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Ocean and Coastal Research, Volume: 70 Supplement 2, Published: 2022
  • A multidisciplinary approach for studying deep-sea habitats in Santos Basin Editorial

    Bendia, Amanda G.; Carrerette, Orlemir
  • Chemical characterization of deep-sea corals from the continental slope of Santos Basin (southeastern Brazilian upper margin) Original Article

    Trevizani, Tailisi Hoppe; Nagai, Renata Hanae; Figueira, Rubens Cesar Lopes; Sumida, Paulo Yukio Gomes; Mahiques, Michel Michaelovitch de

    Abstract in English:

    Abstract Carbonate mounds and pockmarks are geologically and ecologically important features distributed worldwide in the world’s oceans. In the present study, we present a chemical characterization of deep-sea scleractinian coral skeletons collected in these geomorphological areas at the southeastern continental margin of Brazil. Coral samples were collected from ten sampling stations during cruises aboard the R/V Alpha Crucis, in 2019. Three species of scleractinian corals were studied: Enallopsammia rostrata, Solenosmilia variabilis, and Desmophyllum pertusum. Stable isotopes of carbon and oxygen (δ13C and δ18O), metals, and phosphorus present in the coral carbonate skeletons were analyzed. Corals are recognized as archives of physical-chemical variations in the marine environment, and the Element/Ca ratios, δ13C, and δ18O allowed for the characterization of the studied areas. Chemical composition found in pockmark areas indicated affinity to terrigenous and particulate materials input (Ba/Ca, Fe/Ca, Mn/Ca, Li/Ca, and Mg/Ca). Greater availability of nutrients and anthropogenic materials (Pb/Ca, Cd/Ca, Zn/Ca, and P/Ca) is also likely to occur in this region, with some elemental ratios higher than those measured in other oceans. These mounds can act as barriers for metals from land flows. Also, corals benefit from a higher food supply due to stronger currents. The corals at the top of the Alpha Crucis Carbonate Ridge receive significant marine influence. Most coral samples have carbonate of aragonitic origin, except for a specimen of D. pertusum, which presented carbonate of biogenic calcite and aragonite. The results demonstrate the potential of scleractinian corals in the chemical characterization of the deep ocean and the need for further investigation of carbonate mound areas from the SW Atlantic.
  • Characterization of the organic matter in pockmark areas of the Southwestern Atlantic upper slope Original Article

    Lourenço, Rafael André; Kunrath, Nathalia Araujo; Nagaoka, Doris; Magalhães, Caio Augusto; Pereira, Antonio Derley de Sousa; Sotão Neto, Basílio Magno Tavares; Timoszczuk, Cristian Taboada; Santos, Felipe Rodrigues dos; Pedrão, Guilherme Augusto; Araujo, Lígia Dias de; Nascimento, Lorena Sampaio; Carvalho, Nayara Ferreira; Silva, Josilene da; Taniguchi, Satie; Mahiques, Michel Michaelovitch de; Bícego, Márcia Caruso; Sumida, Paulo Yukio Gomes

    Abstract in English:

    Abstract Pockmarks are circular or elliptical structures formed at the seabed by the expulsion of gas from the subsurface. They are widely distributed along the continental margin off southeastern Brazil and can be over a kilometer wide and 100 meters deep. However, studies concerning the organic characteristics of these pockmark areas are scarce. This study sought to evaluate the organic composition of the sedimentary matter in pockmark areas located in the continental slope region of the southern Brazilian coast. Hydrocarbons, sterols, long-chain alcohols, stable isotopes of C and N, total organic carbon, and total nitrogen were assessed to provide an organic molecular characterization of the pockmarks located in the Southwestern Atlantic Ocean. These compounds did not reflect the organic characteristics of the scape of fluids that generate pockmark structures.
  • Sedimentation in the adjacencies of a southwestern Atlantic giant carbonate ridge Original Article

    Santos, Rosangela Felicio dos; Kim, Bianca Sung Mi; Trevizani, Tailisi Hoppe; Oliveira, Rodrigo Udenal de; Maly, Mascimiliano; Ramos, Raissa Basti; Figueira, Rubens Cesar Lopes; Mahiques, Michel Michaelovitch de

    Abstract in English:

    Abstract Although carbonate mounds have been investigated for 100 years, few studies focus on the giant variety. The Alpha Crucis Carbonate Ridge (ACCR), a ~17 x 12-km ring-shaped ridge formed by hundreds of mounded structures, located between the 300 and 800-m isobaths and reaching a maximum height of 340 meters above the adjacent seafloor, is the first giant carbonate mounded feature described for the SW Atlantic margin. This study provides the first multiproxy approach to investigate sediments covering the ACCR and its adjacencies. Most of the area is located under the Intermediate Western Boundary Current (IWBC) flow, which carries the nutrient-rich Antarctic Intermediate Water (AAIW). Radiocarbon aging shows pronounced differences for the shallow layers (MIS3 for the top of the mounds and late Holocene for the adjacencies). Grain size data indicate the prevalence of sandy fractions on top of the mounds and muddy sediments in the adjacent areas. Fe/Ca and Ti/Ca proxies allowed for identifying mainly biogenic sedimentation in the area. However, the input of allochthonous terrigenous sediment is necessary for mound buildup, and values of Fe and Ti collected on the top of the mounds are significant. End-Members distributions and metal concentrations also allowed for recognition of distinct sources of sediment. εNd and Ln(Fe/K) indicated two primary terrigenous sources, the Precambrian rocks of the Brazilian shield (Cabo Frio end-member) and the multiple lithologies drained by the Rio de la Plata basin. Redox condition proxies indicated that the area is submitted to oxic conditions, probably reflecting the action of the IWBC. This work provides the first insight into an integrated grain-size and geochemical characterization of the Alpha Crucis Carbonate Ridge (southwestern Atlantic margin).
  • Methane-related community of a carbonate-enriched pockmark, Brazilian Southeastern continental slope Original Article

    Nakamura, Fernanda Mancini; Lourenço, Rafael Andre; Magalhães, Caio Augusto; Bendia, Amanda Gonçalves; Butarelli, Ana Carolina de Araújo; Passos, Julia Gasparini; Soares, Luiza Ferreira; Ramos, Raissa Basti; Trevizani, Tailisi Hoppe; Signori, Camila Negrão; Mahiques, Michel Michaelovitch de; Sumida, Paulo Yukio Gomes; Pellizari, Vivian Helena

    Abstract in English:

    Abstract Pockmarks are geological features that often sustain hydrocarbon-related communities of microorganisms when active, seeping oil or methane. Microbial communities of inactive pockmarks have not been well studied until the present. Plenty of pockmarks in the Southwestern Atlantic Ocean have been discovered. However, no information is available about the organic characteristics in association with the microbial diversity related to methane and non-methane hydrocarbon consumption. This study examined the identity and potential ecology of the methane-related microbial community in an inactive SW Atlantic Carbonate-enriched Pockmark (SWACP). Undisturbed sediment cores were enriched with CH4 99.5% at 5°C, with samples harvested at 16h, 120h, 240h, 720h, and 960h, followed by metataxonomics functional prediction, and the correlation of microbial groups with incubation and enrichment types. The SWACP is depleted in organic compounds, and chemosynthetic production is dominant. Incubated mini-cores of sediment were affected by incubation time and enrichment type, which influenced the microbial composition. Although several taxa were shared among all sediment samples, specific groups per enrichment type and incubation time were observed. These communities comprised taxa previously reported in marine bottom waters, carbonate crusts, active cold-seeps, and inactive pockmarks. The methane-enriched taxa were predominantly related to aerobic methanotrophy, methylotrophy, aerobic and anaerobic non-methane hydrocarbon degradation, and fermentation. This study brings the first survey of the key microbial groups in methane fluxes of a Brazilian deep-sea pockmark, providing data for understanding the ecology surrounding the SW Atlantic gas field areas.
  • Macrobenthic assemblages across deep-sea pockmarks and carbonate mounds at Santos Basin, SW Atlantic Original Article

    Carrerette, Orlemir; Güth, Arthur Z.; Bergamo, Gilberto; Souza, Bruno H. M.; Banha, Thomás N. S.; Nagata, Paula D.; Metzker, Julia; Souza, André Calloni; Ramos, Raíssa Basti; Sumida, Paulo Y. G.

    Abstract in English:

    Abstract The SE Brazilian continental margin is rich in geomorphological features that create different seascapes, where diverse benthic communities thrive. The seafloor is composed of a mixture of pockmarks of different sizes and shapes and tall carbonate mounds that may form extensive chains. Mounds are colonized by deep-water corals which are the main responsible organisms promoting growth over geological time. Depressions and mounds affect the benthic ecosystem in multiple ways owing to water flow, sedimentation rates and food availability. This paper presents new data on macrofaunal composition and community structure associated with deep-sea coral habitats and pockmark areas along the upper continental slope of Santos Basin. Ten sites were sampled using a 0.25 m2 box corer on board R/V Alpha-Crucis, totaling 27 sediment samples. A total of 182 taxa were found, including new records for the Southwestern Atlantic, as well as several potential new species to science. In general, we observed an association of the macrobenthic fauna with the geomorphology of the area and the most important variables, mainly substrate composition and water flux. The abundance, taxonomic composition and also the feeding modes varied across the deep-water coral sites and pockmarks, reflecting in a mosaic of benthic habitats. As deep-sea corals and pockmarks are extremely sensitive to anthropogenic influence and natural shifts, in addition to the economic value associated to fisheries, this study provides baseline information on these special habitats in Santos Basin that can be used for future research, monitoring activities, and conservation strategies.
  • First description of archaeal communities in carbonate-rich seafloor and subseafloor sediments from the Southwestern Atlantic slope Original Article

    Bendia, Amanda Gonçalves; Nakamura, Fernanda Mancini; Butarelli, Ana Carolina de Araújo; Kmit, Maria Carolina Pezzo; Ramos, Raissa Basti; Signori, Camila Negrão; Lourenço, Rafael Andre; Mahiques, Michel Michaelovitch de; Sumida, Paulo Yukio Gomes; Pellizari, Vivian Helena

    Abstract in English:

    Abstract Deep-sea sediments comprise one of the largest habitats on Earth. The archaeal groups contribute to a large fraction of the deep-sea benthic biomass, playing a key role in biogeochemical cycles. However, their diversity in deep-sea benthic ecosystems remains poorly understood, mostly because only recently novel taxa have been proposed, thus remodeling the phylogenetic tree. Despite the dificulty in obtaining cultivated representatives, the metabolic capabilities of archaea have lately been described through metagenomic data, indicating that archaeal taxa are highly versatile. Here, we aimed to reveal the diversity of archaeal communities in surface (0 to 15 cm depth) and subsurface (200 cm depth) sediments from a carbonate-rich region in the Southwestern Atlantic upper slope. We performed 16S rRNA gene sequencing, and found that the archaeal composition in surface sediments was mainly dominated by ammonia-oxidizing archaea within Nitrososphaeria class. The distribution of Nitrososphaeria ASVs (amplicon sequence variants) indicates the presence of several species or ecotypes. Contrastingly, the subsurface sediment was dominated by uncultivated anaerobic and poorly known archaea, including representatives of all supergroups (Asgard, TACK, DPANN and Euryarchaeota). These archaea have been described as having potentially diverse metabolic capabilities, including autotrophic and heterotrophic pathways, such as acetogenesis, methylotrophy, and degradation of labile and recalcitrant organic compounds. This indicates an important role in the remineralization of organic matter in the SW (Southwest) Atlantic slope. They are likely enriched due to the transport and mixing of sediments by the IWBC (Intermediate Western Boundary Current) along the continental slope. However, further studies are needed to reveal the geochemical and oceanographic drivers of the archaeal distribution. This study provides the first description of the archaeal communities in carbonate-rich sediments in the SW Atlantic slope, and adds new biodiversity insights to this geological feature, which is considered a vulnerable marine ecosystem, thus helping for future conservation strategies.
  • Contribution of chemoautotrophy and heterotrophy to the microbial carbon cycle in the Southwestern Atlantic Ocean Original Article

    Passos, Julia Gasparini; Soares, Luiza Ferreira; Sumida, Paulo Yukio Gomes; Bendia, Amanda Gonçalves; Nakamura, Fernanda Mancini; Pellizari, Vivian Helena; Signori, Camila Negrão

    Abstract in English:

    ABSTRACT Dark carbon fixation (DCF) is a source of new and labile carbon in the deep ocean, while heterotrophic microbial production (HMP) promotes organic matter transfer through the microbial loop. Despite their ecological relevance, there is a scientific gap regarding the estimates of DCF and HMP in the Southwestern Atlantic Ocean. Thus, the aim of this study was to investigate the spatial distribution of DCF and HMP; their relevance to the ocean carbon cycle; their relationship with environmental parameters and amongst themselves on the upper slope of Santos Basin. The samples were collected at three different water depths and sediment layers aboard the R/V Alpha Crucis in November 2019. DCF and HMP rates were measured by 14C-bicarbonate and 3H-leucine incorporation, respectively, and incubated in the dark. In the water column, DCF rates varied from 1.51 x 101 to 3.24 x 102 µg C m-3 h-1, which were one to two orders of magnitude lower than the HMP rates, from 1.26 x 102 to 1.48 x 104 µg C m-3 h-1. In the sediments, the DCF ranged from 1.15 x 104 to 1.83 x 105 µg C m-3 h-1, while HMP was one to four orders of magnitude lower, 3.22 x 101 to 1.56 x 103 µ gC m-3 h-1. DCF rates were significantly higher in the sediments, due to a higher availability of energy sources than in the oligotrophic water above. The HMP had higher rates in the water column as it is deeply dependent on organic matter derived from photosynthesis. This is the first study to investigate DCF and HMP considering the water column and sediments of the Southwestern Atlantic Ocean, thus contributing to a better understanding of the microbial role in the marine carbon cycle and ecosystem functioning.
  • ABYSSAL Database: an integrated WebGIS platform for deep-sea information from the South Atlantic Brief Communication

    Bergamo, Gilberto; Carrerette, Orlemir; Souza, Bruno H. M.; Banha, Thomás N. S.; Nagata, Paula D.; Corrêa, Paulo V. F.; Güth, Arthur Z.; Sumida, Paulo Y. G.

    Abstract in English:

    ABSTRACT South Atlantic deep waters provide a huge diversity of habitats, with variations in areas such as geology, macrofauna, microbiology, physics, and chemistry. However, most of the data lacks central organization, important for subsequent deep-sea research, especially considering the multidisciplinary approaches and comparisons of the South Atlantic with other oceanic basins. Given the rising interest in commercial exploration off the deep-sea, especially with respect to hydrocarbon extraction and mining, there is an urgent need for a centralized repository of information with tools to collect and share geospatial data to support the conservation of this important oceanographic region. The main objective of this manuscript is to present an integrative database in WebGIS format for South Atlantic deep waters, open to further development in terms of data input, reliant on researcher collaboration, and with tools for ongoing maintenance and usability improvement driven by user feedback. The WebGIS format provides an open access, cost-free, feature-rich, and easy to use database through any Internet browser to reach the greatest number of researchers and students possible. The ABYSSAL database can be accessed at http://abyssal.io.usp.br.
  • Seep hunting in the Santos Basin, Southwest Atlantic: sampling strategy and employed methods of the multidisciplinary cruise BIOIL 1 Methods

    Sumida, Paulo Y. G.; Pellizari, Vivian H.; Lourenço, Rafael A.; Signori, Camila N.; Bendia, Amanda G.; Carrerette, Orlemir; Nakamura, Fernanda M.; Ramos, Raissa B.; Bergamo, Gilberto; Souza, Bruno H. M.; Butarelli, Ana C. A.; Passos, Júlia G.; Dias, Rodolfo J. S.; Maly, Mascimiliano; Banha, Thomás N. S.; Güth, Arthur Z.; Soares, Luiza F.; Perugino, Paula D. N.; Santos, Felipe R.; Santana, Frederico R.; Mahiques, Michel M. de

    Abstract in English:

    Abstract The continental margin off the southeastern Brazilian coast is punctuated by a series of geological-geomorphological features, such as subsurface saline diapirs and pockmarks at the seafloor interface, which evidence the abundant presence of oil and gas in the region. In several of these sites, hydrocarbons can be naturally released into the water column, areas are cold seep areas. These are marked by the presence of oil- and gas-dependent ecosystems, where specific organisms are able to fix carbon from hydrocarbon chemosynthesis. In addition, light hydrocarbon fluid flow through the sediment may build up authigenic carbonates that can be further colonized by cold-water corals, generating large carbonate mounds over geological time, normally positioned at the border of these pockmark features. The present work reports on a multidisciplinary oceanographic cruise carried out in the Santos Basin, SW Atlantic, to seek, map, and collect geological, chemical, and biological data from different deep-sea habitats. The cruise occurred in November 2019 on the R/V Alpha Crucis of the Oceanographic Institute of the University of São Paulo (IOUSP). We intended to discover and detail different geomorphological features, characterize free-living and symbiotic microorganisms, determine the chemosynthetic rates in relation to heterotrophic microbial production, and characterize the fauna and study their ecological and evolutionary links within and across ocean basins. All discoveries made during the cruise and their respective results will be presented separately in several papers that comprise this special volume.
Instituto Oceanográfico da Universidade de São Paulo Praça do Oceanográfico 191, CEP: 05508-120, São Paulo, SP - Brasil, Tel.: (11) 3091-6501 - São Paulo - SP - Brazil
E-mail: diretoria.io@usp.br