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Cupuaçu tree genotype selection for an agroforestry system environment in the Amazon

Seleção de genótipos de cupuaçu para um ambiente de sistema agroflorestal na Amazônia

Abstract:

The objective of this work was to select cupuaçu (Theobroma grandiflorum) tree progenies and individuals based on their agronomic traits, and, indirectly, to identify those adapted to an agroforestry system (AFS) environment in the Brazilian Amazon. For this purpose, 25 full-sib progenies were planted and tested in consortium with black pepper (Piper nigrum), banana (Musa spp.), and bacuri (Platonia insignis) trees. The experiment was carried out in a randomized complete block design, with five replicates and three plants per plot, from 2005 to 2019. For the statistical analyses, the phenotypic averages for production and incidence of witches’ broom disease, evaluated during 11 harvests, were used. Superior progenies and individuals were identified using the mixed model methodology (REML/BLUP), which led to the selection of ten plants from five families with superior agronomic traits. Cupuaçu tree progenies 6, 36, 37, 49, and 52 are the ones that best adapt to the environment of a multispecies AFS in the Amazon region because of their agronomic traits under competitive conditions. Ten matrices show agronomic potential and indirect adaptation to the AFS and can be used as clonal cupuaçu cultivars in this environment.

Index terms:
Theobroma grandiflorum; fruit tree breeding; genetic selection; REML/BLUP

Resumo:

O objetivo deste trabalho foi selecionar progênies e indivíduos de cupuaçuzeiro (Theobroma grandiflorum) com base em características agronômicas e, indiretamente, identificar aqueles adaptados a um ambiente de sistema agroflorestal (SAF) na Amazônia brasileira. Para tanto, 25 progênies de irmãos completos foram plantadas e testadas em consórcio com pimenta-do-reino (Piper nigrum), banana (Musa spp.) e bacuri (Platonia insignis). O experimento foi realizado em delineamento de blocos ao acaso, com cinco repetições e três plantas por parcela, de 2005 a 2019. Para as análises estatísticas, foram utilizadas as médias fenotípicas de produção e incidência da vassoura de bruxa avaliadas durante 11 safras. Progênies e indivíduos superiores foram identificados pela metodologia de modelos mistos (REML/BLUP), o que resultou na seleção de dez plantas de cinco famílias com características agronômicas superiores. As progênies de cupuaçu 6, 36, 37, 49 e 52 são as que melhor se adaptam ao ambiente de um SAF multiespécies na região amazônica, em razão de suas características agronômicas em condições competitivas. Dez matrizes apresentam potencial agronômico e adaptação indireta ao SAF e podem ser utilizadas como cultivares clonais de cupuaçu nesse ambiente.

Termos para indexação:
Theobroma grandiflorum; melhoramento de fruteiras; seleção genética; REML/BLUP

Introduction

The cupuaçu tree [Theobroma grandiflorum (Willd. ex. Spreng.) Schum.] is an arboreal species native to the Amazon, whose fruit are used to produce sweets, juice, ice creams, and jellies, among other products (Oliveira & Genovese, 2013OLIVEIRA, T.B. de; GENOVESE, M.I. Chemical composition of cupuassu (Theobroma grandiflorum) and cocoa (Theobroma cacao) liquors and their effects on streptozotocin-induced diabetic rats. Food Research International, v.51, p.929-935, 2013. DOI: https://doi.org/10.1016/j.foodres.2013.02.019.
https://doi.org/10.1016/j.foodres.2013.0...
).

The Amazon has been identified as the only reserve of cupuaçu genetic variability, and it is also the center of the species’ diversity. However, this region has undergone significant anthropogenic pressure through predatory exploitation and transformation of its natural landscape, with the consequent genetic erosion of this plant resource (Alves et al., 2007ALVES, R.M.; SEBBENN, A.M.; ARTERO, A.S.; CLEMENT, C.; FIGUEIRA, A. High levels of genetic divergence and inbreeding in populations of cupuassu (Theobroma grandiflorum). Tree Genetics & Genomes, v.3, p.289-298, 2007. DOI: https://doi.org/10.1007/s11295-006-0066-9.
https://doi.org/10.1007/s11295-006-0066-...
). Therefore, there is a need to understand the remaining genetic variability of the species. Since the late 1980s, Embrapa Amazônia Oriental has been conducting a genetic breeding program of the species in the state of Pará, Brazil, which aims to develop genotypes with superior levels of fruit production and resistance to the fungus Moniliophthora perniciosa (Stahel) Aime & Phillips Mora, an etiological agent of witches’ broom disease and the main pest that affects the cupuaçu tree cultivation (Alves et al., 2009ALVES, R.M.; RESENDE, M.D.V. de; BANDEIRA, B. dos S.; PINHEIRO, T.M.; FARIAS, D.C.R. Evolução da vassoura-de-bruxa e avaliação da resistência em progênies de cupuaçuzeiro. Revista Brasileira de Fruticultura, v.31, p.1022-1032, 2009. DOI: https://doi.org/10.1590/S0100-29452009000400015.
https://doi.org/10.1590/S0100-2945200900...
).

The most cupuaçu cultivation is carried out in agroforestry systems (AFSs), mainly in the northeastern Pará (Barros et al., 2009BARROS, A.V.L. de; HOMMA, A.K.O.; TAKAMATSU, J.A.; TAKAMATSU, T.; KONAGANO, M. Evolução e percepção dos sistemas agroflorestais desenvolvidos pelos agricultores nipo-brasileiros do município de Tomé-Açu, estado do Pará. Amazônia: Ciência & Desenvolvimento, v.5, 121-151, 2009.). AFSs are productive systems in which land is managed in a consortium, using a range of tree species to promote economic and ecological gains (Silva, 2013SILVA, D.P. da. SAFs: sistemas alternativos de produção. Revista de Extensão e Estudos Rurais, v.2, p.153-162, 2013. DOI: https://doi.org/10.36363/rever212013%25p.
https://doi.org/10.36363/rever212013%25p...
). Within AFSs, different plant strata can be created in an attempt to replicate the native forest structure, in which trees and shrubs are considered basic elements, combining floristic diversity with the environmental characteristics of the region in which they are established (Paludo & Costabeber, 2012PALUDO, R.; COSTABEBER, J.A. Sistemas agroflorestais como estratégia de desenvolvimento rural em diferentes biomas brasileiros. Revista Brasileira de Agroecologia, v.7, p.63-76, 2012.).

In addition to providing producers with genetic materials that meet their needs, such as high levels of fruit productivity and resistance to phytopathogens, the selection of genotypes adapted to conditions of interspecific competition for light, water, and nutrients that normally occur in AFS environments (Giustina et al., 2017GIUSTINA, C.D.; CARNEVALLI, R.A.; ROMANO, M.R.; ANTONIO, D.B.A.; ECKSTEIN, C. Growth of different fruit tree species in silvopastoral systems during the establishment phase. Revista Caatinga, v.30, p.1040-1049, 2017. DOI: https://doi.org/10.1590/1983-21252017v30n425rc.
https://doi.org/10.1590/1983-21252017v30...
) should be incorporated into the objectives of species breeding programs. Currently, researches trying to develop genotypes for these conditions are very rare, especially those involving perennial species. Alves et al. (2020)ALVES, R.M.; CHAVES, S.F. da S.; GAMA, M.A.P.; PEDROZA NETO, J.L.; SANTOS, T.G. dos. Simultaneous selection of cupuassu tree and Brazilian mahogany genotypes in an agroforestry system in Pará state, Brazil. Acta Amazonica, v.50, p.183-191, 2020. DOI: https://doi.org/10.1590/1809-4392202000711.
https://doi.org/10.1590/1809-43922020007...
report results obtained with Swietenia macrophylla King. and cupuaçu tree, when they identified genotypes with the mentioned traits.

The objective of this work was to select cupuaçu progenies and individuals for their superiority in fruit production and resistance to witches’ broom disease, and, indirectly, to select better adapted individuals to the agroforestry system environment.

Materials and Methods

The experiment was carried out over 14 years, from 2005 to 2019, on a rural property in the municipality of Tomé Açu (02°32'53.1"S, 48°15'52.8"W, at 45 m altitude), in the state of Pará, Brazil. The soil is classified as Latossolo Amarelo distrófico argissólico according to Brazilian soil classification system (Santos et al., 2018SANTOS, H.G. dos; JACOMINE, P.K.T.; ANJOS, L.H.C. dos; OLIVEIRA, V.Á. de; LUMBRERAS, J.F.; COELHO, M.R.; ALMEIDA, J.A. de; ARAÚJO FILHO, J.C. de; OLIVEIRA, J.B. de; CUNHA, T.J.F. Sistema brasileiro de classificação de solos. 5.ed. rev. e ampl. Brasília: Embrapa, 2018. 356p.), i.e., Oxisol, and it is deep and well drained, with a medium texture. The climate in the region is classified as Ami, according to the Köppen-Geiger’s classification, with 2,716 mm mean annual precipitation, 85% relative air humidity, and 26.4°C mean annual temperature (Bolfe & Batistella, 2011BOLFE, E.L.; BATISTELLA, M. Análise florística e estrutural de sistemas silviagrícolas em Tomé-Açu, Pará. Pesquisa Agropecuária Brasileira, v.46, p.1139-1147, 2011. DOI: https://doi.org/10.1590/S0100-204X2011001000004.
https://doi.org/10.1590/S0100-204X201100...
).

The experimental genetic material consisted of 25 full-sib progenies from the cupuaçu genetic breeding program established by Embrapa Amazônia Oriental, in the municipality of Belém, in the state of Pará, Brazil. The parents used to develop the studied progenies include primary clones, which were previously introduced by Embrapa: 'BRS Coari' (174); 'BRS Codajás' (186); 'BRS Manacapuru' (215); and 'BRS Belém' (286), using the cupuaçu controlled-pollination technique, reported by Venturieri & Ribeiro Filho (1995)VENTURIERI, G.A.; RIBEIRO FILHO, A.A. Polinização manual no cupuaçuzeiro (Theobroma grandiflorum). Acta Amazonica, v.25, p.181-191, 1995. DOI: https://doi.org/10.1590/1809-43921995253192.
https://doi.org/10.1590/1809-43921995253...
.

The AFS established for the present study consisted of an area of 0.9 ha, composed of four species: black pepper trees (Piper nigrum L.) planted in double rows of 2x2 m and 4 m apart (1,440 plants); free standing cupuaçu seedlings planted at 6x4 m spacing (375 plants), interspersed with banana tree seedlings (Musa spp.) in the planting row, originated from rhizomes, at the same spacing (375 plants); and grafted seedlings of bacuri (Platonia insignis Mart.) planted at 18x10 m spacing (49 plants) (Figura 1).

Figure 1.
Spatial distribution of species in the agroforestry system in the implantation (A) and in the maturation period (B).

All species were planted in February 2005, after mechanized clearing of the area and individual planting hole preparation. The experiment was conducted using a randomized complete block design, with 25 cupuaçu progenies, five replicates, and three plants per plot, for a total of 375 plants. The thinning dynamic of the temporary crop (banana) began in the fourth year after planting, and by the end of the sixth year, all banana clusters had been removed. The same occurred with the black pepper trees which remained in the field until the seventh year, at which point they were removed because they were affected by fusarium disease. From that point on, only bacuri and cupuaçu remained in the AFS.

The collection of data related to cupuaçu production began two years after planting, during the 2007/2008 harvest, and continued until the 2018/2019 harvest, for a total of 11 harvests. Data collected at each harvest included the number of fruit produced per plant and the average weight of the fruit for each plant, using a sample of five fruit per plant. Thus, for each harvest, fruit production (kg per plant) was estimated with the formula: production = number of fruit × mean fruit weight. The rate of witches’ broom disease was also estimated based on the following ratio: number of plants with symptoms of the disease / number of healthy plants.

For statistical analyses, the phenotypic averages of production and incidence of witches’ broom disease, evaluated during 11 harvests, were used. The statistical analyses were performed using the mixed model methodology (REML/BLUP) in the SELEGEN-REML/BLUP software (Resende, 2016RESENDE, M.D.V. de. Software Selegen-REML/BLUP: a useful tool for plant breeding. Crop Breeding and Applied Biotechnology, v.16, p.330-339, 2016. DOI: https://doi.org/10.1590/1984-70332016v16n4a49.
https://doi.org/10.1590/1984-70332016v16...
), in which the components of variance were estimated by the REML method (Patterson & Thompson, 1971PATTERSON, H.D.; THOMPSON, R. Recovery of inter-block information when block sizes are unequal. Biometrika, v.58, p.545-554, 1971. DOI: https://doi.org/10.1093/biomet/58.3.545.
https://doi.org/10.1093/biomet/58.3.545...
), and the genetic values were predicted by the BLUP method (Henderson, 1975HENDERSON, C.R. Best linear unbiased estimation and prediction under a selection model. Biometrics, v.31, p.423-447, 1975. DOI: https://doi.org/10.2307/2529430.
https://doi.org/10.2307/2529430...
) simultaneously. The following statistical model was used:

y=Xr+Zg+Wp+e,

in which: y is the vector of phenotypic data; r is the vector of replicate effects (assumed to be fixed) added to the general average; g is the vector of individual genotypic effects (assumed to be random) [ gN(0,σg2) , in which σg2 is the genotypic variance among full-sib progenies]; p is the vector of plot effects (assumed to be random) [ pN(0,σp2) , in which σp2 is the environmental variance between plots]; and e is the vector of residuals (random) [ eN(0,σe2) , which σe2 is the residual variance within a plot]. The capital letters represent the incidence matrices for these effects.

The significance of the random effects of the statistical model was tested by the likelihood ratio test (LRT) (Wilks, 1938WILKS, S.S. The large-sample distribution of the likelihood ratio for testing composite hypothesis. Annals of Mathematical Statistics, v.9, p.60-62, 1938. DOI: https://doi.org/10.1214/aoms/1177732360.
https://doi.org/10.1214/aoms/1177732360...
) using the Chi-square statistics, with one degree of freedom, and 0.05 type I probability of error. The individual phenotypic variance (σf2 ), the individual narrow-sense heritability ( ha2 ), the coefficient of determination of plot effects (cp2 ), the average heritability of progenies ( hmp2 ), the accuracy of progenies selection ( rgg ), and the additive heritability within a plot ( had2 ) were estimated using the following expressions, respectively (Resende et al., 2014RESENDE, M.D.V. de; SILVA, F.F. e; AZEVEDO, C.F. Estatística matemática, biométrica e computacional: modelos mistos, multivariados, categóricos e generalizados (REML/BLUP), inferência bayesiana, regressão, aleatória, seleção genômica, QTL, GWAS, estatística espacial e temporal, competição, sobrevivência. Viçosa: Ed. da UFV, 2014. 881p.):

σ f 2 = σ g 2 + σ p 2 + σ e 2 ; h a 2 = 2 σ g 2 / σ f 2 ; c p 2 = σ p 2 / σ f 2 ,

hmp2=σg2/[σg2+(σp2/r)+(σe2/rn)[,

rgg=hmp2andhad2=σg2/σr2,

in which: r is the number of replicates (5); and n is the number of plants per plot (3).

The progenies with the highest predicted genetic values for the two fruit production traits that maintained ortets with a low incidence of witches’ broom disease (<20%) were prioritized in individual selection. Individuals were ranked based on the predicted genetic values, considering the selection of possible genitors, and the predicted genotypic values, considering the selection of clones for the trait fruit production per plant. This trait was chosen as it is the most economically relevant, since it incorporates both the traits number of fruit and average weight of fruit. Therefore, the selection of individuals was not only based on the previously selected progenies, but also considered the ranking for the genetic and genotypic values and incidence of M. perniciosa.

To avoid a significant reduction in the genetic variability of the breeding population, only two ortets per progeny were selected, to mitigate the risks of resistance breaking and the occurrence of incompatibility that is common in the species and can cause yield diminishing (Alves et al., 2017ALVES, R.M.; SILVA, C.R. de S.; ALBUQUERQUE, P.S.B. de; SANTOS, V.S. dos. Phenotypic and genotypic characterization and compatibility among genotypes to select elite clones of cupuassu. Acta Amazonica, v.47, p.175-184, 2017. DOI: https://doi.org/10.1590/1809-4392201602104.
https://doi.org/10.1590/1809-43922016021...
). The temporal distribution of the productive period of the selected individuals was also evaluated, for which plants with greater production concentrated in the last months of the year (beginning of the harvest) were classified as early, plants with greater production in the first four months of the year (middle of the harvest) were classified as regular, and plants with greater production in the period from May to July (end of the harvest) were classified as late.

Results and discussion

Cupuaçu fruit production began two years after planting, and the fourth harvest showed an increase of 666% in the number of fruit over the first harvest (Figure 2). At that point, the production in the area stabilized, with minimal fluctuations in the subsequent seven harvests. Both the rapid evolution in the initial production, and the variations in production in the final harvests can be attributed to the same conditioning factor. Initially, the area was equipped with an irrigation system, which supplemented the need for water during the critical period of the year, providing optimal growing conditions. Later, the irrigation system was removed from the AFS. Thus, fruit production depended exclusively on rainfall, which occurred in the period immediately before harvest (July to December), as well as in the flowering period and in the beginning of fruiting (Venturieri, 2011VENTURIERI, G.A. Flowering levels, harvest season and yields of cupuassu (Theobroma grandiflorum). Acta Amazonica, v.41, p.143-152, 2011. DOI: https://doi.org/10.1590/S0044-59672011000100017.
https://doi.org/10.1590/S0044-5967201100...
), leading to annual fluctuations in the production from the fourth harvest onward. When evaluating the behavior of Theobroma cacao in response to variations of water availability in the soil, García Lozano & Fonseca (2016)GARCÍA LOZANO, J.; FONSECA, L.P.M. Respuestas fisiológicas de Theobroma cacao L. en etapa de vivero a la disponibilidad de agua en el suelo. Acta Agronómica, v.65, p.44-50, 2016. DOI: https://doi.org/10.15446/acag.v65n1.48161.
https://doi.org/10.15446/acag.v65n1.4816...
found a decrease of plant metabolism during water shortage, which was attributed mainly to the stomatal closure that paralyzes photosynthesis and, consequently, the production of photoassimilates.

Figure 2.
Average number of fruit per plant and average fruit production per plant (kg), for eleven harvests (from 2007/2008 to 2018/2019), in an experimental trial of full-sib cupuaçu (Theobroma grandiflorum) progenies.

Based on the likelihood ratio test (LRT), the genetic effects were significant, while the plot effects were not significant (p<0.05) for the average number of fruit and average fruit production (Table 1). Therefore, for both traits there was a genetic variability between full-sib progenies of cupuaçu, and the plot effects did not differ from zero.

Table 1.
Analyses of deviance for the traits average number of fruit per plant and average fruit production per plant, evaluated in an experimental trial of full-sib cupuaçu (Theobroma grandiflorum) families.

The estimated genotypic variance among the full-sib progenies was reasonably high, especially for the variable “fruit production” (Table 2). This is a desirable outcome, as it indicates a high genetic variability and supports the possibility of successful selection (Rosado et al., 2012ROSADO, A.M.; ROSADO, T.B.; ALVES, A.A.; LAVIOLA, B.G.; BHERING, L.L. Seleção simultânea de clones de eucalipto de acordo com produtividade, estabilidade e adaptabilidade. Pesquisa Agropecuária Brasileira, v.47, p.964-971, 2012. DOI: https://doi.org/10.1590/S0100-204X2012000700013.
https://doi.org/10.1590/S0100-204X201200...
). Corroborating this result, the selective accuracies were high (0.70 < rgg < 0.90) for the two traits, based on the classification proposed by Resende & Duarte (2007)RESENDE, M.D.V. de; DUARTE, J.B. Precisão e controle de qualidade em experimentos de avaliação de cultivares. Pesquisa Agropecuária Tropical, v.37, p.182-194, 2007.. According to Resende (2002)RESENDE, M.D.V. de. Genética biométrica e estatística no melhoramento de plantas perenes. Brasília: Embrapa Informação Tecnológica, 2002. 975p., the selective accuracy refers to the correlation between the predicted and true genetic values, and it is closely associated with the experimental quality. As verified through the LRT, the coefficient of determination of plot effects was practically nil, which can explain the minor environmental heterogeneity between plots (Alves & Resende, 2008ALVES, R.M.; RESENDE, M.D.V. de. Avaliação genética de indivíduos e progênies de cupuaçuzeiro no estado do Pará e estimativas de parâmetros genéticos. Revista Brasileira de Fruticultura, v.30, p.696-701, 2008. DOI: https://doi.org/10.1590/S0100-29452008000300023.
https://doi.org/10.1590/S0100-2945200800...
).

Table 2.
Estimates of variance components and genetic parameters for the traits average number of fruit per plant and average fruit production per plant, evaluated in an experimental trial of full-sib cupuaçu (Theobroma grandiflorum) families(1).

The high estimates for average progenies heritability (Table 2) reinforce the potential for genetic selection (Rosado et al., 2012ROSADO, A.M.; ROSADO, T.B.; ALVES, A.A.; LAVIOLA, B.G.; BHERING, L.L. Seleção simultânea de clones de eucalipto de acordo com produtividade, estabilidade e adaptabilidade. Pesquisa Agropecuária Brasileira, v.47, p.964-971, 2012. DOI: https://doi.org/10.1590/S0100-204X2012000700013.
https://doi.org/10.1590/S0100-204X201200...
). Moreover, moderate but reasonable values for individual narrow-sense heritability were observed (0.15 < < 0.50) (Resende, 2015RESENDE, M.D.V. de. Genética quantitativa e de populações. Viçosa: Suprema, 2015. 463p.) (Table 2), considering the polygenic control of the traits, which are significantly influenced by the environmental effects. This difference is clear when analyzing the work of Maia et al. (2011)MAIA, M.C.C.; RESENDE, M.D.V. de; OLIVEIRA, L.C. de; ALVES, R.M.; SILVA FILHO, J.L. da; ROCHA, M. de M.; CAVALCANTE, J.J.V.; RONCATTO, G. Análise genética de famílias de meios-irmãos de cupuaçuzeiro. Pesquisa Florestal Brasileira, v.31, p.123-130, 2011. DOI: https://doi.org/10.4336/2011.pfb.31.66.123.
https://doi.org/10.4336/2011.pfb.31.66.1...
, in which the traits fruit length, which is of oligogenic nature, showed narrow-sense heritability of 64%, while the traits fruit weight showed 16% narrow-sense heritability. When evaluating a population of 370 cupuaçu plants, Alves & Resende (2008)ALVES, R.M.; RESENDE, M.D.V. de. Avaliação genética de indivíduos e progênies de cupuaçuzeiro no estado do Pará e estimativas de parâmetros genéticos. Revista Brasileira de Fruticultura, v.30, p.696-701, 2008. DOI: https://doi.org/10.1590/S0100-29452008000300023.
https://doi.org/10.1590/S0100-2945200800...
found narrow-sense heritability values for the number of fruit close to 25%, which is lower than the value found in the present study; however, they evaluated only four harvests. Machado et al. (2002)MACHADO, G.M.E.; REGAZZI, A.J.; VIANA, J.M.S.; CRUZ, C.D.; GRANATE, M.J. Estimação de parâmetros genéticos de uma população amazônica de cupuaçuzeiro (Theobroma grandiflorum (Willd ex Spreng) Schum). Revista Ceres, v.49, p.13-27, 2002. identified a very strong progeny x harvest interaction in relation to productive traits of the species, suggesting that the behavior of progenies differ from one harvest to another, and it is dependent on environmental factors. In the present study, progenies were evaluated and selected based on the behavior over 11 harvests, thus providing a greater selective accuracy.

The average number of fruit per plant during the 11 analyzed harvests was 13.5, and each plant produced the average of 18.0 kg of fruit (Table 3). Five progenies (6, 36, 37, 49, and 52) had the highest genetic values, considering both the number of fruit and total fruit production per plant (Table 3). These progenies showed phenotypic values for average fruit production greater than 20 kg of fruit per plant per harvest, which resulted in an estimated 8 Mg ha-1 fruit, considering the density of 400 plants ha-1. This value is similar to the yield obtained by the cultivar BRS Carimbó eight years after cultivation (Alves & Ferreira, 2012ALVES, R.M.; FERREIRA, F.N. BRS Carimbó: a nova cultivar de cupuaçuzeiro da Embrapa Amazônia Oriental. Belém: Embrapa Amazônia Oriental , 2012. 232p. (Embrapa Amazônia Oriental. Comunicado técnico, 232). Available at: <Available at: https://www.infoteca.cnptia.embrapa.br/bitstream/doc/918443/1/COM232.pdf >. Accessed on: Nov. 18 2020.
https://www.infoteca.cnptia.embrapa.br/b...
).

Table 3.
Predicted genetic values for the traits average number of fruit per plant, average fruit production per plant, and rate of Moniliophthora perniciosa infection evaluated in an experimental trial of full-sib cupuaçu (Theobroma grandiflorum) families.

Progenies 6, 37, and 49 showed low rates of damage caused by M. perniciosa (the causal agent of witches’ broom disease), at less than 15% (Table 4), while 20% of the plants of progenies 36 and 52 were symptomatic. It is worth noting that for four of the five selected progenies, clone 174 ('BRS Coari') was the maternal parent (Table 3). In previous studies, this clone stood out as an excellent source of resistance not only to M. perniciosa, but also to progressive cupuaçu death, caused by the fungus Lasiodiplodia theobromae (Alves et al., 2018bALVES, R.M.; BENCHIMOL, R.L.; OLIVEIRA, R.P. de; CHAVES, S.F. da S. Resistência de genótipos de cupuaçuzeiro a Lasiodiplodia theobromae. Belém: Embrapa Amazônia Oriental, 2018b. 19p. (Embrapa Amazônia Oriental. Boletim de pesquisa e desenvolvimento, 128). Available at: <Available at: https://ainfo.cnptia.embrapa.br/digital/bitstream/item/187910/1/TC-04-18-BPD-128-V03.pdf >. Accessed on: Nov. 18 2020.
https://ainfo.cnptia.embrapa.br/digital/...
). In studies on the cupuaçu genotype selection, the resistance to M. perniciosa is extremely important. One of the highest costs associated with maintaining an orchard is related to the control of this disease (Souza, 2007SOUZA, A. das G.C. de (Ed.). Boas práticas agrícolas da cultura do cupuaçuzeiro. Manaus: Embrapa Amazônia Ocidental, 2007. 56p.), as there is a need for constant vigilance, phytosanitary pruning, and application of fungicides. Therefore, the genetic improvement of cupuaçu through the selection of individuals resistant to these two diseases is the most sustainable option, as it is more economically viable and has no environmental impact (Furlan et al., 2010FURLAN, C.R.C.; DANTAS, A.C.M.; DENARDI, F.; BECKER, W.F.; MANTOVANI, A. Resistência genética dos acessos do banco de germoplasma de macieira da Epagri à mancha foliar de Glomerella (Colletotrichum gloeosporioides). Revista Brasileira de Fruticultura, v.32, p.507-514, 2010. DOI: https://doi.org/10.1590/S0100-29452010000200022.
https://doi.org/10.1590/S0100-2945201000...
).

Table 4.
Individuals selected for clonal propagation with the genetic values and genetic gains of clones (kg per plant), and genetic values and genetic gains of genitors (kg per plant), based on average fruit production per plant (kg) and productive period of cupuaçu (Theobroma grandiflorum).

Another nine progenies (4, 5, 8, 9, 13, 21, 22, 23, and 43) had genetic values similar to those of the five progenies mentioned above for the trait fruit production; however, these progenies showed lower values for the number of fruit per plant. This can be explained by the fact that they have larger and heavier fruit, but produce relatively few fruit. Progenies 4, 5, 8, 21, and 23 are of particular interest, as they show low rates of witches’ broom disease symptoms (Table 3). Progenies 4 and 23 also call special attention, as they include the 'Sekó' genotype, which is a new source of resistance to M.pernicious that is geographically different from those currently being developed in this breeding program, thus contributing to the pyramidization of resistance genes. The hybrids obtained through crosses using the cultivars 'BRS Coari' (174) and 'BRS Manacapuru' (215) reinforce the importance of these progenies for the breeding program, as crosses based on more productive clones may produce genetic materials that maintain the resistance of these genotypes, while incorporating the productivity of the third parent.

The above mentioned progenies showed few plants with symptoms of witches’ broom disease over the 14 years of the experiment, thus providing the evidence of good levels of field resistance (Table 3). However, most ortets with symptoms were from progenies 13 and 43, reflecting high susceptibility to M. pernicious. For progeny 13, this behavior was expected, since both parents showed susceptibility to the disease (Alves et al., 2009ALVES, R.M.; RESENDE, M.D.V. de; BANDEIRA, B. dos S.; PINHEIRO, T.M.; FARIAS, D.C.R. Evolução da vassoura-de-bruxa e avaliação da resistência em progênies de cupuaçuzeiro. Revista Brasileira de Fruticultura, v.31, p.1022-1032, 2009. DOI: https://doi.org/10.1590/S0100-29452009000400015.
https://doi.org/10.1590/S0100-2945200900...
). The objective of this crossing was to concentrate productivity genes from both parents. Thus, despite its susceptibility, it may be interesting in the future to select at least one ortet with high fruit production within this family to be used in hybridization with resistant genotypes. However, the behavior of progeny 43 was unexpected. Although the male parent (clone 12) was highly susceptible, the other parent (clone 220) showed good resistance in other crossings (progenies 9, 11, 17, and 38). From this, it can be concluded that the susceptibility genes of the second parent (clone 12) prevailed in those progenies. According to Alves et al. (2009)ALVES, R.M.; RESENDE, M.D.V. de; BANDEIRA, B. dos S.; PINHEIRO, T.M.; FARIAS, D.C.R. Evolução da vassoura-de-bruxa e avaliação da resistência em progênies de cupuaçuzeiro. Revista Brasileira de Fruticultura, v.31, p.1022-1032, 2009. DOI: https://doi.org/10.1590/S0100-29452009000400015.
https://doi.org/10.1590/S0100-2945200900...
, genes related to witches’ broom resistance in cupuaçu are in heterozygosis, which is why parents that are resistant may produce progenies that are susceptible to the disease.

Hybridization, the method used to produce the progenies of the present study, seeks to consolidate the favorable alleles present in two genitors into a single individual (Baldissera et al., 2014BALDISSERA, J.N. da C.; VALENTINI, G.; COAN, M.M.D.; GUIDOLIN, A.F.; COIMBRA, J.L.M. Fatores genéticos relacionados com a herança em populações de plantas autógamas. Revista de Ciências Agroveterinárias, v.13, p.181-189, 2014.). In the present work, productive and low-resistance genotypes were crossed with resistant genotypes, but the results were unsatisfactory for productivity. The choice of genetically distinct genitors may increase the efficiency of crosses.

After the identification of the superior progenies, the best individuals were identified and selected. In order to maintain the genetic variability in the population, and to guarantee a broad genetic base, two ortets per progeny were selected. Individuals were selected based on the genetic and genotypic values, excluding individuals whose progenies had high incidence rates of M. pernicious (Table 4). No discrepancies were found between the two lists of selected individuals. That is, the same individuals selected on the basis of genotypic values were also selected on the basis of genetic values. Similar results were obtained by Alves et al. (2010)ALVES, R.M.; RESENDE, M.D.V. de; BANDEIRA, B. dos S.; PINHEIRO, T.M.; FARIAS, D.C.R. Avaliação e seleção de progênies de cupuaçuzeiro (Theobroma grandiflorum), em Belém, Pará. Revista Brasileira de Fruticultura, v.32, p.204-212, 2010. DOI: https://doi.org/10.1590/S0100-29452010005000010.
https://doi.org/10.1590/S0100-2945201000...
. The production from the ten clones originating from these individuals can provide an mean gain of 7.33 kg of fruit per plant, which corresponds to 40% increase over the original population. If these clones are used to establish a seed orchard, a gain of 6.15 kg of fruit per plant is expected, corresponding to 34% increase in relation to the initial situation. According to Alves et al. (2010)ALVES, R.M.; RESENDE, M.D.V. de; BANDEIRA, B. dos S.; PINHEIRO, T.M.; FARIAS, D.C.R. Avaliação e seleção de progênies de cupuaçuzeiro (Theobroma grandiflorum), em Belém, Pará. Revista Brasileira de Fruticultura, v.32, p.204-212, 2010. DOI: https://doi.org/10.1590/S0100-29452010005000010.
https://doi.org/10.1590/S0100-2945201000...
, the use of clones as planting material narrows the genetic base, therefore, planted populations should always consist of five or more genotypes, in order to avoid the risk of epidemics caused by the fungus M. perniciosa. This precaution also applies to the selection of clones used as progenitors which, through interbreeding, will produce seed with a broad genetic base.

As to the production period, two selected individuals were considered early, four were regular, and four, late. This balancing of the productive season is important to avoid the concentration of production in a single period of the year, which complicates the logistics of the agroindustry and reduces the price paid to the producer due to excess supply (Hojo et al., 2007HOJO, R.H.; CHALFUN, N.N.J.; HOJO, E.T.D.; VEIGA, R.D.; PAGLIS, C.M.; LIMA, L.C.O. Produção e qualidade dos frutos da goiabeira ‘Pedro Sato’ submetida a diferentes épocas de poda. Pesquisa Agropecuária Brasileira, v.42, p.357-362, 2007. DOI: https://doi.org/10.1590/S0100-204X2007000300008.
https://doi.org/10.1590/S0100-204X200700...
).

A good adaptability of the tested progenies to AFS conditions was observed due to the seasonal pattern of fruit production (Table 4). Thus, it was indirectly observed that, along with favorable agronomic traits, the genotypes offer tolerance to the conditions present in AFS environments, such as the competition for light, water, and nutrients. Nevertheless, attention should be paid to the choice of the species that will be used in consortium with cupuaçu. Alves et al. (2018a)ALVES, R.M.; BASTOS, A.J.R.; CHAVES, S.F. da S.; FERNANDES, J.R.Q. Spondias mombin and Theobroma grandiflorum in agroforestry system: productivity implications. Revista Brasileira de Fruticultura, v.40, e-061, 2018a. DOI: https://doi.org/10.1590/0100-29452018061.
https://doi.org/10.1590/0100-29452018061...
, when studying the interaction of taperebazeiro (Spondias mombin L.) with cupuaçu in an AFS, reported the viability of the consortium due to the fact that no significant losses were observed in the production of cupuaçu fruit. When choosing the species that will compose the AFS, plants that exploit different strata, both above and below ground, are recommended to avoid competition for light, nutrients, and water (Condé et al., 2013CONDÉ, T.M.; LIMA, M.L.M. de; LIMA NETO, E.M. de; TONINI, H. Morfometria de quatro espécies florestais em sistemas agroflorestais no munícipio de Porto Velho, Rondônia. Revista Agro@mbiente On-line, v.7, p.18-27, 2013. DOI: https://doi.org/10.18227/1982-8470ragro.v7i1.932.
https://doi.org/10.18227/1982-8470ragro....
). As to this fact, competition with bacuri was probably mitigated by the fact that grafted seedlings were used, which promotes slower growth than seminal seedlings and produces smaller and more compact plants. As there is economic interest in both species, this consortium is advantageous for producers because it combines two potential products of Amazonian fruit culture (Porte et al., 2010PORTE, A.; REZENDE, C.M.; ANTUNES, O.A.C.; MAIA, L.H. Redução de aminoácidos em polpas de bacuri (Platonia insignis Mart), cupuaçu (Theobroma grandiflorum Willd ex-Spreng Schum) e murici (Byrsonima crassifolia L.) processado (aquecido e alcalinizado). Acta Amazonica, v.40, p.573-578, 2010. DOI: https://doi.org/10.1590/S0044-59672010000300017.
https://doi.org/10.1590/S0044-5967201000...
). In addition, both are native species, which increases the likelihood of success due to their adaptability to Amazonian conditions.

Conclusions

  1. The agroforestry system allows of the discrimination of the most adaptable cupuaçu (Theobroma grandiflorum) tree genotypes.

  2. Cupuaçu tree progenies 6 (174 x 184), 36 (174 x M45), 37 (186 x M138), 49 (174 x Hans 1), and 52 (174 x 217), are the ones that best adapt to the environment of an agroforestry system due to their agronomic traits, under competitive conditions.

  3. Ten matrices show agronomic potential and indirect adaptation to the agroforestry system, and they should be used as clonal cupuaçu cultivars in this environment.

Acknowledgments

To Conselho Nacional de Desenvolvimento Científico e Tecnológico (CNPq), to Coordenação de Aperfeiçoamento de Pessoal de Nível Superior (Capes, Finance Code 001), to Fundação de Amparo à Pesquisa do Estado de Minas Gerais (Fapemig), and to Embrapa Amazônia Oriental, for financial support; to José Quadros, José Oliveira, and Antônio Fontel, for the years of great labor; and to the rural producer Michinori Konagano, for the partnership.

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Publication Dates

  • Publication in this collection
    22 Feb 2021
  • Date of issue
    Jan-Dec 2021

History

  • Received
    10 July 2020
  • Accepted
    02 Dec 2020
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