper King or Harlequin”. Sample (2): it was identified as G. rigens and it has homogenous white petals with yellow ends. Sample (3): G. rigens, homogenous orange color. Sample (4): G. rigens var. rigens, orange petals with central red line. Sample (5): G. krebsiana Less., homogenous yellow color. All the petals have tapered end and black color at their base connected to the flower disc. The leaves of all forms are foliage leaves with same description of shape and color.

Figure 1
Different forms of Gazania spp.; G. krebsiana (1), G. rigens (1), G. rigens (3), G. rigens var. rigens (4), G. krebsiana (5).

Physiological parameters of Gazania spp

Leaves and petals pigmentation concentrations and total protein contents were the physiological parameters measured for Gazania spp. (Figures 2 and 3). The different color of their petals comes from the different pigmentation expressed from variable proteins in the synthesis pathway of these different pigments.

Figure 2
Different pigmentations’ concentrations in leaves and petals of Gazania spp.

Figure 3
Total protein content in Gazania spp.

Molecular marker bioassay

High molecular weight genomic DNA was isolated successfully from all the fresh and dried tissues samples. Ten RAPD primers were applied and only six of them gave clear and reproducible bands. RAPD reactions resulted in some polymorphic bands in many primers (Figure 4).

Figure 4
Fingerprint patterns generated using Gel banding pattern of RAPD-PCR (a) OPA-12 primer, (b) OPA-09, (c) OPB-17, (d) OPN-02, (e) OPN-04 and (f) OPZ-07 for Gazania spp.; 1 ‘G. krebsiana’, 2 G. rigens, 3 G. rigens, 4 G. rigens var. rigens, 5 G. krebsiana.

These bands ranged in size from 180 to 850 bp resulting in a total number of 42 bands with 17 polymorphic bands. The total polymorphism percentage resulted from all these primers were 42.36%, (Table 1). These polymorphic bands could be expressed into different proteins leading to different pigmentation. The total monomorphic bands resulted from the six primers were 25 bands. These monomorphic bands ensured the main ancestor of these species and they are closely related species.

The total phylogenetic tree was designed using CAP software (Figure 5). It is based on physiological parameters and total genetic variation similarity matrix. The tree illustrated that G. krebsiana was separated in clade away from the other forms. Where, G. rigens, sample (2), G. rigens var. rigens, sample (4) and sample (5) were closely related to each other’s.

Figure 5
Phyllogenetic tree of Gazania spp based on physiological and molecular data based on Figure 1; 1 ‘G. krebsiana’, 2 ‘G. rigens’, 3 G. rigens’, 4 ‘G. rigens var. rigens’ and 5 ‘G. krebsiana’.

Discussion

The variation in petals color and shape could be due to hybridization among the different Gazania species. These findings were confirmed by Kadereit and Jeffrey (2007KADEREIT, J.W.; JEFFREY, C. The Families and Genera of Vascular Plants. VIII Flowering Plants · Eudicots Asterales. Berlin: Springer, 2007. 636p.) who stated that “Most common are hybrids originating from Gazania krebsiana, G. linearis and G. rigens, which are cultivated all over the world”.

Another explanation of color variation could be due to soil constituents and how plant uptake the nutrients and minerals from soil. This phenomenon was explained by Hassan et al. (2015HASSAN, B.A.; HUSSEIN, M.K.; EL-KIEY, T.M.; WEHEDA, B.M. effect of some growing media on growth and flowering of Gazania Plant. Alexandria Science Exchange Journal, v.36, n.1, p.15-24, 2015.) “This kind of soil spread in the northern western coast from Alexandria to the west limits of Egypt and in lot of the Arab countries, especially located in Mediterranean basin. Soil conditioners vary greatly in their composition, application rate, and mode of action. Several natural materials have been found to improve various physical properties of the calcareous soil such as compost, sand and others.”

The petals are usually orange, yellow, or white, but bronze or pink can also be seen. They are frequently brown at the base, forming an attractive ring in the center. In the dark, the flowers close and open again with the first rays of the sun. With a red stripe dissipating over each deep yellow petal, Daybreak Red Stripe’ is a truly unique variation of this Gazania spp. When the flowers open, this creates the startling effect of a radiating sun (Salehi Sardoei and Shahdadneghad 2014SALEHI SARDOEI, A.; SHAHDADNEGHAD, M. Response of application zinc sulphate and ascorbic acid on Gazania (Gazania rigens) plants. International Journal of Biological Science, v.1, n.1, p.54-59, 2014. ). Also, Talebi et al. (2014TALEBI, M.; HADAVI, E.; JAAFARI, N. Foliar sprays of citric acid and malic acid modify growth, flowering, and root to shoot ratio of Gazania (Gazania rigens L.): a comparative analysis by ANOVA and structural equations modeling. Advances in Agriculture, v.2014, Article ID147278, 6 pages, 2014. http://dx.doi.org/10.1155/2014/147278
http://dx.doi.org/10.1155/2014/147278...
) confirmed the variation in flower colors and mentioned that “increasing of ornamental performance is a major concern, especially in harsh urban condition”. Howis et al. (2009HOWIS, S.; BARKER, N.P.; MUCINA, L. Globally grown, but poorly known: species limits and biogeography of Gazania Gaertn. (Asteraceae) inferred from chloroplast and nuclear DNA sequence data. Taxon, v.58, n.3, p.871-882, 2009.) also, mentioned that the taxonomy of Gazania is confusing in both wild and cultivated species.

The description and identification of G. krebsiana agreed with Batten (1988BATTEN, A. Flowers of Southern Africa. Sandton Johannesburg: Frandsen Publishers, 1998. 401p.) who stated that “The buttercup-yellow rays often occur in forms having dark spots at the base. The showy flowers open only in strong sunlight, closing with fading light and re-opening the following day. This plant is perennial and grows from a woody rootstock. The leaves are tufted and linear in shape, white-felted on the underside, and exuding milky latex when damaged”.

Total carotenoids increased with increase of total proteins in the different Gazania spp. According to Bahari et al. (2013BAHARI, A.; PIRDASHTI, H.; YAGHUBI, M. Effects of amino acid fertilizers spraying on photosynthetic pigments and antioxidant enzymes of wheat (Triticum aestivum L.) under salinity stress. International Journal of Agronomy and Plant Production, v.4, n.4, p.787-793, 2013.), the highest value of total carotenoids was achieved by using amino acid treatments on Triticum aestivum L. Nia et al. (2015NIA, A.F.; BAHMAN, S.; BADI, H.N.; MEHRAFARIN, A.; LABBAFI, M. Morpho-physiological and phytochemical traits of gazania (Gazania rigens) affected by foliar application of bio-stimulants. Eurasian Journal of Biosciences, v.9, p.21-28, 2015. http://dx.doi.org/10.5053/ejobios.2015.9.0.3.
http://dx.doi.org/10.5053/ejobios.2015.9...
) also stated that amino acids are necessary components of all cells. They participate in both primary and secondary metabolic processes associated with plant development and stress responses, in addition to protein synthesis.

Amino acids are necessary components of all cells. They participate in both primary and secondary metabolic processes associated with plant development and stress responses, in addition to protein synthesis. Glutamate, glutamate, aspartate, and asparagines, for example, serve as nitrogen pools and transporters while also balancing the carbon/nitrogen ratio. Muller et al. (1995MULLER, B.; TILLARD, P.; TOURAINE, B. Nitrate fluxes in soybean seedling roots and their response to amino acids: an approach using 15N. Plant Cell Environment, v.18, n.11, p.1267-1279, 1995. http://dx.doi.org/10.1111/j.1365-3040.1995.tb00186.x
http://dx.doi.org/10.1111/j.1365-3040.19...
) found that other amino acids like tryptophan, methionine, proline, and arginine contribute to plant tolerance to biotic and abiotic stresses, either directly or indirectly, by serving as precursors to secondary compounds and hormones. Amino acids and phenolic acids applied to the leaves of Ammi visnaga (L.) Lam. plants improved growth and phytochemical traits such as pigment content (Talaat et al., 2013TALAAT, I.M.; KHATTAB, H.I.; AISHA, M.A. Changes in growth, hormones levels and essential oil content of Ammi visnaga plants treated with some bio-regulators. Bioscience, v.5, n.2, p.57-64, 2013. http://dx.doi.org/10.13057/nusbiosci/n050202
http://dx.doi.org/10.13057/nusbiosci/n05...
; Nia et al., 2015NIA, A.F.; BAHMAN, S.; BADI, H.N.; MEHRAFARIN, A.; LABBAFI, M. Morpho-physiological and phytochemical traits of gazania (Gazania rigens) affected by foliar application of bio-stimulants. Eurasian Journal of Biosciences, v.9, p.21-28, 2015. http://dx.doi.org/10.5053/ejobios.2015.9.0.3.
http://dx.doi.org/10.5053/ejobios.2015.9...
).

In many plant species, DNA analysis has become a standard method for estimating genetic diversity. Because of this, Prakash and van Staden (2007PRAKASH, S.; VAN STADEN, J. Assessment of genetic relationships between Rhus L. species using RAPD markers. Genetic Resources and Crop Evolution, v.54, n.1, p.7-11, 2007.); Tan and Yiap (2007TAN, S.C.; YIAP, B.C. DNA, RNA and protein extraction: The past and the present. Journal of Biomedicine and Biotechnology, p.10, 2009.) recommend optimising DNA isolation protocols as a first step in molecular analysis of medicinal plants (2009). The RAPD method was used to estimate genetic diversity among A. montana genotypes. A technique known as randomly amplified polymorphic DNA identified a large number of polymorphic products. Kizhakkayil and Sasikumar (2010KIZHAKKAYIL, J.; SASIKUMAR, B. Genetic diversity analysis of ginger (Zingiber officinale Rosc.) germplasm based on RAPD and ISSR markers. Scientia Horticulturae, v.125, n.1, p.73-76, 2010.), Okoń and Surmacz-Magdziak (2011OKOŃ, S.; SURMACZ-MAGDZIAK, A. The use of RAPD markers for detecting genetic similarity and molecular identification of chamomile (Chamomilla recutita (L.) Rausch.) genotypes. Herba Polonica Journal, v.57, n.1, p.38-47, 2011.) and Okoń et al. (2014OKOŃ, S.; PACZOS-GRZĘDA, E.; ŁOBODA, M.; SUGIER, D. Identification of genetic diversity among Arnica montana L. genotypes using RAPD markers. Acta Scientiarum Polonorum Hortorum Cultus, v.13, n.4, p.63-71, 2014.). Zheng et al. (2021ZHENG, T.; LI, P.; LI, L.; ZHANG, O. Research advances in and prospects of ornamental plant genomics. Horticulture Research , v.8, p.65, 2021. https://doi.org/10.1038/s41438-021-00499-x
https://doi.org/10.1038/s41438-021-00499...
) mentioned that molecular markers were applied to estimate the genetic variation among Asteraceae genera.

Conclusions

Ornamental plants, which are an important part of agriculture and horticulture, are important for beautifying and improving people’s living environments, cultivating human sentiment, and promoting agricultural structural changes. Gazania is an important ornamental genus with a wide range of petal colors. These variations in the physiological measurements come from the genetic variation in DNA contents, with percentage of 42.36%. All of these parameters reflected on morphology of petals shape and color patterns. So, the different patterns of the collected samples led to differentiation in classification of Gazania specimens.

Author Contribution

MSAS: Conceptualization, funding acquisition, resourses. ET: Formal analysis, investigation, original draft preparation, text review and editing, funding acquisition, resourses.

Acknowledgments

Present study expenses were carried out with author acknowledgements by Botany and Microbiology Department, Faculty of science, Helwan University, Egypt. No funding received for this work.

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    Area Editor: Bruno Trevenzoli Favero

Publication Dates

  • Publication in this collection
    08 July 2022
  • Date of issue
    Apr-Jun 2022

History

  • Received
    16 Oct 2021
  • Accepted
    04 May 2022
  • Published
    07 June 2022
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